BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg919695 Length=1096 Score E Sequences producing significant alignments: (Bits) Value AT1G09400.1 | Symbols: | FMN-linked oxidoreductases superfamil... 1596 0.0 > AT1G09400.1 | Symbols: | FMN-linked oxidoreductases superfamily protein | chr1:3033512-3035036 REVERSE LENGTH=1182 Length=1182 Score = 1596 bits (864), Expect = 0.0 Identities = 1019/1096 (93%), Gaps = 1/1096 (0%) Strand=Plus/Plus Query 1 TTCCCCTTCTCACTCCATTCTCAATGAAAAACTTCAATCTTACTCACAGAATAGTTATGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 21 TTCCCCTTCTCACTCCATTCTCAATGAAAAACTTCAATCTTACTCACAGAATCGTTATGG 80 Query 61 CGCCGATGGCGAGAATGAGATCATACGGTAACGTTCCACAACCTCACGTCGCCTTGTATT 120 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 81 CGCCAATGGCGAGAATGAGATCATACGGTAACATTCCACAACCTCACGTCGCCTTGTATT 140 Query 121 ACTCTCAGAGAACAACTCCGGGAGGTCTTCTCATCAGCGAAGCCACCGGAGTTTCCGAAA 180 | | ||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 141 ATTGTCAAAGAACAACTCCGGGAGGTCTTCTCATCAGTGAAGCCACCGGAGTTTCTGAAA 200 Query 181 CCGCCATGGCGTATCAAAACATGCCAGGGATATGGAGGAAAGAACAAATCCAAGCATGGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 201 CCGCCATGGCGTATCAAAACATGCCAGGGATATGGAGGAAAGAACAAATCGAAGCATGGA 260 Query 241 AGCCCATCGTCGACGCCGTTCACTCTCACGGCGGCGTCTTCTTCTGCCAGCTATGGCACG 300 |||||||||| ||||| |||||||||||||||||| |||||||||||||||| ||||||| Sbjct 261 AGCCCATCGTTGACGCTGTTCACTCTCACGGCGGCATCTTCTTCTGCCAGCTCTGGCACG 320 Query 301 CTGGTCGCGTTTCTCATCGAGATTGTCAGCCAAATGGAGAAGCTCCGGTCTCTTCTACGG 360 |||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || | Sbjct 321 CTGGTCGCGTTTCTCATCAAGATTGTCAGCCAAATGGAGAATCTCCGGTCTCTTCAACAG 380 Query 361 ATAAGCCATTCGTCGAGGATCCATCGAATGAGTTCACTCCTCCGAGAAGGCTAAGAACTG 420 |||||||||||| ||| ||||||||||||||||| || |||||||||||| ||||||||| Sbjct 381 ATAAGCCATTCGCCGATGATCCATCGAATGAGTTTACACCTCCGAGAAGGTTAAGAACTG 440 Query 421 ACGAAATCCCGACAATTGTCAATGATTTTCGTCTCGCTGCAAGAAACGCAATCGAAGCTG 480 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 441 ACGAAATCCCGACAATTATCAATGATTTTCGTCTCGCTGCAAGAAACGCAACCGAAGCTG 500 Query 481 GTTTCGACGGAGTGGAGATCCATGGAGCTCACGGGTATTTGCTCGACCAGTTTGTGAAAG 540 |||| || ||||| ||||||||||||||||||||||| ||| | ||||||||| |||||| Sbjct 501 GTTTTGATGGAGTAGAGATCCATGGAGCTCACGGGTACTTGATTGACCAGTTTATGAAAG 560 Query 541 ACTCTGTTAACGATCGAACCGATAGGTACGGCGGATCTCTAGAGAATCGATGCAGATTCG 600 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 561 ACTCTGTTAACGATCGAACCGATAGTTACGGCGGATCTCTAGAGAATCGATGTAGATTCG 620 Query 601 CTTTACAAGTTATAGAAGCGGTCTCGAACGAGATCGGACCTGATCGTGTCGGAATCAGAC 660 |||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 621 CTTTACAAGTAATCGAAGCGGTTTCGAAAGAGATCGGACCTGATCGTGTCGGAATCAGAC 680 Query 661 TCTCTCCGTTCGCTAATTACATGGAATCAGGAGATTCAGACCCAAAAAGATTAGGGCTTT 720 |||| ||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||| Sbjct 681 TCTCACCGTTCGCTGATTACATGGAATCCGGAGATACAGATCCAAAAAGATTAGGGCTTT 740 Query 721 ACATGGCAAACTCTCTGAACAGATTCGAGATACTCTACTGTCACATGGTCGAGCCTAGAA 780 ||||||| || ||||| ||||||||||||||||||||||| |||||| | |||||||| | Sbjct 741 ACATGGCCAAGTCTCTCAACAGATTCGAGATACTCTACTGCCACATGATTGAGCCTAGGA 800 Query 781 TGAAAACAGCCAGTGAGATTTTCGAGTGCACGGAATCACTTACGCCGATGAGAAAGGCGT 840 ||||||| | |||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 801 TGAAAACCGTCAGTGAGATTTTCGAGTGCAGGGAATCACTTACGCCGATGAGAAATGCGT 860 Query 841 TTAATGGAGCGTTCATTGTCGCCGGAGGTTATACAAGAGAAGACGGGAACAAGGCGGTGG 900 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 861 TTAATGGAACGTTCATTGTCGCCGGAGGTTATACAAGAGAAGACGGAAACAAGGCGGTGG 920 Query 901 CAGAGGAAAGAACAGATCTTGTGGCGTACGGACGACTGTTCTTGGCTAATCCAGATTTGC 960 |||||| ||||||||||||||| ||||||||| || ||||||| |||||||| ||||||| Sbjct 921 CAGAGGGAAGAACAGATCTTGTAGCGTACGGAAGATTGTTCTTAGCTAATCCTGATTTGC 980 Query 961 CTAGAAGGTTCGAGCTCGATGCCCCGCTGAATAAGTACGACAGACCAAGTTTCTATAGTT 1020 ||| |||||| |||||| |||| |||||||||||||| ||||||||||||||||| |||| Sbjct 981 CTAAAAGGTTTGAGCTCAATGCTCCGCTGAATAAGTAAGACAGACCAAGTTTCTACAGTT 1040 Query 1021 CTGATCATGCCGTTGGTTATACTGATTACCCTTTTCTCGACACCACAGATCAATAAAACC 1080 |||||| || | |||||| |||||||||||||||||||| ||||||||||||||| || Sbjct 1041 CTGATCCTGTTGCTGGTTACACTGATTACCCTTTTCTCGATACCACAGATCAATAAGACA 1100 Query 1081 -GTGTCTTGTTCAATC 1095 | ||||||||||||| Sbjct 1101 AGAGTCTTGTTCAATC 1116 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53714583150 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5