BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg918881 Length=1125 Score E Sequences producing significant alignments: (Bits) Value AT1G02305.1 | Symbols: | Cysteine proteinases superfamily prot... 1858 0.0 AT1G02300.1 | Symbols: | Cysteine proteinases superfamily prot... 935 0.0 > AT1G02305.1 | Symbols: | Cysteine proteinases superfamily protein | chr1:455688-458164 FORWARD LENGTH=1407 Length=1407 Score = 1858 bits (1006), Expect = 0.0 Identities = 1087/1126 (97%), Gaps = 6/1126 (1%) Strand=Plus/Plus Query 5 CAGAAGAGAAAGATTCATGGCTGATAATTGTATCA-A--ACTTCACTTAGCCTCTGTTTT 61 |||||||||||||| |||||||||||||||||||| | ||||||| |||||||||||| Sbjct 113 CAGAAGAGAAAGATCCATGGCTGATAATTGTATCAGACTTCTTCACTCAGCCTCTGTTTT 172 Query 62 CTTCTTTTTAGGGCTTCTAATTTCATCCTTCAAC---TTGCAGGGTATTGCAGCAGAAAA 118 ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 173 CTTCTGTTTAGGGCTTCTAATTTCATCCTTCAACTTGTTGCAGGGTATTGCAGCTGAAAA 232 Query 119 TCTTTCCAAGCAGAAACTGACCTCATGGATTCTTCAGAATGAGATTGTCAAGGAAGTCAA 178 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 233 TCTTTCCAAGCAGAAACTGACCTCATGGATTCTTCAGAATGAGATTGTAAAGGAAGTCAA 292 Query 179 TGAGAATCCAAACGCTGGATGGAAAGCTGCTTTCAATGATCGGTTTGCAAACGTCACTGT 238 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 293 TGAGAATCCAAACGCTGGATGGAAAGCTTCTTTCAATGATCGGTTTGCAAACGCCACTGT 352 Query 239 TGCAGAGTTTAAGCGCCTTCTTGGTGTTAAACCAACACCAAAGACGGAATTTTTGGGTGT 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 353 TGCAGAGTTTAAGCGCCTTCTTGGTGTTAAACCAACACCAAAGACGGAATTTTTGGGTGT 412 Query 299 ACCTATTGTGAGTCATGATATATCTTTGAAGCTTCCTAAAGAATTTGATGCTAGAACCGC 358 |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 413 GCCTATTGTAAGCCATGATATATCTTTGAAGCTTCCAAAAGAATTTGATGCTAGAACCGC 472 Query 359 TTGGTCACAGTGCACCAGTATTGGAAGGATCTTAGATCAGGGTCATTGTGGTTCATGCTG 418 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 473 TTGGTCACAGTGCACCAGTATTGGAAGGATCTTAGATCAGGGTCACTGTGGTTCTTGCTG 532 Query 419 GGCCTTTGGTGCTGTTGAATCACTGTCTGACAGATTCTGCATCAAATATAACATGAATAT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 533 GGCCTTTGGTGCTGTTGAATCACTGTCTGACAGATTCTGCATCAAATATAACATGAATGT 592 Query 479 TTCTTTATCTGTCAATGATCTCTTAGCATGTTGTGGATTCCTTTGCGGACAAGGTTGTAA 538 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 593 TTCTTTATCTGTCAATGATCTTTTAGCATGTTGTGGATTCCTTTGCGGTCAAGGTTGTAA 652 Query 539 CGGTGGATACCCAATTGCTGCGTGGCGGTACTTTAAGCACCACGGTGTAGTAACTGAAGA 598 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 653 TGGTGGATACCCAATTGCTGCGTGGCGGTACTTTAAGCACCACGGTGTAGTCACTGAAGA 712 Query 599 GTGTGATCCATACTTTGACAATACTGGCTGCTCTCACCCGGGATGTGAACCCGCTTACCC 658 ||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 713 GTGTGATCCATACTTCGACAATACTGGTTGCTCGCACCCGGGATGTGAACCCGCTTACCC 772 Query 659 TACACCAAAATGTGCGAGGAAATGTGTTAGCGGAAACCAGCTTTGGCGTGAATCAAAACA 718 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 773 TACACCAAAATGTGCAAGGAAATGTGTTAGCGGAAACCAGCTTTGGCGTGAATCAAAACA 832 Query 719 TTATGGTGTTAGCGCGTACAAGGTCAGATCTCACCCTGATGACATTATGGCAGAAGTTTA 778 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 833 TTATGGTGTTAGTGCGTACAAGGTCAGATCTCACCCTGATGACATTATGGCAGAAGTTTA 892 Query 779 CAAAAATGGACCTGTTGAGGTTGCCTTCACTGTTTACGAGGACTTTGCACATTACAAATC 838 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 893 CAAAAATGGACCTGTTGAGGTTGCCTTCACTGTTTACGAGGACTTTGCGCATTACAAATC 952 Query 839 AGGAGTGTACAAGCACATAACAGGTACTAACATTGGAGGTCATGCTGTTAAGCTTATTGG 898 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 953 TGGAGTGTACAAGCACATAACAGGTACTAACATTGGAGGTCATGCTGTTAAACTTATTGG 1012 Query 899 TTGGGGAACTTCTGATGACGGTGAAGATTATTGGTTGCTTGCAAATCAATGGAACCGAAG 958 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 CTGGGGAACTTCTGATGACGGTGAAGATTATTGGTTGCTTGCAAATCAATGGAACCGAAG 1072 Query 959 CTGGGGAGATGATGGTTACTTCAAGATCAGGAGAGGAACAAACGAATGTGGCATTGAACA 1018 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1073 CTGGGGTGATGATGGGTACTTCAAGATCAGGAGAGGAACAAACGAATGTGGCATTGAACA 1132 Query 1019 TGGTGTTGTAGCCGGTTTACCTTCAGACAGGAACGTATTTAAAGGTATTACTACTTCAGA 1078 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1133 TGGTGTTGTAGCTGGTTTACCTTCAGACAGGAACGTAGTTAAAGGTATTACTACTTCAGA 1192 Query 1079 TGATCTTCTTGTTTCCTCATTTTAAACAGGAAGATGTGTCTCTACT 1124 |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1193 TGATCTTCTTGTTTCCTCATTTTAAACAGGAATATGTGTCTCTACT 1238 > AT1G02300.1 | Symbols: | Cysteine proteinases superfamily protein | chr1:453288-455463 FORWARD LENGTH=1227 Length=1227 Score = 935 bits (506), Expect = 0.0 Identities = 657/731 (90%), Gaps = 6/731 (1%) Strand=Plus/Plus Query 398 GGGTCATTGTGGTTCATGCTGGGCCTTTGGTGCTGTTGAATCACTGTCTGACAGATTCTG 457 ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct 435 GGGTCATTGTGGTTCTTGCTGGGCATTTGGTGCTGTTGAATCACTGTCCGACAGGTTCTG 494 Query 458 CATCAAATATAACATGAATATTTCTTTATCTGTCAATGATCTCTTAGCATGTTGTGGATT 517 ||||||||||||| ||||| |||| ||||||| ||||||| || |||||||||||||||| Sbjct 495 CATCAAATATAACTTGAATGTTTCCTTATCTGCCAATGATGTCATAGCATGTTGTGGATT 554 Query 518 CCTTTGCGGACAAGGTTGTAACGGTGGATACCCAATTGCTGCGTGGCGGTACTTTAAGCA 577 |||||||| |||||||| ||||| | |||||| | ||| ||| |||||||||| | Sbjct 555 ACTTTGCGGTTTTGGTTGTAATGGTGGTTTCCCAATGGGTGCATGGTTGTACTTTAAGTA 614 Query 578 CCACGGTGTAGTAACTGAAGAGTGTGATCCATACTTTGACAATACTGGCTGCTCTCACCC 637 ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct 615 CCACGGTGTAGTAACCCAAGAGTGTGATCCATACTTTGACAATACTGGTTGCTCTCACCC 674 Query 638 GGGATGTGAACCCGCTTACCCTACACCAAAATGTGCGAGGAAATGTGTTAGCGGAAACCA 697 ||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||||||| Sbjct 675 GGGATGTGAACCCACTTACCCTACACCAAAATGTGAGAGGAAATGTGTAAGCAGAAACCA 734 Query 698 GCTTTGGCGTGAATCAAAACATTATGGTGTTAGCGCGTACAAG-GTCAGAT-CTCACCCT 755 ||| ||| ||||||||||||| |||||||| |||| ||| || ||| || || ||||| Sbjct 735 GCTATGGGGTGAATCAAAACACTATGGTGTCGGCGCATAC-AGAATCA-ATCCTGACCCT 792 Query 756 GATGACATTATGGCAGAAGTTTACAAAAATGGACCTGTTGAGGTTGCCTTCACTGTTTAC 815 | ||||||||||| || |||||||| ||||||||||| |||||||| || || |||||| Sbjct 793 CAAGACATTATGGCTGAGGTTTACAAGAATGGACCTGTCGAGGTTGCTTTTACCGTTTAC 852 Query 816 GAGGACTTTGCACATTACAAATCAGGAGTGTACAAGCACATAACAGGTACTAACATTGGA 875 ||||||||||||||||||||||||||||| |||||| ||||||| |||||||| |||||| Sbjct 853 GAGGACTTTGCACATTACAAATCAGGAGTATACAAGTACATAACGGGTACTAAGATTGGA 912 Query 876 GGTCATGCTGTTAAGCTTATTGGTTGGGGAACTTCTGATGACGGTGAAGATTATTGGTTG 935 |||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct 913 GGTCATGCAGTTAAGCTCATTGGCTGGGGAACTTCTGATGACGGCGAAGATTATTGGTTG 972 Query 936 CTTGCAAATCAATGGAACCGAAGCTGGGGAGATGATGGTTACTTCAAGATCAGGAGAGGA 995 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 973 CTTGCAAATCAATGGAACCGAAGCTGGGGTGATGATGGTTACTTCAAGATCAGGAGAGGA 1032 Query 996 ACAAACGAATGTGGCATTGAACATG-GTGTTGTAGCCGGTTTACCTTCAGACAGGAACGT 1054 || |||||||||||||||||||| | |||||||||| |||||||||||||| | |||||| Sbjct 1033 ACGAACGAATGTGGCATTGAACA-GAGTGTTGTAGCTGGTTTACCTTCAGAGAAGAACGT 1091 Query 1055 ATTTAAAGGTATTACTACTTCAGATGATCTTCTTGTTTCCTCATTTTAAACAGGAAGATG 1114 ||||||||||||||| ||||||||||||||||| ||||||||| | |||||| || |||| Sbjct 1092 ATTTAAAGGTATTACCACTTCAGATGATCTTCTGGTTTCCTCAGTCTAAACAAGACGATG 1151 Query 1115 TGTCTCTACTT 1125 |||| |||||| Sbjct 1152 TGTCCCTACTT 1162 Score = 449 bits (243), Expect = 2e-125 Identities = 290/313 (93%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 82 TTTCATCCTTCAACTTGCAGGGTATTGCAGCAGAAAATCTTTCCAAGCAGAAACTGACCT 141 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 59 TTTCATCCTTCAACTTGCAGGGTATTGCAGCGGAAAATCTTTCCAAGCAGAAACTGACCT 118 Query 142 CA-TGGATTCTTCAGAATGAGATTGTCAAGGAAGTCAATGAGAATCCAAACGCTGGATGG 200 || | ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 119 CACT-GATTCTTCAGAATGAGATTGTAAAGGAAGTCAATGAGAATCCAAACGCTGGTTGG 177 Query 201 AAAGCTGCTTTCAATGATCGGTTTGCAAACGTCACTGTTGCAGAGTTTAAGCGCCTTCTT 260 ||||||||||||||||||||||||||||| | ||| ||||||||||||||||| || || Sbjct 178 AAAGCTGCTTTCAATGATCGGTTTGCAAATGCCACCGTTGCAGAGTTTAAGCGACTCCTC 237 Query 261 GGTGTTAAACCAACACCAAAGACGGAATTTTTGGGTGTACCTATTGTGAGTCATGATATA 320 ||||||| || |||||||||||||| || || |||||||||||||| || |||||| || Sbjct 238 GGTGTTATACAAACACCAAAGACGGCATACTTAGGTGTACCTATTGTAAGACATGATTTA 297 Query 321 TCTTTGAAGCTTCCTAAAGAATTTGATGCTAGAACCGCTTGGTCACAGTGCACCAGTATT 380 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 298 TCGTTGAAGCTTCCTAAAGAATTTGATGCTAGAACCGCTTGGTCACATTGCACCAGTATT 357 Query 381 GGAAGGATCTTAG 393 |||||||||||| Sbjct 358 CGAAGGATCTTAG 370 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55170398955 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5