BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg920022

Length=769
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G11930.1 | Symbols:  | Predicted pyridoxal phosphate-depende...  1227    0.0  


> AT1G11930.1 | Symbols:  | Predicted pyridoxal phosphate-dependent 
enzyme, YBL036C type | chr1:4028692-4030535 FORWARD LENGTH=1102
Length=1102

 Score = 1227 bits (664),  Expect = 0.0
 Identities = 735/770 (95%), Gaps = 2/770 (0%)
 Strand=Plus/Plus

Query  1    AACACGTGGCGGATTCTACTATGTCTGCGGCGGCGATTGATGGCGTGGCGGCTTTGAGAT  60
            ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||
Sbjct  117  AACACGTGGCGGATTCTACTATGTCGGCGGCGGCGATTGATGGTGTGGCGGCTCTGAGAT  176

Query  61   CGGTGTTTCAGCGGGTAAACCAAGCGGCGGAGAAAGCGGGTCGTGTGTCGGATCGA-ATA  119
            |||||||||||||||||||||| |||||||||||||||||||||| |||||||| | |||
Sbjct  177  CGGTGTTTCAGCGGGTAAACCAGGCGGCGGAGAAAGCGGGTCGTGGGTCGGATC-AGATA  235

Query  120  CGGATCGTAGCGGTGAGCAAGACGAAACCAGTTTCTCTGATTCGTCAAGTATACGAGGCT  179
            ||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct  236  CGGGTCGTAGCGGTGAGTAAGACGAAACCAGTTTCTCTGATTCGCCAAGTATACGACGCT  295

Query  180  GGACATAGGTCTTTTGGTGAGAATTATGTGCAAGAGATCATTGAGAAGGCACCTCAGCTT  239
            || || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  296  GGTCAGAGGTCTTTTGGAGAGAATTATGTGCAAGAGATCATTGAGAAGGCACCTCAGCTT  355

Query  240  CCAGAAGATATAGAGTGGCATTTCATTGGGAATTTGCAGAGCAACAAAGTGAAGCCTCTG  299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct  356  CCAGAAGATATAGAGTGGCATTTCATTGGGAATTTGCAGAGCAACAAAGTGAAGCCTTTG  415

Query  300  CTATCTGGAGTTCCTAACCTTGTGATGGTGGAAAGTGTTGATGATGAAAAGATAGCAAAT  359
            |||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||
Sbjct  416  CTATCTGGTGTTCCTAACCTTGTGACCGTGGAAAGTGTTGATGATGAAAAGATTGCAAAT  475

Query  360  ATGCTTGATCGTGTGGTTGGAAATATCGGTAGAAAGCCCTTGAAGGTCTTGGTCCAAGTG  419
            |||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||
Sbjct  476  ATGCTTGATCGTGTGGTTGGTAATATCGGAAGAAAGCCCTTGAAGGTATTTGTCCAAGTG  535

Query  420  AACACCAGTGGCGAAGAGTCTAAGTTCGGCGTGGACCCCTCAGGATGCGTAGGACTGGCG  479
            || |||||||| ||||| ||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct  536  AATACCAGTGGTGAAGACTCTAAATTCGGCGTGGAACCCTCGGGATGCGTAGGACTGGCG  595

Query  480  AAACATGTGAAGGAAGCTTGCTCGAATCTTGAGTTTTCTGGATTGATGACAATAGGGATG  539
            ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  596  AAACACGTGAAGGAAGCTTGCTCGAATCTTGAGTTTTCTGGTTTGATGACAATAGGGATG  655

Query  540  GCTGATTACACTTCAACCCCAGAGAATTTCAAGTTGCTTGCGAAATGCAGAAGTGAAGTG  599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  656  GCTGATTACACTTCAACCCCAGAGAATTTCAAGTTGCTTGCGAAATGCAGAAGTGAAGTG  715

Query  600  TGTAAAGAGCTTGGAATACCGGAGGAGCAATGTGAGCTATCTATGGGGATGTCTGGTGAC  659
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  716  TGTAAGGAGCTTGGAATACCGGAGGAGCAATGTGAGCTATCTATGGGGATGTCTGGTGAC  775

Query  660  TTTGAACTAGCTTTACAGATTGAACTGGGAAGCACAAATGTGAGAATAGGATCTACAATT  719
            ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  776  TTTGAACTAGCATTGCAGATTGAACTGGGAAGCACAAATGTGAGAATAGGATCTACTATT  835

Query  720  TTCGGGGCGAGAGAGTATCCTAAGAAGTAATGATGTAAACTACTGAGTGA  769
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  836  TTCGGGGCGAGAGAGTATCCTAAGAAGTAATGATGTAAACTACTGAGTGA  885



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 37374205368


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5