BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg918798
Length=1549
Score E
Sequences producing significant alignments: (Bits) Value
AT1G01610.1 | Symbols: ATGPAT4, GPAT4 | glycerol-3-phosphate ac... 2573 0.0
AT4G00400.1 | Symbols: GPAT8, AtGPAT8 | glycerol-3-phosphate ac... 1386 0.0
> AT1G01610.1 | Symbols: ATGPAT4, GPAT4 | glycerol-3-phosphate
acyltransferase 4 | chr1:221691-224340 REVERSE LENGTH=1856
Length=1856
Score = 2573 bits (1393), Expect = 0.0
Identities = 1493/1542 (97%), Gaps = 4/1542 (0%)
Strand=Plus/Plus
Query 4 ATTCGCCGCAAGAAAACATGTCTCCGGCGAAGAAGAGCCGAAGTTTTCCTCCGATAAGCG 63
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 70 ATTCGCCGCAAG-AAAGATGTCTCCGGCGAAGAAGAGCCGAAGTTTTCCTCCGATAAGCG 128
Query 64 AGTGTAAAAGCAGAGAGTATGATTCGATCGCTGCGGATCTCGACGGGACTCTGCTTCTCT 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 129 AGTGTAAAAGCAGAGAGTATGATTCGATCGCTGCGGATCTCGACGGGACTCTGCTTCTGT 188
Query 124 CAAGAAGCTCTTTCCCTTACTTCATGCTCGTCGCCATTGAAGCAGGTAGTCTCTTCCGTG 183
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 189 CAAGAAGCTCTTTCCCTTACTTCATGCTGGTGGCCATTGAAGCAGGTAGTCTCTTCCGTG 248
Query 184 GATTGATCCTTCTTCTTTCTCTTCCCATCGTCATCATCGCTTATCTCTTCGTCTCCGAAT 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249 GATTGATCCTTCTTCTTTCTCTTCCCATCGTCATCATCGCTTATCTCTTCGTCTCCGAAT 308
Query 244 CTCTCGGAATCCAAATCCTTATCTACATCTCCTTCGCCGGCATCAAAATCAAGAACATCG 303
|||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||
Sbjct 309 CTCTCGGAATCCAAATCCTTATCTTCATCTCCTTCGCCGGTATCAAGATCAAGAACATCG 368
Query 304 AACTCGTCTCTCGCGCCGTTCTTCCACGGTTTTACGCGGCGGATGTGAGGAAAGATAGTT 363
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 369 AACTCGTCTCTCGCGCCGTTCTTACACGGTTTTACGCGGCGGATGTGAGGAAAGATAGTT 428
Query 364 TTGAGGTGTTTGATAAATGCAAGA-G-G-AAAGTGGTGGTTACTGCGAATCCGATAGTGA 420
||||||||||||||||||| |||| | | ||||| ||||| |||||||||||||||||||
Sbjct 429 TTGAGGTGTTTGATAAATGTAAGAAGAGGAAAGTAGTGGTGACTGCGAATCCGATAGTGA 488
Query 421 TGGTGGAGCCATTCGTCAAGGACTATTTGGGAGGAGATAAAGTTTTGGGAACAGAGATTG 480
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 489 TGGTTGAGCCATTCGTCAAAGACTATTTGGGAGGAGATAAAGTTTTGGGAACAGAGATTG 548
Query 481 AAGTTAACCCCAAAACCATGAAAGCCACTGGGTTTGTTAAAAAGCCTGGTGTTCTTGTTG 540
|||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct 549 AAGTTAACCCCAAAACGATGAAAGCTACTGGTTTTGTGAAAAAGCCTGGTGTTCTTGTTG 608
Query 541 GTGATTTGAAGAGATTAGCAATCTTGAAAGAGTTCGGCGAAGAATCACCGGATCTTGGAC 600
||||| | ||||||||||| |||||||||||||||||||| || |||||||||||||| |
Sbjct 609 GTGATCTCAAGAGATTAGCCATCTTGAAAGAGTTCGGCGATGACTCACCGGATCTTGGCC 668
Query 601 TCGGTGACCGGACCTCCGATCACGATTTCATGTCCATTTGCAAGGAAGGTTACATGGTGC 660
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 TCGGTGACCGCACCTCCGATCACGATTTCATGTCCATTTGCAAGGAAGGTTACATGGTGC 728
Query 661 ATGAGACCAAATCAGCCACAACAGTCCCTATAGAGCGTCTCAAGAACCGCATAATCTTCC 720
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 729 ATGAGACCAAATCAGCCACAACAGTCCCTATAGAGAGTCTCAAGAACCGCATAATCTTCC 788
Query 721 ACGATGGCCGTCTTGTCCAACGTCCGACGCCATTAAACGCCTTAATCATTTACCTTTGGC 780
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 789 ATGATGGCCGTCTTGTCCAACGTCCGACCCCATTAAACGCCTTAATCATTTACCTTTGGC 848
Query 781 TTCCTTTCGGCTTCATGCTCTCTATCTTCCGCGTCTACTTCAACCTCCCTTTACCCGAAC 840
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 849 TTCCTTTCGGCTTCATGCTCTCTGTCTTCCGCGTCTACTTCAACCTCCCTTTACCCGAAC 908
Query 841 GCTTCGTTCGCTACACTTACGAGATCCTCGGCATTCACCTCACAATCCGTGGCCACCGTC 900
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 GCTTCGTCCGCTACACTTACGAGATCCTCGGCATTCACCTCACAATCCGTGGCCACCGTC 968
Query 901 CTCCCCCTCCTTCCCCCGGCAAACCTGGAAACCTCTACGTCCTTAACCACCGCACCGCCC 960
|||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct 969 CTCCACCTCCTTCCCCCGGAAAACCTGGAAACCTCTACGTTCTCAACCACCGCACCGCCC 1028
Query 961 TTGACCCCATTATCATCGCCATTGCTCTCGGCCGTAAGATCACATGTGTCACTTATAGTG 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 TTGACCCCATTATCATCGCCATTGCTCTCGGCCGTAAGATCACATGTGTCACTTATAGTG 1088
Query 1021 TCTCTCGCCTCTCCCTGATGCTCTCACCCATCCCTGCTGTTGCTCTGACCCGAGACCGTG 1080
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1089 TCTCTCGCCTCTCCCTGATGCTCTCACCCATTCCTGCTGTTGCTCTGACCCGAGACCGTG 1148
Query 1081 TCGCTGATGCAGCCCGCATGAGACAACTCCTCGAGAAAGGTGATTTGGTGATCTGTCCTG 1140
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1149 TCGCTGACGCAGCCCGCATGAGGCAACTCCTCGAGAAAGGTGATTTGGTGATCTGTCCTG 1208
Query 1141 AAGGCACAACGTGTAGAGAACCATATCTACTAAGATTCAGTGCTCTATTTGCGGAGCTGA 1200
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1209 AAGGCACAACGTGTAGAGAACCATATCTACTAAGGTTCAGTGCTCTATTTGCAGAGCTGA 1268
Query 1201 GCGACCGGATCGTGCCTGTGGCCATGAACTGCAAGCAAGGGATGTTCAACGGGACGACAG 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 GCGACCGGATCGTGCCTGTGGCCATGAACTGCAAGCAAGGGATGTTCAACGGGACGACAG 1328
Query 1261 TAAGAGGTGTGAAATTCTGGGATCCGTACTTCTTCTTCATGAACCCTCGACCTAGCTACG 1320
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1329 TTAGAGGTGTGAAATTCTGGGATCCGTACTTCTTCTTCATGAACCCCCGACCTAGCTACG 1388
Query 1321 AGGCCACTTTCTTGGACCGTTTGCCCGAAGAAATGACGGTAAACGGTGGTGGCAAGACTC 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 AGGCCACTTTCTTGGACCGTTTGCCCGAAGAAATGACGGTAAACGGTGGTGGCAAGACTC 1448
Query 1381 CTTTTGAGGTGGCTAATTACGTTCAGAAGGTGATCAGTGGAGTTTTGGGGTTCGAATGCA 1440
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 1449 CTTTTGAGGTGGCTAATTACGTTCAGAAGGTGATCGGTGGAGTTTTGGGGTTCGAATGTA 1508
Query 1441 CTGAACTCACAAGGAAGGATAAGTATCTGTTGCTTGGAGGCAACGATGGAAAGGTTGAGT 1500
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1509 CTGAACTTACAAGGAAGGATAAGTATCTGTTGCTTGGAGGCAACGACGGAAAGGTTGAGT 1568
Query 1501 CTATCAATAAGACCAAGTCCACGGAGTAATAATCCAGCTAGT 1542
||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1569 CTATCAATAAGACCAAGTCCATGGAGTAATAATCCAGCTAGT 1610
> AT4G00400.1 | Symbols: GPAT8, AtGPAT8 | glycerol-3-phosphate
acyltransferase 8 | chr4:174062-176853 REVERSE LENGTH=1872
Length=1872
Score = 1386 bits (750), Expect = 0.0
Identities = 1272/1522 (84%), Gaps = 43/1522 (3%)
Strand=Plus/Plus
Query 17 AAACATGTCTCCGGCGAAGAAGAGCCGAAGTTTTCCTCCGATAAGC-GAGTGTAAAAG-C 74
||| |||||||||| ||||||||| | || || ||||| |||| | || || | || |
Sbjct 117 AAA-ATGTCTCCGGAGAAGAAGAGTCAAAACTTCCCTCCAATAA-CGGAATG-CAGAGAC 173
Query 75 AGAGAGTATGATTCGATCGCTGCGGATCTCGACGGGACTCTGCTTCTCTCAAGAAGCTCT 134
||||||| |||||||| || || ||||| |||||||||||||||||||||||||||||
Sbjct 174 GGAGAGTACGATTCGATAGCCGCCGATCTTGACGGGACTCTGCTTCTCTCAAGAAGCTCC 233
Query 135 TTCCCTTACTTCATGCTCGTCGCCATTGAAGCAGGTAGTCTCTTCCGTGGATTGATCCTT 194
||||||||||||||||||||||| ||||||| || || || || |||||| | |||||
Sbjct 234 TTCCCTTACTTCATGCTCGTCGCTGTTGAAGCTGGAAGCCTTTTACGTGGACTAATCCTC 293
Query 195 CTTCTTTCTC-TTCCCA-TCGTCATCATCGCTTATCTCTTCGTCTCCGAATCTCTCGGAA 252
|||| |||| || ||| ||||||| ||| |||| || ||||| ||||||||||| || |
Sbjct 294 CTTC--TCTCGTTACCATTCGTCATTATCTCTTACCTATTCGTATCCGAATCTCTTGGTA 351
Query 253 TCCAAATCCTTATCTACATCTCCTTCGCCGG-CATCAAAAT-CAAGAACATCGAACTCGT 310
|||| ||||| |||| |||||| ||||| || | ||||||| | | | |||||||| ||
Sbjct 352 TCCAGATCCTCATCTTCATCTCATTCGCTGGTC-TCAAAATCCGCG-ATATCGAACTTGT 409
Query 311 CTCTCGCGCCGTTCTTCCACGGTTTTACGCGGCGGATGTGAGGAAAGATAGTTTTGAGGT 370
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 410 CTCTCGCGCAGTTCTTCCACGGTTTTACGCGGCGGATGTGAGGAAAGACAGTTTTGAGGT 469
Query 371 GTTTGATAAATGCAAGAGGAAAGTGGTGGTTACTGCGAATCCGATAGTGATGGTGGAGCC 430
||||||||| || ||||| |||||||| || || ||||||||||| |||||||||||| |
Sbjct 470 GTTTGATAAGTGTAAGAGAAAAGTGGTAGTGACGGCGAATCCGATTGTGATGGTGGAGGC 529
Query 431 ATTCGTCAAGGACTAT-TTGGGAGGAGATAAAGTTTTGGGAACAGAGATTGAAGTTAACC 489
|| || ||||| ||| |||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 530 GTTTGTGAAGGATTATCTTGG-AGGTGATAAAGTTTTGGGAACAGAGATTGAAGTTAACC 588
Query 490 CCAAAACCA-TGAAAGCCACTGGGTTTGTTAAAAAGCCTGGTGTTCTTGTTGGTGAT-TT 547
| ||||||| | | ||||||||| ||||| || |||||||||||||||||||||||| ||
Sbjct 589 CTAAAACCAAT-AGAGCCACTGGATTTGTGAAGAAGCCTGGTGTTCTTGTTGGTGATCTT 647
Query 548 GAAGAGATTAGCAATCTTGAAAGAGTTCGGCGAA-GAATCACCGGATCTTGGACTCGGTG 606
||||| ||||| || || |||||||| || || |||||||| ||||| || |||||||
Sbjct 648 -AAGAGGTTAGCCATTTTAAAAGAGTTTGGT-AACGAATCACCTGATCTCGGCCTCGGTG 705
Query 607 ACCGGACCTCCGATCACGATTTCATGTC-CATTTGCAAGGAAGGTTACATGGTGCATGAG 665
| || ||||| ||||| ||||||||||| | | |||||| ||||||||||||| |||| |
Sbjct 706 ATCGAACCTCTGATCATGATTTCATGTCTC-TCTGCAAGAAAGGTTACATGGTTCATGCG 764
Query 666 ACCAAATCAGCCACAAC-AGTCCCTATAGAGCGTCTCAA-GAACCGCATAATCTTCCACG 723
||||| ||||||||||| | ||| | ||| || || || |||||||||| ||||||| |
Sbjct 765 ACCAAGTCAGCCACAACGATTCCAAA-AGAACG-CTTAAAGAACCGCATAGTCTTCCATG 822
Query 724 ATGGCCGTCTT-GTC-CAACGTCCGACGCCATTAAACGCC-TTAATCATTTACCTTTGGC 780
|||| ||| || | | |||||||| || || ||||||||| ||| ||| ||||| ||||
Sbjct 823 ATGGGCGT-TTAG-CGCAACGTCCAACTCCGTTAAACGCCATTA-TCACATACCTATGGC 879
Query 781 TTCCTTTCGGCTTCATGCTCTCTATC-TTCCGCGTCTACTTCAACCTCCCTTTACCCGAA 839
||||||| || ||||| ||||| ||| ||| ||||||||||||||||||||||||| |||
Sbjct 880 TTCCTTTTGGTTTCATCCTCTCCATCATTC-GCGTCTACTTCAACCTCCCTTTACCTGAA 938
Query 840 CGCTTCGTTCGCTACACTTACGAGATCCTCGGCATTCACCTCACAATCCGTGGCCACCGT 899
| || || || |||||||||||||| ||||| || ||| | || || ||||| || |||
Sbjct 939 AGATTTGTCCGTTACACTTACGAGATGCTCGGGATCCACTTAACCATTCGTGGTCATCGT 998
Query 900 CCTCCCCCTCCTTCCCCCGGCAAAC-CT-GGAAACCTCTACGTCCTTAACCACCGCACCG 957
||||| ||||||||||| || || | || || |||||||| |||||||||||||| ||||
Sbjct 999 CCTCCACCTCCTTCCCCTGG-AA-CTCTTGGCAACCTCTATGTCCTTAACCACCGTACCG 1056
Query 958 CCCTTGACCCCATTATCATCGCCATTGCTCTCGGCCGTAAGATCACATGTGTCACTTATA 1017
| ||||| ||||| ||| | || |||||||| || ||||||||| || |||||||| |
Sbjct 1057 CGCTTGATCCCATCATCGTTGCTATTGCTCTTGGACGTAAGATCTGTTGCGTCACTTACA 1116
Query 1018 GTGTCTCTCGCCTCTCCCTGATGCTCTCACCCATCCCTGCTGTTGCTCTGACCCGAGACC 1077
|||||||||| |||||||| ||||| || || || ||||||||||| || ||||| ||||
Sbjct 1117 GTGTCTCTCGTCTCTCCCTTATGCTTTCTCCTATTCCTGCTGTTGCCCTCACCCGTGACC 1176
Query 1078 GTGTCGCTGATGCAGCCCGCATGAGACAACTCCTCGAGAAAGGTGATTTGGTGATCTGTC 1137
||| | | ||||| ||| ||||||| |||| ||||||||||| || |||||||| ||||
Sbjct 1177 GTGCCACCGATGCTGCCAACATGAGAAAACTTCTCGAGAAAGGCGACTTGGTGATATGTC 1236
Query 1138 CTGAAGGCACAACGTGTAGAGAACCA-TATCTACTAAGATTCAGTGCTCTATTTGCGGAG 1196
| |||||||| |||||||||||| | |||||||| ||||| || |||||||| || |||
Sbjct 1237 CGGAAGGCACGACGTGTAGAGAAG-AGTATCTACTGAGATTTAGCGCTCTATTCGCAGAG 1295
Query 1197 CTGAGCGACCGGATCGTGCCTGTGGCCATGAACTGCAAGCAAGGGATGTTCAACGGGACG 1256
|| ||||||||||| ||||| || || |||||||| || ||||| ||||||||||||||
Sbjct 1296 CTAAGCGACCGGATTGTGCCAGTAGCGATGAACTGTAAACAAGGAATGTTCAACGGGACC 1355
Query 1257 ACAGTAAGAGGTGTGAAATTCTGGGATCCGTACTTCTTCTTCATGAACCCTCGACCTAGC 1316
||||| || |||||||| || ||||| || |||||||||||||||||||| |||| |||
Sbjct 1356 ACAGTTAGGGGTGTGAAGTTTTGGGACCCTTACTTCTTCTTCATGAACCCAAGACCAAGC 1415
Query 1317 TACGAGGCCACTTTCTTGGACCGTTTGCCCGAAGAAATGACGGTAAACGGTGGTGGCAAG 1376
|| || |||||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct 1416 TATGAAGCCACTTTCTTGGATCGTTTGCCTGAAGAAATGACTGTCAACGGTGGTGGCAAG 1475
Query 1377 ACTCCTTTTGAGGTGGCTAATTACGTTCAGAAGGTGATCAGTG-GAGTTTTGGGGTTCGA 1435
|||||| | ||||||||||||||||| ||||| || ||| | | | |||||||| |||||
Sbjct 1476 ACTCCTATAGAGGTGGCTAATTACGTCCAGAAAGTTATCGGCGCG-GTTTTGGGCTTCGA 1534
Query 1436 ATGCACTGAACTCACAAGGAAGGATAAGTATCTGTTGCTTGGAGGCAACGATGGAAAGGT 1495
|||||| ||||| || | |||||||| ||||| ||||||||||| || || || |||||
Sbjct 1535 ATGCACCGAACTTACTCGCAAGGATAAATATCTTTTGCTTGGAGGTAATGACGGCAAGGT 1594
Query 1496 TGAGTCTATCAATAAGACCAAG 1517
||||||||||| || ||||||
Sbjct 1595 GGAGTCTATCAACAACACCAAG 1616
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76455430035
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5