BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg918777 Length=658 Score E Sequences producing significant alignments: (Bits) Value AT1G01780.1 | Symbols: PLIM2b | GATA type zinc finger transcrip... 1072 0.0 > AT1G01780.1 | Symbols: PLIM2b | GATA type zinc finger transcription factor family protein | chr1:282761-284245 FORWARD LENGTH=939 Length=939 Score = 1072 bits (580), Expect = 0.0 Identities = 632/658 (96%), Gaps = 0/658 (0%) Strand=Plus/Plus Query 1 AAAAAGACCCAACaaaaaaaaTGTCTTTCACAGGAACTCTCGACAAATGCAACGTTTGTG 60 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 139 AAAAAGATAAAACAAAAAAAATGTCTTTCACAGGAACTCTCGACAAATGCAATGTTTGTG 198 Query 61 ATAAGACAGTCTATGTGGTGGACATGTTGTCCATTGAAGGAATGCCTTACCACAAGTCTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 ATAAGACAGTCTATGTGGTGGACATGTTGTCCATTGAAGGAATGCCTTACCACAAGTCTT 258 Query 121 GCTTCAGGTGCACCCATTGCAAAGGAACCCTTGTGATGAGCAACTATTCCTCCATGGACG 180 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 259 GCTTCAGGTGTACCCATTGCAAAGGAACCCTTCAGATGAGCAACTATTCCTCCATGGACG 318 Query 181 GAGTTTTGTACTGCAAGACGCATTTTGAGCAGCTCTTCAAGGAATCTGGCAATTTCAGCA 240 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 319 GAGTTTTGTACTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGCAATTTCAGCA 378 Query 241 AAAACTTTCAACCAGGAAAAACTGAGAAGCCGGAGCTGACTAAGACTCCCAGCAAGATAT 300 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 379 AAAACTTTCAACCAGGAAAAACTGAGAAGCCAGAGCTGACTAGGACTCCCAGCAAGATAT 438 Query 301 CTTCCATCTTCTGTGGAACACAAGACAAGTGTGCCGCTTGCGAAAAAACTGTTTACCCTC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 439 CTTCCATCTTCTGTGGAACACAAGACAAGTGTGCCGCTTGCGAAAAAACTGTTTACCCTC 498 Query 361 TTGAAAAGATACAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCCGATGCGCTCACG 420 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 499 TTGAAAAGATACAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCCGGTGCGCTCACG 558 Query 421 GTGGGTGTACGCTCACTCACTCCTCCTACGCCTCCCTGGATAGCGTTCTCTATTGCCGGC 480 ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||| | Sbjct 559 GTGGGTGTACGCTGACTCACTCCTCCTACGCCTCCTTAGATAGCGTTCTCTATTGCCGAC 618 Query 481 ATCACTTCAACCAACTGTTCCTGGAGAAAGGAAACTACGCTCACGTCCTCCAAGCTGCCA 540 ||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||| Sbjct 619 ATCACTTTAACCAACTCTTCATGGAGAAAGGAAACTACGCTCACGTCCTCCAAGCCGCCA 678 Query 541 ACCACCGTCGCACAGCCTCAGGCAACACACTTCCACCGGAACCTACCGAAGACATCGCCG 600 | |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 679 ATCACCGTCGCACAGCCTCAGGCAACACTCTTCCACCGGAACCTACCGAAGACGTCGCCG 738 Query 601 TCGAGGCCAAGGAAGAGAATGGCGTTTCACAGTCTTGAATATCTCTTACCTGAGTGTT 658 | ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct 739 TGGAGGCCAAGGAAGAGAATGGCGTTTCAGAGTCTTGAATATCTCTTACATGAGTGTT 796 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31798215051 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5