BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg918530 Length=1296 Score E Sequences producing significant alignments: (Bits) Value AT5G66460.1 | Symbols: MAN7, AtMAN7 | Glycosyl hydrolase superf... 2078 0.0 AT3G10890.1 | Symbols: | Glycosyl hydrolase superfamily protei... 372 5e-102 AT3G30540.1 | Symbols: | Glycosyl hydrolase superfamily protei... 93.5 5e-18 > AT5G66460.1 | Symbols: MAN7, AtMAN7 | Glycosyl hydrolase superfamily protein | chr5:26538395-26541036 REVERSE LENGTH=2011 Length=2011 Score = 2078 bits (1125), Expect = 0.0 Identities = 1240/1297 (96%), Gaps = 2/1297 (0%) Strand=Plus/Plus Query 1 ATGAAGCTTCTGTG-TTTGTTTCTATTTCTAGCGATCGTGATCCAACTAAGCTGCTGGGA 59 |||||||||||| | | |||||| |||||||||||||||||||||||| ||||| ||||| Sbjct 200 ATGAAGCTTCTG-GCTCTGTTTCCATTTCTAGCGATCGTGATCCAACTCAGCTGTTGGGA 258 Query 60 GCTAGGAGCAGATGCGTTATCGAGCAATGGGTTCGTGAGGACGAAAGGTGTTCAGTTTAG 119 ||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 259 GCTAGGAACAGATGCATTACCGAGCGGTGGGTTCGTGAGGACGAAAGGTGTTCAGTTTAG 318 Query 120 TCTCAATGGCTACCCTTATTACGCTAATGGCTTCAATGCCTACTGGCTCATGTACGTTGC 179 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct 319 TCTCAATGGCTATCCATATTACGCTAATGGCTTCAATGCCTACTGGCTCATGTACGTAGC 378 Query 180 CTCTGATCCATCCCAAAGGTCTAAGATCTCCACCGCTTTCCAAGATGCTTCTCGCCATGG 239 ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 379 CTCCGATCCATCCCAACGGTCTAAGATCTCCACCGCTTTCCAAGATGCTTCTCGCCATGG 438 Query 240 ATTAACTGTTGCTCGAACCTGGGCTTTCAGCGATGGCGGTTACAGGGCTCTTCAGTATTC 299 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 439 ATTGACCGTTGCTCGAACCTGGGCTTTCAGCGATGGCGGTTACAGGGCTCTTCAGTATTC 498 Query 300 TCCTGGATCCTACAACGAGGATATGTTTCAGGGTTTGGATTTTGCGATAGCTGAGGCAAG 359 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 499 CCCTGGCTCCTACAACGAGGATATGTTTCAGGGTTTGGATTTTGCGTTAGCTGAGGCAAG 558 Query 360 AAGGCATGGTATAAAGATAATACTCAGCTTTGCCAATAACTACGAGAGCTTCGGAGGGAG 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 559 AAGGCATGGTATAAAGATAATACTCAGCTTTGCCAATAACTACGAGAGCTTCGGAGGGAG 618 Query 420 GAAGCAATATGTGGATTGGGCTCGAAGCAGAGGCCGTCCCGTCTCTTCTGAAGACGACTT 479 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 619 GAAGCAATATGTGGATTGGGCTCGAAGCAGAGGCCGTCCCGTTTCTTCTGAAGACGACTT 678 Query 480 CTTCACAGACTCTCTTGTTAAAGATTTCTACAAGAACCATATCATGGCTGTGCTGAACAG 539 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 679 CTTCACTGACTCTCTTGTTAAAGATTTCTACAAGAACCATATCAAGGCTGTGCTGAACAG 738 Query 540 ATTCAATACCTTCACCAAAGTTCATTACAAAGATGACCCAACCATTATGGCTTGGGAGCT 599 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 739 ATTCAATACCTTTACCAAAGTTCATTACAAAGATGACCCAACCATTATGGCTTGGGAGCT 798 Query 600 CATGAACGAGCCCCGTTGCCCCTCAGATCCTTCCGGAAGAACCATTCAGGCTTGGATTAC 659 |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 799 CATGAACGAGCCCCGTTGCCCCTCTGATCCTTCCGGAAGAGCCATTCAGGCTTGGATTAC 858 Query 660 TGAAATGACTGCTCATGTGAAATCGCTAGACAGAAACCATCTGCTTGAAGCTGGCCTCGA 719 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 859 TGAAATGGCTGCTCATGTGAAATCACTAGACAGAAACCATCTGCTTGAAGCTGGCCTCGA 918 Query 720 GGGTTTCTATGGTCAGTCTTCACCTCAAAGCAAGACTCTAAACCCACCTGGCCAGTTTGG 779 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 919 AGGTTTCTATGGTCAGTCTTCACCTCAAAGCAAGACTCTTAACCCACCTGGCCAGTTTGG 978 Query 780 AACCGATTTTATCGCCAATAACCGCATCCCCAGCATTGATTTCGTTACGGTTCACTCTTA 839 ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct 979 AACCGATTTCATCGCCAATAACCGCATTCCCGGCATTGATTTCGTCACGGTTCACTCTTA 1038 Query 840 CCCTGATGAATGGTTTCCAGACTCAAGCGAGCAATCCCAAATGGATTTCTTGAACAAATG 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1039 CCCTGATGAATGGTTTCCAGACTCAAGCGAGCAATCCCAAATGGATTTCTTGAACAAATG 1098 Query 900 GCTCGACGCACATATCCAAGACGCACAGAACGTTCTTCACAAACCCATAATATTAGCAGA 959 ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1099 GCTAGACGCACACATCCAAGACGCACAGAACGTTCTTCACAAACCAATAATATTAGCAGA 1158 Query 960 GTTTGGCAAATCAATGAAGAAACCAGGTTATACCCCAGCACAGAGAGACATTGTCTTCAA 1019 |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 1159 GTTTGGTAAATCAATGAAGAAACCAGGTTATACCCCAGCGCAGAGAGACATCGTCTTCAA 1218 Query 1020 CACCGTGTACAGCAAGATTTACGGGTCTGCAAAACGAGGTGGTGCAGCAGCAGGAGGATT 1079 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1219 CACCGTGTACAGCAAGATTTACGGGTCTGCAAAACGAGGAGGTGCAGCAGCAGGAGGATT 1278 Query 1080 GTTCTGGCAACTTCTGGTAAATGGAATTGATAATTTTCAAGATGGCTATGGGATCATACT 1139 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 1279 GTTCTGGCAACTTCTGGTAAACGGAATTGATAATTTTCAAGATGGGTATGGGATCATACT 1338 Query 1140 TAGCCAAAGCTCGTCCACGGTTAACGTCATTTCACAGCAATCGCGGAAGTTGACTTTGAT 1199 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1339 TAGCCAAAGCTCGTCGACCGTTAACGTCATTTCACAGCAATCGCGGAAGTTGACTTTGAT 1398 Query 1200 TCGGAAAATCTTTGCGAGGATGATCAATGTGGAGAAATGGAAGAGAGCAAGAGGCCGGGG 1259 | |||||||||| || |||||||||||||||||||||||||||||||| ||||| | ||| Sbjct 1399 TAGGAAAATCTTCGCTAGGATGATCAATGTGGAGAAATGGAAGAGAGCGAGAGGTCAGGG 1458 Query 1260 ACAAGTAAGAAAACGAGGTCACAACATCAAAAACTGA 1296 |||||| | |||||||||||||| ||||| |||||| Sbjct 1459 ACAAGTTGGGAAACGAGGTCACAAAATCAATAACTGA 1495 > AT3G10890.1 | Symbols: | Glycosyl hydrolase superfamily protein | chr3:3407455-3409000 REVERSE LENGTH=1245 Length=1245 Score = 372 bits (201), Expect = 5e-102 Identities = 782/1053 (74%), Gaps = 77/1053 (7%) Strand=Plus/Plus Query 79 TCGAGCAATGGGTTCGTGAGGACG-AAAGGTGTTCAGTTTAGTCTCAAT-GGCTACCCTT 136 ||||| |||| |||||||| | | ||||| || ||||||| ||||||| || ||| || Sbjct 79 TCGAGTGATGGCTTCGTGAGTA-GAAAAGGCGTCCAGTTTATTCTCAATGGGAAACCATT 137 Query 137 ATTACGCTAATGGCTTCAATGCCTACTGGCTCATGTACGTTGCCTCTGATCC-ATCC-CA 194 ||||||||||||||||||||||||||||||| ||||| ||| | ||| | | || || Sbjct 138 -TTACGCTAATGGCTTCAATGCCTACTGGCTCGCGTACGAAGCCACCGATTCGA-CCACA 195 Query 195 AAGGTCTAAGATCTCC-ACC-GCTTTCCAAGATGCTTCTCGC-CATGGATTA-ACTGTTG 250 | ||| ||||||| | | | |||| || |||| | | || | ||| || | | Sbjct 196 A-GGTTTAAGATCACTTATGTG-TTTCAAA-ATGCAAC-CATTCACG-ATTTGACCATCG 250 Query 251 CTC-GAACCTGGGCTTTCAGCGATGGCGGTTACAGGGCTCTTCAGTATT-CTCCTGGA-T 307 || | || |||| ||| |||||||||| ||| | ||||| || ||| | ||||| | Sbjct 251 -TCCGCACTTGGGGGTTCCGCGATGGCGGCTACCGCGCTCTCCAA-ATTGCCCCTGGTGT 308 Query 308 CCTACAACGAGGATA-TGTTTCAGGGTTTGGATTTTGCGATAGCTGAGGCAAGAAGGCAT 366 | ||| | || | | | |||||||||||||||||||||||||| || |||| ||| | | Sbjct 309 C-TACGATGAAAAAACT-TTTCAGGGTTTGGATTTTGCGATAGCGGAAGCAAAAAGAC-T 365 Query 367 -GGTATAAAGATAATACTCAGCTTTGCCAATAACTA--CGAGAGCTTCGGAGGGAGGAAG 423 |||||||| || ||| ||| ||||| ||||||||| | || ||| ||||||||||| Sbjct 366 CGGTATAAAAATGATAATCACCTTTGTCAATAACTATTCT-GA-CTTTGGAGGGAGGAAA 423 Query 424 CAATATGTGGATTGGGCTCGAAGCAGAGGCCGTCCCGTCTCTTCTGAAGACGACTTCTTC 483 ||||| || ||||||||| || || ||||| ||| ||||| || ||||| |||| | Sbjct 424 CAATACGTTGATTGGGCTAAAAACACAGGCCAAAACGTATCTTCAGATGACGATTTCTAC 483 Query 484 ACAGACTCTCTTGTTAAAGATTTCTACAAGAACCATATCATGGCTGTGCTGAACAGATTC 543 ||| || ||||||||||| | | |||||||||||| ||| | || || |||||||| | Sbjct 484 ACAAACCCTCTTGTTAAACAGTACTACAAGAACCACGTCAAGACTATGGTGAACAGAGTG 543 Query 544 AATACCTTCACCAAAGTTCATTACAAAGATGACCCAACCATTATGGCTTGGGAGCTCATG 603 ||||| || ||||||||| | ||||||||||| ||||||||||||| ||||||||| ||| Sbjct 544 AATACATTTACCAAAGTTGAGTACAAAGATGAACCAACCATTATGGGTTGGGAGCTTATG 603 Query 604 AACGAGCCCCGTTGCCCCTCAGATCCTTCCGGAAGAACCATT-CAGGCTTGGATTACTGA 662 ||||| || | ||| ||||||| |||| |||| || | ||||||||| | ||| Sbjct 604 AACGAACCACAATGCAGAGCAGATCCAAGTGGAAAAACCCTTAC-GGCTTGGATGAATGA 662 Query 663 AATGACTGCTC-ATGTGAAATC-GCTAGACAGAAACCATCTGCT-TGAAGCTGGCCTCGA 719 |||| || || |||||||||| | | ||| ||| ||||| || | | |||| || || Sbjct 663 AATGGCT-CTTTATGTGAAATCTGTT-GACTCAAAGCATCTCCTCTCTA-CTGGTCTTGA 719 Query 720 GGGTTTCTATGGTCAGTCTTCACCTCAAAGCAAGAC-TCT--AAACCCACCTG--GCCA- 773 || ||||||||| | || || |||||||| ||||| ||| ||| || || |||| Sbjct 720 AGGCTTCTATGGTGACTCATCTCCTCAAAGAAAGACATCTCTAAATCCGGTTGCAGCCAA 779 Query 774 -GTT-T-GGAACCGATTTTATCGCCAATAACCGCATCCCCA-GC-ATTGATTTCGT-TAC 827 ||| | ||||| ||||| ||||| ||| || | | | | || |||||||||| | | Sbjct 780 CGTTCTTGGAACTGATTTCATCGCTAATCACAA-A-CTCGATGCCATTGATTTCGCAT-C 836 Query 828 GGTTCACTCTTACCCTGA-TGAATGGTTTCCAGACTCA-AGCGAGCAATCCCAAATGGAT 885 | ||||||||||||| || | | ||||||||| ||| | ||| |||| | | | | Sbjct 837 GATTCACTCTTACCCCGACTTA-TGGTTTCCAAACTTGGAT-GAGAAATCTCGATTAAAC 894 Query 886 TTCTTGAACAAA-TGGCTCGAC-G-CACATATCCAAGACGCACAGAACGTTCTTCACAAA 942 || || || ||| |||||||| | ||| | | |||| ||||| ||| ||||| | ||| Sbjct 895 TTGTT-AAGAAAATGGCTCGAATGTCACCT-TG-AAGATGCACAAAACATTCTTAAAAAA 951 Query 943 CC-CATAATATTAGCAGAGTTTGGCAAATCAATGAAGAAACCAGGTTATACCCCAG-CAC 1000 || | |||| ||| ||| || || ||| ||| ||| | |||||| || || | || | | Sbjct 952 CCTC-TAATCCTAGGAGAATTCGGGAAACCAACGAACACACCAGGCTACACTC-AGGCTC 1009 Query 1001 AGAGAGACATTGTCTTCAACAC--CGTGT-ACAGCAAGATTTACGGGTCTGC--AAAACG 1055 |||||||| || |||||| | ||| | ||| || |||||| |||||| |||| Sbjct 1010 AGAGAGACGCAGTGTTCAACGCAACGTTTGACACCA---TTTACGAGTCTGCTGAAAA-- 1064 Query 1056 AGGTGGTGCAGCAGCAGGAGGATTGTTCTGGCA 1088 ||| ||| |||| ||||||| |||||| ||||| Sbjct 1065 AGGCGGTCCAGCTGCAGGAGCATTGTTTTGGCA 1097 > AT3G30540.1 | Symbols: | Glycosyl hydrolase superfamily protein | chr3:12144792-12146502 REVERSE LENGTH=1017 Length=1017 Score = 93.5 bits (50), Expect = 5e-18 Identities = 101/125 (81%), Gaps = 6/125 (5%) Strand=Plus/Plus Query 86 ATGGGTTCGTGAGGACGAAAGGTGTTCAGTTTAGTCTCAAT-GGCTACCCTTATTACGCT 144 ||||||||||||| | ||| || || || |||| ||||||| || ||| || ||||||| Sbjct 107 ATGGGTTCGTGAGCAGGAATGGCGTCCAATTTATTCTCAATGGGAAACCATT-TTACGCT 165 Query 145 AATGGCTTCAATGCCTACTGGCTCATGTACGTTGCCT-CTGATCCATCC-CAAAGGTCTA 202 |||||||||||||||||||||||| ||||| || | | |||||| || ||| | | || Sbjct 166 AATGGCTTCAATGCCTACTGGCTCGCGTACGAAGC-TACCGATCCAGCCACAA-GATTTA 223 Query 203 AGATC 207 ||||| Sbjct 224 AGATC 228 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63754692150 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5