BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg919779 Length=1207 Score E Sequences producing significant alignments: (Bits) Value AT1G10070.1 | Symbols: ATBCAT-2, BCAT-2 | branched-chain amino ... 2006 0.0 > AT1G10070.1 | Symbols: ATBCAT-2, BCAT-2 | branched-chain amino acid transaminase 2 | chr1:3288087-3290471 FORWARD LENGTH=1642 Length=1642 Score = 2006 bits (1086), Expect = 0.0 Identities = 1159/1195 (97%), Gaps = 2/1195 (0%) Strand=Plus/Plus Query 15 AAGAAGATGATCAAAGCAATCTCATCTCTACGCAAAACTCTGGTTCTACCTCTTCATTTA 74 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 163 AAGAAGATGATCAAAACAATCACATCTCTACGCAAAACTCTGGTTCTACCTCTTCATTTA 222 Query 75 CATATTCGTACGCTACAAACTTTCGCTAAGTACAACGCACAAGCTGCCTCGGCCTTGCGA 134 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct 223 CATATTCGTACGCTACAAACTTTCGCCAAGTACAACGCACAAGCTGCATCGGCTTTGCGA 282 Query 135 GAAGAGCGTAAGACACCTCTTTATCAAAATGGAGATGATGAATATGTGGATTTGGATTGG 194 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 283 GAAGAGCGTAAGAAACCTCTTTATCAAAATGGAGATGATGTATATGCGGATTTGGATTGG 342 Query 195 GATAATCTCGGGTTTGGTCTAACTCCAGCTGATTACATGTATGTCATGAAATGCTCAAAA 254 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 343 GATAATCTCGGGTTTGGTCTAAATCCAGCTGATTACATGTATGTCATGAAATGCTCAAAA 402 Query 255 GACGGCGAATTCACTCAAGGAGAACTTAGTCCCTATGGGAATATTCAGCTAAGTCCTTCT 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GACGGCGAATTCACTCAAGGAGAACTTAGTCCCTATGGGAATATTCAGCTAAGTCCTTCT 462 Query 315 GCTGGAGTCTTAAACTATGGACAGGCGATATACGAAGGTACAAAAGCATACAGGAAAGAA 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 463 GCTGGAGTCTTAAACTATGGACAGGCGATATACGAAGGTACAAAAGCATACAGGAAAGAA 522 Query 375 AATGGGAAGCTTCTTTTGTTTCGCCCTGATCACAACGCTCTCCGGATGAAGCTTGGCGCT 434 ||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||| Sbjct 523 AATGGGAAGCTTCTTTTGTTTCGTCCGGATCACAACGCTATCCGGATGAAGCTTGGCGCT 582 Query 435 GAACGGATGCTCATGCCTTCTCCTTCGATTGATCAGTTTGTTAATGCAATTAAACAAACC 494 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 583 GAACGGATGCTCATGCCTTCTCCTTCGGTTGATCAGTTTGTTAATGCAGTTAAACAAACC 642 Query 495 GCTCTTGCAAACAAGCGTTGGGTTCCTCCTTCAGGAAAAGGGACTTTGTACATTAGGCCT 554 |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 643 GCTCTTGCAAACAAACGTTGGGTTCCTCCTGCAGGGAAAGGGACTTTGTACATTAGGCCT 702 Query 555 TTGTTGATGGGAAGTGGTCCAATTCTTGGTTTAGGTCCTGCACCTGAATTTACATTCATT 614 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 703 TTGTTGATGGGAAGTGGTCCAATACTTGGTTTAGGTCCTGCACCTGAATATACATTCATT 762 Query 615 GTCTATGCATCTCCAGTTGGTAACTACTTCAAGGAAGGGATGGCTGCTCTTAACCTCTAT 674 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 763 GTCTATGCATCTCCAGTTGGTAACTACTTCAAGGAAGGGATGGCTGCTCTTAACCTCTAT 822 Query 675 GTTGAGGAAGAATATGTCCGAGCAGCTCCTGGTGGAGCTGGAGGTGTCAAGAGCATCACA 734 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 823 GTTGAGGAAGAATATGTCCGAGCGGCTCCTGGTGGAGCTGGAGGCGTCAAGAGCATCACA 882 Query 735 AATTATGCACCCGTTTTGAAAGCACTGAGCAGAGCCAAGAGTCAGGGGTTTTCAGACGTT 794 |||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 883 AATTATGCGCCAGTTTTGAAAGCACTGAGCAGAGCCAAGAGTCGGGGGTTTTCAGACGTT 942 Query 795 CTTTATCTCGACTCTGTCAAGAAGAAGTATTTAGAGGAGGCTTCTTCTTGCAACGTCTTT 854 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 943 CTTTATCTCGACTCTGTCAAGAAGAAGTACTTAGAGGAGGCTTCTTCTTGCAACGTCTTT 1002 Query 855 GTTGTCAAGGGTCGGACAATCTCAACTCCTGCAACTAATGGAACAATTCTTGAAGGAATT 914 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1003 GTTGTCAAGGGTCGGACAATCTCAACTCCTGCAACTAATGGAACAATTCTTGAAGGGATT 1062 Query 915 ACGCGGAAAAGTGTGATGGAGATCGCAAGTGATCAAGGGTATCAGGTAGTAGAGAAGGCA 974 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1063 ACGCGGAAAAGTGTGATGGAGATCGCAAGTGATCAAGGTTATCAGGTAGTAGAGAAGGCA 1122 Query 975 GTTCATGTGGATGAAGTAATGGATGCAGATGAAGTTTTTTGCACCGGAACTGCCGTAGTA 1034 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1123 GTTCATGTGGATGAAGTAATGGATGCAGATGAAGTTTTTTGCACCGGAACTGCTGTAGTA 1182 Query 1035 GTTGCTCCTGTGGGCACTATAACATATCAGGACAAAAGAGTAGAGTATAAAACCGGGGAT 1094 |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 1183 GTTGCTCCCGTGGGCACTATCACATATCAGGAAAAAAGAGTAGAGTATAAAACCGGGGAT 1242 Query 1095 GAATCTGTCTGCCAGAAACTGCGTTCAGTCCTTGTCGGTATCCAGACAGGATTGATTGAA 1154 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 1243 GAATCTGTCTGCCAGAAACTGCGTTCAGTCCTCGTAGGTATCCAGACAGGATTGATTGAA 1302 Query 1155 GATAACAAGGGATGGGTCACAAATATCAACTGAA-AA-AACAATCTTCAATATTT 1207 ||||||||||||||||||||| |||||||||||| || ||||||||||||||||| Sbjct 1303 GATAACAAGGGATGGGTCACAGATATCAACTGAAGAATAACAATCTTCAATATTT 1357 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59286843645 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5