BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg917708
Length=1185
Score E
Sequences producing significant alignments: (Bits) Value
AT5G59680.1 | Symbols: | Leucine-rich repeat protein kinase fa... 939 0.0
AT5G59660.1 | Symbols: | Leucine-rich repeat protein kinase fa... 366 2e-100
AT5G59670.1 | Symbols: | Leucine-rich repeat protein kinase fa... 322 5e-87
AT5G59616.1 | Symbols: | Interleukin-1 receptor-associated kin... 200 2e-50
AT2G14440.1 | Symbols: | Leucine-rich repeat protein kinase fa... 196 3e-49
AT2G14510.1 | Symbols: | Leucine-rich repeat protein kinase fa... 185 7e-46
> AT5G59680.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr5:24046792-24050801 FORWARD LENGTH=2664
Length=2664
Score = 939 bits (508), Expect = 0.0
Identities = 959/1172 (82%), Gaps = 50/1172 (4%)
Strand=Plus/Plus
Query 23 ACATCAAAACCACCTATGAAATT-AGTAGAAAT-AGCTGGCAAGGAGATCCATGTGTCCC 80
||||| || ||||||||| |||| ||||| ||| | ||||||| | |||||||| |||||
Sbjct 1115 ACATCCAAGCCACCTATG-AATTGAGTAG-AATCAACTGGCAAAGCGATCCATGCGTCCC 1172
Query 81 TCGGCAGTTTAGGTGGGACGGATTAAACTGCAGCAACACTG--AT-ACGTCTACACCAAG 137
|| ||||||| |||||| || ||||||||||||| ||| | || || | |||||||
Sbjct 1173 TCAACAGTTTATGTGGGATGGTTTAAACTGCAGCATCACAGATATAACCACGCCACCAAG 1232
Query 138 AATCACTTCTTTAAACTTGTCTTCAAGTGGTTTAGCTGGAACCATAGCAGCTGCCATTCA 197
||||||| ||||||||||||| |||||||||||| ||||||| ||| |||||||||||||
Sbjct 1233 AATCACTACTTTAAACTTGTCATCAAGTGGTTTAACTGGAACGATAACAGCTGCCATTCA 1292
Query 198 AAATCTCACGCA-ACTAGAAAAGCTGGACTTGTCCAATAATAATTTGACTGGAGAGGTGC 256
|||||| ||| | ||||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct 1293 AAATCTTACG-ACACTAGAAAAGCTGGACTTGTCGAATAATAACTTGACCGGAGAGGTGC 1351
Query 257 CAGAATTTCTAGGCAACATAAAATCATTGTTGTTCATAAACTTAAGCTGGAACAATCTTA 316
||||||||||| ||||||| ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct 1352 CAGAATTTCTAAGCAACATGAAATCGCTGTTGGTCATAAACTTAAGCGGGAACGATCTTA 1411
Query 317 ATGGTTCAATTCCTCAATCTCTTCAAAAGAAAGGACTGGAATTA-TTTCCTCAAGGGAAC 375
| ||| |||||||||||||||| |||| ||||||||| || || ||| |||||| |||
Sbjct 1412 ACGGTACAATTCCTCAATCTCTACAAAGGAAAGGACTTGAGCTACTTT-ATCAAGGAAAC 1470
Query 376 CCTAGGCTT-TGTCTCTCTGGTTCATGCCTACCATCCAAA-C--GCAA-ATTATTTCCAG 430
|| |||||| | || | |||||||| || | ||||| | |||| | |||||||
Sbjct 1471 CCCAGGCTTATTTC-CCCTGGTTCA--ACT-GAAACCAAATCTGGCAAGA-GCTTTCCAG 1525
Query 431 TGGCAATTGTCGCATCAGTTGCTTCGGTGGCCAGTATTATCATTGCTGTCTTGGTTCTTA 490
| |||| || |||||||||| ||| | |||| | |||| ||| || | ||||||||
Sbjct 1526 TAACAATAGTTGCATCAGTTGGTTCTGCAGCCATTCTTATTGTTG-TG-C-TGGTTCTTG 1582
Query 491 T-TTTTGTTTTCAGAAAGAAAAAGCCGTCAACTGTGGGAGCTCTACAACAGCCACCTAGT 549
| ||| || || |||||||||||||||| |||| | || | | | | || || ||
Sbjct 1583 TACTTT-TTCTCCGAAAGAAAAAGCCGTCGGCTGTTGAAGTTGTTCTCCCGCGTCCAAG- 1640
Query 550 ATATCGCCATCGGTGAATGTTACATATCCTAATTCACCTGAAACATCAATCCAAACGAAT 609
|| |||| || |||||||| | ||| |||| |||||||| | |||||| | | |||
Sbjct 1641 -TA-GGCCAACGATGAATGTTCCTTATGCTAACTCACCTGAGCCGTCAATCGAGATGAAA 1698
Query 610 AAGAGGAGGTTTACTTATTCAGAGGTCACTG-ATATGACAAAAAACTTCCAAAGAGTTGT 668
||||| | |||||||||||||||||| || | | ||||| || || ||| |||||||||
Sbjct 1699 AAGAGAAAGTTTACTTATTCAGAGGTTAC-GAAAATGACTAATAATTTCGGAAGAGTTGT 1757
Query 669 TGGGGAAGGAGGATTCGGTATTGTCTATCACGGTACTCTGAATGGAAATGCACAAGTAGC 728
|||||||||||||| || |||||| || |||||| | ||||| || ||| || ||
Sbjct 1758 AGGGGAAGGAGGATTTGGCGTTGTCTGCCATGGTACTGTAAATGGTTCTGAACAGGTGGC 1817
Query 729 TGTTAAAGTACTCTCTCAATCATCAACTCAAGGCTA-CAAGCAATTCAAGGCAGAAGTAT 787
||||||| |||| || |||||||||||||||||||| ||| | |||||||| || |
Sbjct 1818 TGTTAAACTACTTTCACAATCATCAACTCAAGGCTATAAAG-AGTTCAAGGC---AG-A- 1871
Query 788 GCTTAAAATTTGTTGATCTTCTTCTGAGAGTTCACCATACAAATTTGGTGAGCCTCGTTG 847
| ||||||||||||||||||||||||||||| |||||||| ||||| || |
Sbjct 1872 G----------GTTGATCTTCTTCTGAGAGTTCACCATACGAATTTGGTAAGCCTTGTCG 1921
Query 848 GATATTGTGGCGAAGGAGATCACTTGGCTCTTATCTACGAGTTTGTGCCCAATGGAAACT 907
||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||| |||
Sbjct 1922 GATATTGTGATGAAGGAGACCACTTGGCCCTTATCTACGAGTTTGTACCCAATGGAGACT 1981
Query 908 TAAGACAACATCTGTCAGGAACACGAGGCATATCCAACATCAGCTGGGGTATTCGACTAC 967
||||||||||| |||| |||| | |||| | | ||| | ||| ||||||| ||| |||
Sbjct 1982 TAAGACAACATTTGTCTGGAAAAGGAGGTAAACCCATCGTCAATTGGGGTACTCGGCTAA 2041
Query 968 GAATAGCTTTGGAGGCTGCACTAGGATTGGAATATTTACA-TTCTGGATGCACACCACCA 1026
||||||| |||||| |||||||| ||||| || ||||| | ||||||||||||||||
Sbjct 2042 GAATAGCGGCGGAGGCAGCACTAGGTTTGGAGTACTTACACAT-TGGATGCACACCACCA 2100
Query 1027 ATGATTCACAGGGATGTCAAAACTACAAACATATTGTTGGACGAGCATTATAAGGCCAAA 1086
||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2101 ATGGTTCATAGAGATGTCAAAACTACAAACATATTGCTGGACGAGCATTATAAGGCCAAA 2160
Query 1087 CTCGCTGATTTTGGGCTCTCAAGGTCTTTCCCAGTTGGAGGTGAATCTCATGTTTCGACG 1146
|| ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct 2161 CTTGCTGATTTTGGGCTCTCGAGATCTTTCCCTGTTGGAGGTGAATCTCATGTTTCGACG 2220
Query 1147 GTGATTGCTGGTACTCCTGGTTACCTTGATCC 1178
||||||||||||||||||||||||||||||||
Sbjct 2221 GTGATTGCTGGTACTCCTGGTTACCTTGATCC 2252
> AT5G59660.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr5:24035687-24039979 FORWARD LENGTH=2559
Length=2559
Score = 366 bits (198), Expect = 2e-100
Identities = 581/755 (77%), Gaps = 69/755 (9%)
Strand=Plus/Plus
Query 46 AGTAGAAAT-AGCTGGCAAGGAGATCCATGTGTCCCTCGGCAGTTTAGGTGGGACGGATT 104
||||| ||| | ||||||||| |||||||||||||||| || |||| ||||| || ||
Sbjct 958 AGTAG-AATCAACTGGCAAGGCGATCCATGTGTCCCTCAACATTTTATCTGGGATGGTTT 1016
Query 105 AAACTGCAGCAACACTGATA-CGT-C-TA-CACCAAGAATCACTTCTTTAAACTTGTCTT 160
||| |||||||| || |||| | | | | |||||||||| |||||||||||||||||||
Sbjct 1017 AAATTGCAGCAATACGGATATC-TCCACACCACCAAGAATTACTTCTTTAAACTTGTCTT 1075
Query 161 CAAGTGGTTTAGCTGGAACCATAGCAGCTGCCATTCAAAATCTCACGCAACTAGAAAAGC 220
||||||||||| |||||| |||||| |||||||||||||| || |||||||||||||| |
Sbjct 1076 CAAGTGGTTTAACTGGAAACATAGCTGCTGCCATTCAAAACCTTACGCAACTAGAAAAAC 1135
Query 221 TGGACTTGTCCAATAATAATTTGACTGGAGAGGTGCCAGAATTTCTAGGCAACATAAAAT 280
|||||||||| ||||| || |||||||||| |||||| || |||||||||||||| ||||
Sbjct 1136 TGGACTTGTCGAATAACAACTTGACTGGAGGGGTGCCGGAGTTTCTAGGCAACATGAAAT 1195
Query 281 CATTGTTGTTCATAAACTTAAGCTGGAACAATCTTAATGGTTCAATTCCTCAATCTCTTC 340
| |||| ||||| | | |||||||||||| ||||||||| |||||| ||||||
Sbjct 1196 CGTTGTCCTTCAT----T---G--GGAACAATCTTAGTGGTTCAATACCTCAAACTCTTC 1246
Query 341 AAAAGAA-AGGACTGGAATTATTTCCTCAAGGGAACCCTAGGCTTTGTCTCTCTGGTTCA 399
||||||| || ||| ||| ||||| | |||| ||||| ||||| |||||||||| ||||
Sbjct 1247 AAAAGAAGAG-ACTAGAACTATTTGTTGAAGGAAACCCAAGGCTCTGTCTCTCTGATTCA 1305
Query 400 TGCCT-A--CCATCC-AA-ACGCAAATTATTTCCA-GTGGCAATTGTCGCATCAGTTGCT 453
|| | ||| || || | | ||| ||| | | ||||||||||| ||||||||||||
Sbjct 1306 TGTAGGAAACCA-CCTAAGAAG-AAA--ATT-C-ATGTGGCAATTGTTGCATCAGTTGCT 1359
Query 454 TCGG-TGGCCAGTATTATCATTGCTGTCTTGGTTCTTATTT-TTGTTTTCAGAAAGAAAA 511
|| | || ||| | | || ||||||| ||| ||||| ||| || | ||||||||| ||
Sbjct 1360 TCTGCTG-CCA-T-TG-TCGTTGCTGTATTGATTCTT-TTTCTTATACTCAGAAAGAGAA 1414
Query 512 AGCCGTCAACTGTGGGAGCTCTACAACAGCCACCTAGTATATCGCCATCGGT-GAATGTT 570
|| | | | ||| || || ||| | |||||| || | ||| | | | | || ||||
Sbjct 1415 AGTCAACTATTGTACAAGGTCAACACCTGCCACCGAGCACATCAAC-T-G-TAGA-TGTT 1470
Query 571 ACATATCCTAATTCACCTGAAACATCAATCCAAACGAATAAGAGGAGGTTTACTTATTCA 630
|||| | ||||| | |||| | ||| || | | || || |||| |
Sbjct 1471 ACATTTGCTAATA-A---GAAA-AGCAA---AA--G-----G------TTCACATATTTA 1509
Query 631 GAGGTCACTGATA-TGACAAAAAACTTCCAAAGAGTTGTTGGGGAA-GGAGGATTCGGTA 688
||||||| | | | ||||||| |||||||||||||| || || || ||||| ||||| |
Sbjct 1510 GAGGTCA-TCAAAATGACAAACAACTTCCAAAGAGTC-TTAGGTAAAGGAGGGTTCGGCA 1567
Query 689 TTGTCTATCACGGTACTCTGAATGGAAATGCA-CAAGTAGCTGTTAAAGTACTCTCTCAA 747
| || ||||| |||||| | || || || | || || || ||||||||||||||||||
Sbjct 1568 TGGTGTATCATGGTACTGTAAAGGGTTCTG-ATCAGGTGGCCGTTAAAGTACTCTCTCAA 1626
Query 748 TCATCAACTCAAGGCTACAAGCAATTCAAGGCAGA 782
|| ||||||||||| || || |||||||| |||||
Sbjct 1627 TCGTCAACTCAAGGGTATAAACAATTCAAAGCAGA 1661
> AT5G59670.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr5:24041494-24045652 FORWARD LENGTH=2825
Length=2825
Score = 322 bits (174), Expect = 5e-87
Identities = 302/362 (83%), Gaps = 15/362 (4%)
Strand=Plus/Plus
Query 32 CCACCTATGAAATT-AGTAGAAAT-AGCTGGCAAGGAGATCCATG-TGTCCCTCGGCAGT 88
||| ||||| ||| ||||| ||| | ||||||||| |||||||| | |||||| ||||
Sbjct 1168 CCAGCTATG-GATTGAGTAG-AATCAACTGGCAAGGCGATCCATGCT-TCCCTCAGCAGC 1224
Query 89 TTAGGTGGGACGGATTAAACTGCAGCAACACTGATA-CGT--CTA-CACCAAGAATCACT 144
|||||||||||| ||| |||||| ||||| ||| | | | | ||||||||||||||
Sbjct 1225 TTAGGTGGGACGCTTTAGACTGCACCAACAGAAATATC-TCCCAACCACCAAGAATCACT 1283
Query 145 TCTTTAAACTTGTCTTCAAGTGGTTTAGCTGGAACCATAGCAGCTGCCATTCAAAATCTC 204
||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | |
Sbjct 1284 TCTTTAAACTTGTCTTCAAGTCGTTTAAATGGAACCATAGCAGCTGCCATTCAAAGTATT 1343
Query 205 ACGCAACTAGAAA-AGCTGGACTTGTCCAATAATAATTTGACTGGAGAGGTGCCAGAATT 263
|| ||||| |||| | ||||||||||| ||||||| || ||||||||||||||||| ||
Sbjct 1344 ACACAACTTGAAACA-CTGGACTTGTCGTATAATAACTTAACTGGAGAGGTGCCAGAGTT 1402
Query 264 TCTAGGCAACATAAAATCATTGTTGTTCATAAACTTAAGCTGGAACAATCTTAATGGTTC 323
||| ||||| || ||||| |||| | |||||||||||||| |||||||||||||||||||
Sbjct 1403 TCTTGGCAAAATGAAATCGTTGTCGGTCATAAACTTAAGCGGGAACAATCTTAATGGTTC 1462
Query 324 AATTCCTCAATCTCTTCAAAAGAAAGGACTGGAATTATTTCCTC-AAGGGAACCCTAGGC 382
|||||| ||| |||||| ||||||| |||| || ||| ||| |||| ||||| ||||
Sbjct 1463 AATTCCGCAAGCTCTTCGAAAGAAAAGACTAAAACTATA-CCTTGAAGGAAACCCAAGGC 1521
Query 383 TT 384
||
Sbjct 1522 TT 1523
> AT5G59616.1 | Symbols: | Interleukin-1 receptor-associated kinase
4 protein | chr5:24017511-24018077 FORWARD LENGTH=462
Length=462
Score = 200 bits (108), Expect = 2e-50
Identities = 134/146 (92%), Gaps = 3/146 (2%)
Strand=Plus/Plus
Query 7 GTGGTTCCCGTCCGAGACATCAAAACCACCTATGAAATTAGTAGAAATAGCTGGCAAGGA 66
|||||| | |||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 GTGGTTGCTGTCCAAAACATCAAAACCACCTATGAAATTAGTAGAAATAGCTGGCAAGGA 372
Query 67 GATCCATGTGTCCCTCGGCAGTTTAGGTGGGACGGATTAAACTGCAGCAACACTGATACG 126
||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| |
Sbjct 373 GATCCATGTGTCCCTCGGCAGTTTATGTGGGAGGGATTAAACTGCAGTGACACTGATATG 432
Query 127 TCTACAC--C-AAGAATCACTTCTTT 149
||||||| | |||||||||||||||
Sbjct 433 TCTACACGACCAAGAATCACTTCTTT 458
> AT2G14440.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr2:6143073-6147419 FORWARD LENGTH=2661
Length=2661
Score = 196 bits (106), Expect = 3e-49
Identities = 437/592 (74%), Gaps = 42/592 (7%)
Strand=Plus/Plus
Query 602 AAACGAATAAGAGGAGGTTTACTTATTCAGAGGTCACTGATATGACAAAAAACTTCCAAA 661
||| ||| || || || |||| ||||||||||| | || ||||| || ||||| ||
Sbjct 1694 AAATGAAAAATAGAAGATTTAAGTATTCAGAGGTTAAAGAAATGACTAATAACTT-TGAA 1752
Query 662 G-AGTTGTTGGGGAAGGAGGATTCGGTATTGTCTATCACGGTACTCTGAATGGAAATGCA 720
| ||| | || ||||||| || ||| |||| ||||| ||| ||| ||| |||| |
Sbjct 1753 GTTGTTCTCGGTAAAGGAGGCTTTGGTGTTGTTTATCATGGTTTTCTCAAT---AATGAA 1809
Query 721 CAAGTAGCTGTTAAAGTACTCTCTCAATCATCAACTCAAGGCTACAAGCAATTCAAGGCA 780
|||||||| || ||||| |||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1810 CAAGTAGCCGTCAAAGTTCTCTCTCAATCATCAACTCAAGGCTACAAGGAATTCAAAACA 1869
Query 781 GAAGTATGCTTAAAATTTGTTGATCTTCTTCTGAGAGTTCACCATACAAATTTGGTGAGC 840
||||| | || | | ||||| ||||||||||| ||||| || |||
Sbjct 1870 GAAGTC-G---AAC-T------A-CTTCTA---AGAGTTCACCACGTGAATTTAGTAAGC 1914
Query 841 CTCGTTGGATATTGTGGCGAAGGAGATCACTTGGCTCTTATCTACGAGTTTGTGCCCAAT 900
|| |||||||| |||| ||||| || |||||||||| ||||||||||| || |||
Sbjct 1915 CTTGTTGGATACTGTGATAAAGGAAATGACTTGGCTCTCATCTACGAGTTCATGGAAAAT 1974
Query 901 GGAAACTTAA-GACAACATCTGTCAGGAACACGAGGCATATCCAA--CATCAGCTGGGGT 957
|||||||||| | ||||||| || |||| ||| || | || | | | ||| |
Sbjct 1975 GGAAACTTAAAGG-AACATCTCTCGGGAAAACGTGG--TGGCCCTGTCTTGAATTGGCCT 2031
Query 958 ATTCGACT-ACGAATAGCT-TTGGAGGCTGCACTAGGA-TTGGAATATTTACAT-TCTGG 1013
| |||| | ||||||| ||| || ||||||||||| ||| | || || ||| | |||
Sbjct 2032 GGTAGACTGAA-AATAGCTATTG-AGTCTGCACTAGGAATTG-AGTACTTGCATAT-TGG 2087
Query 1014 ATGCACA-CCACCAATGATTCACAGGGATGTCAAAACTACAAACATATTGTT-GGACGA- 1070
||| | | || |||||| ||||||| ||||| |||| ||| || ||| |||| || | |
Sbjct 2088 ATGTA-AGCCGCCAATGGTTCACAGAGATGTAAAAAGTACCAATATACTGTTAGGTCTAC 2146
Query 1071 GCATTATAAGGCCAAACTCGCTGATTTTGGGCTCTCAAGGTCTTTCCCAGTTGGAGGTGA 1130
| || ||| ||||||| || ||||| || || ||||| ||||||| ||| ||| || |
Sbjct 2147 GGTTTG-AAG-CCAAACTTGCCGATTTCGGACTTTCAAGATCTTTCCTAGTGGGAAGTCA 2204
Query 1131 ATCTCATGTTTCGACGG-TGATTGCTGGTACTCCTGGTTACCTTGATCCCGA 1181
| ||||||| || || || ||||||| |||| ||| || |||||||||||
Sbjct 2205 AACTCATGTATCAACAAATG-TTGCTGGAACTCTTGGATATCTTGATCCCGA 2255
> AT2G14510.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr2:6171133-6175052 REVERSE LENGTH=2607
Length=2607
Score = 185 bits (100), Expect = 7e-46
Identities = 435/592 (73%), Gaps = 42/592 (7%)
Strand=Plus/Plus
Query 602 AAACGAATAAGAGGAGGTTTACTTATTCAGAGGTCACTGATATGACAAAAAACTTCCAAA 661
||| ||| || || || |||| ||||||||||||| || ||||| || ||||| ||
Sbjct 1640 AAATGAAAAATAGAAGATTTAAGTATTCAGAGGTCAAAGAAATGACTAACAACTT-TGAA 1698
Query 662 G-AGTTGTTGGGGAAGGAGGATTCGGTATTGTCTATCACGGTACTCTGAATGGAAATGCA 720
| ||| | || ||||||| || ||| |||| ||||| ||| ||| ||| |||| |
Sbjct 1699 GTTGTTCTCGGTAAAGGAGGCTTTGGTGTTGTTTATCATGGTTTTCTCAAT---AATGAA 1755
Query 721 CAAGTAGCTGTTAAAGTACTCTCTCAATCATCAACTCAAGGCTACAAGCAATTCAAGGCA 780
|||||||| || ||||| |||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1756 CAAGTAGCCGTCAAAGTTCTCTCTCAATCATCAACTCAAGGCTACAAGGAATTCAAAACA 1815
Query 781 GAAGTATGCTTAAAATTTGTTGATCTTCTTCTGAGAGTTCACCATACAAATTTGGTGAGC 840
||||| | || | | ||||| |||||||||||| ||||| || |||
Sbjct 1816 GAAGTC-G---AAC-T------A-CTTCTA---AGAGTTCACCATGTGAATTTAGTAAGC 1860
Query 841 CTCGTTGGATATTGTGGCGAAGGAGATC-ACTTGGCTCTTATCTACGAGTTTGTGCCCAA 899
|| || ||||| |||| |||||| || |||||||||| ||||||||||| || ||
Sbjct 1861 CTTGTCGGATACTGTGATGAAGGA-ATTGACTTGGCTCTCATCTACGAGTTCATGGAAAA 1919
Query 900 TGGAAACTTAAGACAA-CATCTGTCAGGAACACGAGGCATATCCAACATCAGCTGGG-GT 957
||||||||||| | | ||||| || |||| ||| || || | | | ||| |
Sbjct 1920 TGGAAACTTAA-AGGAGCATCTTTCGGGAAAACGTGGTGGCTCTGTCTTGAATTGGTCG- 1977
Query 958 ATTCGACT-ACGAATAGCT-TTGGAGGCTGCACTAGGA-TTGGAATATTTACAT-TCTGG 1013
| | |||| | ||||||| ||| || ||||||||||| ||| | || || ||| | |||
Sbjct 1978 AGTAGACTTAA-AATAGCTATTG-AGTCTGCACTAGGAATTG-AGTACTTGCATAT-TGG 2033
Query 1014 ATG-CACACCACCAATGATTCACAGGGATGTCAAAACTACAAACATATTGTT-GGACGA- 1070
||| || || |||||| | || || ||||| |||| ||| || ||| |||| || | |
Sbjct 2034 ATGTCAG-CCGCCAATGGTACATAGAGATGTAAAAAGTACCAATATACTGTTAGGTCTAC 2092
Query 1071 GCATTATAAGGCCAAACTCGCTGATTTTGGGCTCTCAAGGTCTTTCCCAGTTGGAGGTGA 1130
| || ||| ||||||| || ||||| || || ||||| ||||| | ||| ||| || |
Sbjct 2093 GGTTTG-AAG-CCAAACTTGCCGATTTCGGACTTTCAAGATCTTTTCTAGTGGGAAGTCA 2150
Query 1131 ATCTCATGTTTCGACGG-TGATTGCTGGTACTCCTGGTTACCTTGATCCCGA 1181
| ||||||| || || || ||||||| |||| ||| || |||||||||||
Sbjct 2151 AGCTCATGTATCAACAAATG-TTGCTGGAACTCTTGGATATCTTGATCCCGA 2201
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58182431655
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5