BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg917356 Length=519 Score E Sequences producing significant alignments: (Bits) Value AT5G56550.1 | Symbols: OXS3, ATOXS3 | oxidative stress 3 | chr5... 782 0.0 > AT5G56550.1 | Symbols: OXS3, ATOXS3 | oxidative stress 3 | chr5:22895616-22896653 REVERSE LENGTH=901 Length=901 Score = 782 bits (423), Expect = 0.0 Identities = 494/526 (94%), Gaps = 14/526 (3%) Strand=Plus/Plus Query 1 ATGTTCAAAGAGATGAATCTGAATCTGAAGCAAATGGGCAACATGATCTATGAAGATCCA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 152 ATGTTCAAAGAGATGAATCTGAATCTGAAGCAAATGGGCAACATGATCTATGAAGATCCA 211 Query 61 ACAAGGATCCAAGAAGAAGA---CATTGTTCAAGGAGTTTCAAGAACATTCTCTGAGGAA 117 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||| ||| Sbjct 212 ACAAGGATCCAAGAAGAAGAAGACATTGTTCAAGAAGTTTCAACAACATTCTCTGATGAA 271 Query 118 GAAGA-AGATTCATCATCTTGTTCATTATCTTCTTCCATGTGTTCTTCATCTGATTTAAC 176 ||||| | | |||||||||||||||||||||||||||||||||||| || | || | | Sbjct 272 GAAGATA-ACTCATCATCTTGTTCATTATCTTCTTCCATGTGTTCTG-AT-T--TT-A-C 324 Query 177 AGAGGATGATGATGATGATG-T-TT-CTTCATCTTCTTCTAATGGACCTCTTGAAGATCT 233 |||||||||||||||||||| | || ||||||||||||| |||||||||||||||||||| Sbjct 325 AGAGGATGATGATGATGATGATGTTTCTTCATCTTCTTCAAATGGACCTCTTGAAGATCT 384 Query 234 CTCTGACCTCATGTCACATCTCCCAATCAAGAGGGGATTATCAAAGTTCTATGAAGGAAG 293 |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 385 CTCTGACCTCATGTCACACCTCCCTATCAAGAGGGGATTATCAAAGTTCTATGAAGGAAA 444 Query 294 ATCTCAATCATTCACATCACTAGCAAATGTTAAAAGCCTTGAAGATCTTATGAAGAGAGG 353 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 445 ATCTCAATCATTCACATCACTAGGAAATGTTAAAAGCCTTGAAGATCTTATGAAGAGAGG 504 Query 354 GTTTAAAAATAGAAACTATGGAGCAAAAAGAAAGTCATCTAGGAGTACTGGAGGGATTTT 413 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 505 GTTTAAAAGTAGAAACTATGGAGCAAAAAGAAAGTCATCTAGGAGTACTGGAGGGATTTT 564 Query 414 AGATCAAAGCTATAAAAGGGTTTATAGTCCTAGAGCTACAATCTCCAAGAAACCCAACAA 473 |||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 565 AGATCAAAGCTACAAAAGGGTTTTTAGTCCTAAAGCTACAATCTCCAAGAAACCCAACAG 624 Query 474 AACACCTTCCTCTGCTCTCTCTTGTCTTGCCAGAAGAAGACCTTAG 519 |||||||||||||| |||||||||||| ||||||||||||| |||| Sbjct 625 AACACCTTCCTCTGTTCTCTCTTGTCTAGCCAGAAGAAGACATTAG 670 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24815668618 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5