BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg918672 Length=435 Score E Sequences producing significant alignments: (Bits) Value AT3G02280.1 | Symbols: | Flavodoxin family protein | chr3:4534... 682 0.0 > AT3G02280.1 | Symbols: | Flavodoxin family protein | chr3:453421-457841 FORWARD LENGTH=2201 Length=2201 Score = 682 bits (369), Expect = 0.0 Identities = 407/425 (96%), Gaps = 3/425 (1%) Strand=Plus/Plus Query 1 ATGGGAGAAAAGCCGAGGAAGCTGCTTGTGATGTATGCTTCTCAGACCGGGAACGCTCTT 60 ||||||||||| | ||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct 148 ATGGGAGAAAAACAAAGGAAGCTGCTTGTGTTGTATGCCTCTCAGACCGGAAACGCTCTT 207 Query 61 GATGCGGCGGAGCGTATTGGCCGCGAAGCAGAACGCCGTGGATTTCCAGCATCTATCGTC 120 |||||||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||| Sbjct 208 GATGCGGCGGAGCGTATTGGCCGCGAAGCAGAACGCCGTGGACTGCCAGCTTCTGTCGTC 267 Query 121 TCCACCGACGAATTCGACGCGAGTTCCTTA-C-C-TCATGAGGAGGCTGTTGTTTTTGTT 177 |||||||||||||||||| ||||||||||| | | ||||||||||||||||||||||||| Sbjct 268 TCCACCGACGAATTCGACACGAGTTCCTTACCTCATCATGAGGAGGCTGTTGTTTTTGTT 327 Query 178 GTCTCCACTACAGGGCAAGGAGACTCTCCTGATTCCTTTAAGGCATTTTGGAGGTTTCTT 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 328 GTCTCCACTACAGGGCAAGGAGACTCTCCTGATTCCTTTAAGGCATTTTGGAGGTTTCTT 387 Query 238 CTTCAAAGAAATCTGGGAAACTATTGGTTGCAACAAGTTCGCTATGCGGTGTTTGGATTA 297 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 388 CTTCAAAGAAATCTGGGAAACTATTGGTTGCAACAAGTTCGCTATGCAGTGTTTGGACTA 447 Query 298 GGTGATTCTGGTTACCAGAAGTACAATTTTGTAGCAAAGAAGCTAGACAAAAGATTATCA 357 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 448 GGTGATTCTGGTTACCAGAAGTACAACTTTGTAGCAAAGAAGCTAGACAAAAGATTATCA 507 Query 358 GATCTGGGGGCCACAACCATCATTGAAAAAGGTCTAGGAGATGATCAACACCCATCAGGG 417 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 508 GATCTTGGGGCCACAACCATCATTGAAAAAGGTCTAGGAGATGATCAACACCCATCAGGG 567 Query 418 TATGA 422 ||||| Sbjct 568 TATGA 572 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20660044839 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5