BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg917308
Length=1728
Score E
Sequences producing significant alignments: (Bits) Value
AT5G56160.1 | Symbols: | Sec14p-like phosphatidylinositol tran... 2401 0.0
AT1G55690.1 | Symbols: | Sec14p-like phosphatidylinositol tran... 387 3e-106
> AT5G56160.1 | Symbols: | Sec14p-like phosphatidylinositol transfer
family protein | chr5:22731974-22735590 FORWARD LENGTH=2191
Length=2191
Score = 2401 bits (1300), Expect = 0.0
Identities = 1590/1726 (92%), Gaps = 35/1726 (2%)
Strand=Plus/Plus
Query 1 ATGTCAGGTCGTGAACAAACAGGAGAGAAACTATCAGATTCTGAGTGCATAGAAGAAGAG 60
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 248 ATGTCAGGTCGAGAACAAACAGGAGAGAAACTATCAGATTCTGAGTACATAGAAGAAGAG 307
Query 61 CCACGGCGTTCTAGAATCGGGAATTTGAAGAAGAAGGCTATTACTTGTTCAAGTAAACTT 120
||||||||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||
Sbjct 308 CCACGGCGTTCTAGAATTGGGAATTTGAAGAAGAAGGCTTTTAGTTGTTCAACTAAACTT 367
Query 121 ACTCATCCTTTG-A-A-GAGAAAAGGCAAACGTAAAATCG------AGCTTCCTTTTATT 171
|| ||||||||| | | ||||||||||||||||||||||| || ||||||| |||
Sbjct 368 ACACATCCTTTGAAGATGAGAAAAGGCAAACGTAAAATCGATTTCCAGATTCCTTTGATT 427
Query 172 GAAGATGTTAGGGATGAGAAAGATGAGAAGATTGTTTCTAAATTGCGTCAAGAACTTCTT 231
||||||||||| ||||||||||| |||||| |||||||||||||||||||| ||||||||
Sbjct 428 GAAGATGTTAGAGATGAGAAAGAGGAGAAGCTTGTTTCTAAATTGCGTCAACAACTTCTT 487
Query 232 AAGAAAGATTTGTTGCCTCCAACGCATGATGATTATCATATGTTGTTGAGGTTTCTGAAA 291
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 488 CAGAAAGATTTGTTGCCTCCAGTACATGATGATTATCATATGTTGTTGAGGTTTCTGAAA 547
Query 292 ACAATGGAATTCAAAATCGAGAAAACTGTCACTGCATGGGAAGATATGCTCAAATGGAGG 351
|||||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||
Sbjct 548 ACAATGGAATTCAAAATCGAGAAAACTGTCACGGCATGGGAGGAAATGCTTAAATGGAGG 607
Query 352 AAAGAATTTGCAACTGACCGCATTATACAGGATTTTAATTTCAAAGAGTTGGACCAAGTG 411
|||||||||| ||| || ||||||||||||||||| ||||||||||||||||| |||||
Sbjct 608 AAAGAATTTGGAACCGATCGCATTATACAGGATTTCAATTTCAAAGAGTTGGATGAAGTG 667
Query 412 ACACGGCACTATCCTCAAGGGTATCATGGAGTTGATAAGGATGGGAGACCTATTTATATC 471
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 668 ACAAGGCACTATCCTCAAGGGTATCATGGAGTTGATAAAGATGGGAGACCTATTTATATC 727
Query 472 GAAAGACTTGGAAAAGCTCATCCTGGTAAGCTTATGGAGGTTACTACCATAGAGCGATAT 531
|| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 728 GAGAGACTTGGAAAAGCTCATCCTGGTAAACTTATGGAGGTTACTACTATAGAGCGATAC 787
Query 532 TTGAAGTACCATGTACAAGAATTTGAGAGGACACTTCAAGAGAAGCTCCCTGCGTGTTCA 591
|||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 788 TTGAAGTACCATGTTCAAGAATTCGAGAGGACACTTCAAGAGAAGCTACCTGCGTGTTCA 847
Query 592 GTTGCAGCTAAGCGACGAGTTACTACAACAACTACGATTCTAGATGTTGAAGGCTTGGGT 651
|||||||||||| |||||||||||||||| ||||| || ||||||||||||||| |||||
Sbjct 848 GTTGCAGCTAAGAGACGAGTTACTACAACTACTACAATACTAGATGTTGAAGGCCTGGGT 907
Query 652 ATGAAGAACTTTACTCCTACAGCTGCTAATCTCCTGGCCACCATTGCTAAAGTAGATTGC 711
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 908 ATGAAGAACTTTACTCCTACCGCTGCTAATCTCCTGGCCACCATTGCTAAAGTTGATTGC 967
Query 712 AATTATTACCCTGAGACTTTGCACCGAATGTTCATTGTCAATGCAGGGATTGGATTCAGG 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 968 AATTATTACCCTGAGACTTTGCACCGAATGTTCATTGTCAATGCAGGGATTGGATTCAGG 1027
Query 772 AATTTTCTTTGGCCTGCCGCACAGAAGCTTGTTGATCCGATGACTATTGCAAAGATACAA 831
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1028 AGTTTTCTTTGGCCTGCCGCACAGAAGCTTCTTGATCCGATGACTATTGCAAAGATACAA 1087
Query 832 GTTTTGGAGCCAAGGTCCTTGTCAAAGTTACTTGAAGCAATTGATTCCAGTCAACTTCCA 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1088 GTTTTGGAGCCAAGGTCCTTGTCAAAGTTACTTGAAGCAATTGATTCCAGTCAACTTCCA 1147
Query 892 GAGTTCTTGGGAGGCTTATGCAAATGTCCTAACGAGGGAGGGTGCTTGAGGTCAAATAAA 951
|| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1148 GAATTCTTGGGAGGCTTATGCAAATGTCCTAACGAGGGAGGGTGCTTGAGGTCTAACAAA 1207
Query 952 GGACCCTGGAATGATCCTGAAATA------CTCATTCATCACATGGAAGTTAATCCTGTA 1005
|||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||
Sbjct 1208 GGACCCTGGAATGATCCTGAAATAGTTGAGCTCGTTCATCACATGGAAGTAAATAATGTA 1267
Query 1006 CCGCAAATCA-CAACAGCTCCTCTTCGTATAAGTGATTATGATTCTTCCACTTGCACGAT 1064
||||||| || ||||||||||||||| | |||| |||||||||||| |||||||||||||
Sbjct 1268 CCGCAAA-CAACAACAGCTCCTCTTCATGTAAGAGATTATGATTCTACCACTTGCACGAT 1326
Query 1065 CCCGCCTAAAGAAAGGTATAACAAAACTTTTAAAGAAGAGCCAGAATCTGAAGAATATTA 1124
| |||||||||||| | ||| ||||||||||||||| |||||||||||||
Sbjct 1327 CTCGCCTAAAGAAA-------C-----TTTGAAAGAAGAGCCAGAACCTGAAGAATATTA 1374
Query 1125 CTCTTCCACTGGGTCAAGATCTTCAATGTACAATTGTTTAGTTCCTTCACTCTCTGATAA 1184
||||||||||||||| |||||||||||| ||| |||| |||||||| |||||||||||||
Sbjct 1375 CTCTTCCACTGGGTCCAGATCTTCAATGCACACTTGTATAGTTCCTCCACTCTCTGATAA 1434
Query 1185 GGCTAGTACATCAGACGGTGATAAAATCATTACTACCGTGGAATCTATAGAACCGGCTCA 1244
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1435 GGCTAGTACATCAGACGGTGATAAATTCATTACTACCGTGGAATCTATAGAATCGGCTCA 1494
Query 1245 ATCCCATAT-ACTTAACACGGACACCGAAAACTCTTTTGCAAATACAACCATAAGAGAAG 1303
|||||| || |||| || |||| || |||||| |||| ||||||||| | |||||||||
Sbjct 1495 ATCCCA-ATTACTTGACGCGGATACTGAAAACACTTTCGCAAATACATCTGTAAGAGAAG 1553
Query 1304 GTGGTCAGATGTTACGGTTTGGTGCACTTAGAGAGAAAATCAACGGCGAGAACATCTTTC 1363
|||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 1554 GTGGTCAGATTTTACGGTTTGGTGCTCTTAGAGAGAAAATCAACAGCGAGAACATCTTTC 1613
Query 1364 ACTTGGTGAAAACACTACTAGCCTTTCCACTGAAGCTATTTGT-CTTCGTTGGTTTCCTA 1422
|||||||||||| |||||||| |||||||||||||||||||| || | |||||||||||
Sbjct 1614 ACTTGGTGAAAATACTACTAGTTTTTCCACTGAAGCTATTTGTTCT-CTTTGGTTTCCTA 1672
Query 1423 TTGCCTGGATACTGGCAAAGACAGAACA-ATGTCGTTGTCCCAGAATCATCAATAAACAA 1481
|| ||||||||||||||||||||||||| | |||||||||||||| || || | ||||||
Sbjct 1673 TTACCTGGATACTGGCAAAGACAGAACACA-GTCGTTGTCCCAGATTCGTCGACAAACAA 1731
Query 1482 CCAGGTTCTCGAGTGTTTAGATCGTCTTAAGAAGATGGAGAAAGAATTCACAGAGATTAG 1541
| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1732 CAAGGTTCTTGAGTGTTTCGATCGTCTTAAGAAGATGGAGAAAGAATTCACAGAGATCAG 1791
Query 1542 TAGAAAACCAGTAAAAATCCCAGAAGCAAATGAGAAGCTCTTAACGGAATCTCTCGAGAG 1601
|||||||| |||||||||||||||||||||||||||||| ||| | |||||||| |||||
Sbjct 1792 TAGAAAACAAGTAAAAATCCCAGAAGCAAATGAGAAGCTATTAGCAGAATCTCTGGAGAG 1851
Query 1602 GATCAAGTCTCTAGAACTCGATCTCGACAAAACCAAATCAGTATTACATATAACATTAAC 1661
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1852 GATCAAGTCTCTAGAACTCGATCTCGACAAAACGAAATCAGTATTACATATAACATTAAC 1911
Query 1662 AAAACAACTTCAGATCACAGAACAGCTTGAATCTCATTACCAAGAA 1707
||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1912 AAAACAACTTCAGATTACAGAACAGCTTGAATCTCAAGACGAAGAA 1957
> AT1G55690.1 | Symbols: | Sec14p-like phosphatidylinositol transfer
family protein | chr1:20808263-20812840 REVERSE LENGTH=2607
Length=2607
Score = 387 bits (209), Expect = 3e-106
Identities = 732/973 (75%), Gaps = 81/973 (8%)
Strand=Plus/Plus
Query 51 AGAAGAAGAGCCACGGCGTTCTAGAATCGGGAATTTGAAGAAGAAGGCTATTACTTG-TT 109
|||||| ||| |||||| || | ||| ||||||||||||||||| || |||| || ||
Sbjct 508 AGAAGATGAGAGACGGCGCTCAAAAATAGGGAATTTGAAGAAGAAAGCCATTA-ATGCTT 566
Query 110 CAAGTAAACTT-ACTCATCCTTTGAAG--A-----GAAAAGGCAAACGT-AAAATCGAGC 160
||| || || |||||| |||||||| | ||||||| ||| | | |||| |
Sbjct 567 CAA-CCAAGTTCACTCATTCTTTGAAGAAACGGGGGAAAAGG-AAAATTGACTATCG-GG 623
Query 161 TTCCT----T-T-TATTGAAGATGTTAGGGATGAGAAAGATGAGAAG-ATTGTTTC-TAA 212
||||| | | ||||||||||| |||||||| ||||| ||| || ||| | | | |
Sbjct 624 TTCCTGCAGTCTCCATTGAAGATGTAAGGGATGAAAAAGAGGAG-AGCGTTG-TGCTTGA 681
Query 213 ATT--G-CGTCAAGAACTTCTTAAGAAAGATTTGTTGCCTCCAACG-CATGATGATTATC 268
||| | ||| ||| |||||| ||| ||||||||| ||||| | | |||||||| || |
Sbjct 682 ATTCCGCCGT-AAG--CTTCTTGAGAGAGATTTGTTACCTCCTA-GACATGATGAGTACC 737
Query 269 ATA-TGTTGTTGAGGTTTCTGAAAACAATGGAAT-TCAAAATCGAGAAAA-CTGTCA-CT 324
||| | || |||||||| ||||| | | || || | || || || |||| | || |
Sbjct 738 ATACTCTT-CTGAGGTTTTTGAAAGCTA-GGGATCTTAACATTGAAAAAACCACCCAGTT 795
Query 325 GCATGGGAAGATATGCTCAAATGGAGGAAAGAATTTGCAACTGA-CCGCATTA-TACAGG 382
| |||||||| ||||| | |||||| ||||| | || || || | || || || |||
Sbjct 796 G--TGGGAAGAAATGCTTAGATGGAGAAAAGAGTATGGGACAGATAC-CA-TACTAGAGG 851
Query 383 ATTTTAATTTCAAAGAG-TTGGACCAAGTGACACGGCACTATCCTCAAGGGTATCATGGA 441
||||| ||||| ||||| || || |||| | ||||||||||||| |||||||||
Sbjct 852 ATTTTGATTTCGAAGAGCTT-GAAGAAGTTTTGCAATACTATCCTCAAGGCTATCATGGA 910
Query 442 GTTGATAAGGATGGGAGACCTATTTATATCGAAAGACTTGGAAAAGCTCAT-CCTGGTAA 500
||||||||||| || |||||| | || || ||||||||||||||||||||| ||| |||
Sbjct 911 GTTGATAAGGAAGGAAGACCTGTCTACATTGAAAGACTTGGAAAAGCTCATCCCT-CTAA 969
Query 501 GCTTATGGAGGT-T-ACTACCATAGAGCGATATTTGAAGTACCATGTACAAGAATTTGAG 558
|||||| | || | || |||||||| ||||||| ||||||||||| ||||| ||||||
Sbjct 970 GCTTAT-G-CGTATCACCACCATAGATAGATATTTAAAGTACCATGTGCAAGAGTTTGAG 1027
Query 559 AGGA-CACTTCAAGAGAAGCTCCCTGCGTGTTCAGTTGCAGCTAAGCGACGAGT-TACTA 616
| || | || || ||||| ||||||| || ||| |||| || ||||| ||| | | |
Sbjct 1028 A-GAGCTCTCCAGGAGAAATTCCCTGCATGCTCAATTGCTGCAAAGCGTCGAATCT-GTT 1085
Query 617 CAACAACTACGATTCTAGATGTTG-AAGGCTTGGGTATGAAGAACTTTACTCCTACAGCT 675
| |||||||| || || |||| || |||| ||||| || ||||||||||| || ||||||
Sbjct 1086 CCACAACTACAATACTGGATG-TGCAAGGATTGGGAATTAAGAACTTTACACCAACAGCT 1144
Query 676 GCTAATCTCCTGGCCACCATTGCT-AAAG-TAGATTGCAATTATTACCCTGAGACTTTGC 733
|| ||||| |||| ||| || | ||| |||| || ||| ||||||||||| ||||
Sbjct 1145 GCAAATCTTGTGGCTGCCA-TG-TCGAAGATAGACAACAGTTACTACCCTGAGACGTTGC 1202
Query 734 ACCGAATGTTCATTGTCAATGCAGGGATTGGATTCAGGAATTTTCTTTGGCCTGCCGCAC 793
|| |||||| |||||| ||||| || | || |||| || | ||||||||||| || |
Sbjct 1203 ACAGAATGTACATTGTAAATGCTGGAACAGGTTTCAAAAAGATGCTTTGGCCTGCTGCTC 1262
Query 794 AGAAGCTTGTTGATCCGATGACTATTGCAAAGATACAAGTTTTGGAG-CCAAGGTCCT-T 851
||||| || ||||| | | ||| |||||||||||||| || | ||| |||| | || |
Sbjct 1263 AGAAGTTTCTTGATGCAAAGACCATTGCAAAGATACACGTGCTAGAGCCCAA-AT-CTCT 1320
Query 852 GTCAAAGTTACTTGAAG-CAATTGATTCCAGTCAACTT-CCAGAGTT-CTTGGGAGGCTT 908
| ||||||| ||||| | |||||||| |||||| || ||||| || ||| ||||| ||
Sbjct 1321 ATTTAAGTTACATGAAGTC-ATTGATTCAAGTCAA-TTGCCAGAATTCCTT-GGAGG-TT 1376
Query 909 -ATGCAAATGTC-CTAACGA--G-GGAGGGTG-CTTGAGGTCAAATAAAGGACCCTGGAA 962
|||| || | | || | |||||||| ||| | || |||||||||||||||||
Sbjct 1377 CATGCTCTTG-CTTTGGTGATGGAGGAGGGTGTCTT-CGCTCTAATAAAGGACCCTGGAA 1434
Query 963 TGATCCTGAAATA 975
|||||||||||||
Sbjct 1435 TGATCCTGAAATA 1447
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85441327590
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5