BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920164 Length=1221 Score E Sequences producing significant alignments: (Bits) Value AT1G12990.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransfer... 2028 0.0 AT3G27540.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransfer... 412 3e-114 AT5G14480.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransfer... 302 7e-81 AT3G26445.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransfer... 206 5e-52 > AT1G12990.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransferase family protein | chr1:4433640-4436075 FORWARD LENGTH=2035 Length=2035 Score = 2028 bits (1098), Expect = 0.0 Identities = 1180/1220 (97%), Gaps = 4/1220 (0%) Strand=Plus/Plus Query 4 GGTGGATCTGA-TACTGGGATGTGGTGGATGATGGGAGAAGCTGGTGGACATTACTGTTC 62 ||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 316 GGTGGATCTGAGT-TTGGGATGTGGTGGATGATGGGAGAAGCTGGTGGGCATTACTGTTC 374 Query 63 TAAGAAGACTGATGATATCTGCGGTGGTGTTTGTAGTCAGGAACCTGGAAGATTCTTCAG 122 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 375 TAAGAAGACTGATGATATCTGCGGCGGTGTTTGTAGTCAGGAACCTGGAAGATTCTTCAG 434 Query 123 CTTTTCTAGACTTTGTTGTGCTCTTCGTGGTGTTGATATGAAGACTTATATCTTCTTATT 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 435 CTTTTCTAGACTTTGTTGTGCTCTTCGTGGTGTTGATATGAAGACTTATATCTTCTTATT 494 Query 183 AGTGATTGTTCCCACATGTGTACTCGCTGGTTATGTCCACGGTCAGAAGATTTCTTACTT 242 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 495 AGTGATTGTTCCCACATGTGTACTCGCTGGCTATGTCCACGGTCAGAAGATTTCTTACTT 554 Query 243 TCTCCGGCCATTATGGGAATCACCACCTAAACCTTTTCATGACATTCCTCATTACTACCA 302 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 555 TCTCCGGCCTTTATGGGAATCACCACCTAAACCTTTTCATGACATTCCTCATTACTACCA 614 Query 303 TGAGAATGCTTCTATGGAGACTCTTTGTAAACTCCATGGCTGGGGTGTACGAGAATACCC 362 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 615 CGAGAACGCTTCTATGGAGACTCTTTGTAAACTCCATGGCTGGGGTGTTCGAGACTACCC 674 Query 363 TAGACGAGTTTATGATGCGGTTTTGTTCAGTAACGAGCTTGATATCCTCGCTGTTCGGTG 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 675 TAGACGAGTTTATGATGCGGTTTTGTTCAGTAACGAGCTTGATATCCTCGCTGTTCGTTG 734 Query 423 GAGAGAATTGTTTCCTTACATCACTCAGTTTGTCCTTCTAGAATCAAACACGACGTTCAC 482 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 735 GAGAGAATTGTTTCCTTACATCACTCAGTTTGTCCTCCTTGAATCAAACACGACGTTCAC 794 Query 483 TGGGTTGCCTAAGCCTCTTGTGTTTGCTGCTCACCGAGATGAGTTCAAGTTTATCGAGTC 542 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 795 TGGCTTGCCTAAGCCTCTTGTCTTTGCTGCTCACCGAGATGAGTTCAAGTTTATTGAGTC 854 Query 543 ACGCTTGACTTATGGTACTGTTGGTGGAAGATTTGTCAAAGGGCAGAATCCGTTTTACGA 602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 855 ACGCTTGACTTATGGTACTGTTGGTGGAAGATTTGTCAAAGGGCAGAATCCGTTTTACGA 914 Query 603 AGAGGCTTATCAGCGAGTAGCTCTAGATCAGCTTCTGAGAATCGCTGGGATTACTGATGA 662 |||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 915 AGAGGCGTATCAGCGGGTAGCTCTTGATCAGCTTCTGAGAATCGCTGGGATTACTGATGA 974 Query 663 TGACTTGTTGTTAATGTCTGATGTTGATGAGATTCCAAGTAGACACACCATTAACCTTTT 722 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 975 TGACTTGTTGTTAATGTCTGATGTCGATGAGATTCCAAGTAGACACACCATTAACCTTTT 1034 Query 723 AAGGTGGTGCGATGATATCCCGAAGATCCTTCATCTGCGGCTCAAGAACTATCTTTACTC 782 || ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1035 GAGATGGTGCGATGAGATCCCGAAGATACTTCATCTGCGCCTCAAGAACTATCTTTACTC 1094 Query 783 GTTCGAATTCCTTGTTGATAACAAGAGCTGGAGAGCTTCCGTCCACAGATATGAGACGGG 842 ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 1095 GTTTGAATTCCTTGTTGATAACAAAAGCTGGAGAGCTTCCATCCACAGATATGAGACGGG 1154 Query 843 TAAGACACGGTATGCTCATTATCGACAGTCGGATGAAATCTTGGCGGATGCAGGATGGCA 902 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1155 TAAGACACGGTATGCTCATTATCGACAGTCTGATGAAATCTTGGCGGATGCAGGATGGCA 1214 Query 903 CTGTAGCTTTTGCTTCCGACGGATCAGTGAGTTTATATTCAAGATGAAAGCTTATAGCCA 962 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1215 TTGTAGCTTTTGCTTCCGACGAATCAGTGAGTTTATATTCAAGATGAAAGCTTATAGCCA 1274 Query 963 TAATGATAGAGTGAGGTTTGGTCATTTCTTGAATCCTAAGAGAGTTCAAAGAGTTATATG 1022 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1275 TAATGACAGAGTGAGGTTTGGTCATTTCTTGAATCCTAAGAGAGTTCAAAGAGTTATATG 1334 Query 1023 CAAAGGAGCTGATCTTTTCGATATGCTTCCC-GAAGAGTATACCTTCAAGGAGATAATAG 1081 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 1335 CAAAGGAGCTGATCTTTTCGATATGCT-CCCTGAAGAGTATACCTTCAAGGAGATAATAG 1393 Query 1082 GAAAAATGGGTCCAATCCCGCATTCTTTCTCAGCCGTTCATCTTCCTTCGTATCTCCTGG 1141 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1394 GAAAAATGGGTCCAATCCCGCATTCTTTCTCAGCTGTTCATCTTCCTTCGTATCTCCTGG 1453 Query 1142 AAAACGCGGATAAGTACAGATTCCTCTTACCGGGAAATTGCATAAGAGAAACCGAATGAT 1201 |||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||| Sbjct 1454 AAAACGCGGATAAGTACAGATTTCTCTTGCCGGGAAATTGCATAAGAGAAAGCGAATGAT 1513 Query 1202 CGATCGAATCTTCACCACAT 1221 || ||||||||||||||||| Sbjct 1514 CGTTCGAATCTTCACCACAT 1533 > AT3G27540.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransferase family protein | chr3:10205308-10207306 FORWARD LENGTH=1772 Length=1772 Score = 412 bits (223), Expect = 3e-114 Identities = 736/974 (76%), Gaps = 74/974 (8%) Strand=Plus/Plus Query 256 TGGGAATCACCACCTAAACCTTTTCATGA-CATTCCTCATTACTACCATGAGAATGCTT- 313 ||||||||||| || || || ||||| | ||||||||||||||| ||||||||| || Sbjct 398 TGGGAATCACCTCCGAAGCCATTTCA-AACCATTCCTCATTACTATAATGAGAATG-TTA 455 Query 314 CTATGGAGA-CTCTTTGTAAACTCCATGGCTGGGG--TGTACGAGAATAC-CCTAGACGA 369 ||||||| | |||| |||| || ||||| ||||| | || |||| | | || ||||| Sbjct 456 CTATGGA-ATCTCTCTGTAGTCTTCATGGTTGGGGAAT-TA-GAGACT-CGCCCAGACGG 511 Query 370 GTTTAT-GATGCGGTTTTGTTCAGTAACGAGCTTGATATCCTCGCTGTTCGGTGG-A-GA 426 |||| | || ||||||||||| ||||| ||| ||| | | ||||| | ||| | || Sbjct 512 GTTT-TCGACGCGGTTTTGTTTAGTAATGAGAAAGATCTTTTAACTGTTAGATGGAATGA 570 Query 427 GAATTGTTTCCTTACATCACTCAGTTTGTCCTTCTAGAATCAAACACGACGTTCACTGGG 486 | || | ||||||| | || |||||||| |||| ||||| || | ||||| ||||| Sbjct 571 G-CTT-TATCCTTACGTGACACAGTTTGTGATTCTTGAATCTAATTCTACGTTTACTGGT 628 Query 487 TTGCCTAAGCCTCTT-GTGTTTGCTG-CTCACCGA-GATGAGTTCAAGTTTATCGAGTCA 543 |||||||| || || |||||| | | | | ||| |||| |||||| | ||| | Sbjct 629 TTGCCTAAACC-ATTGGTGTTT-AAGAGT-AATAAGGATCAGTTTAAGTTTGTGGAGCCG 685 Query 544 C-GCTTGACTTATGGTACTG-TTGGTGGAAGATTT-GTCAAAGGGC-AGAATCCGTTT-T 598 | || | |||||||| || | |||||||| | ||| | ||| ||| ||||||||||| | Sbjct 686 CGGC-TAACTTATGGGAC-GATTGGTGGACGGTTTAG-GAAA-GGCGAGAATCCGTTTGT 741 Query 599 ACGAAGAGGCTTATCAGCGAGTAGC-TCTAGATCAGCTT-CTGAGAATCGCTGGGATTAC 656 |||||| || ||||||||||| || | | |||||| || || || || ||||| ||| | Sbjct 742 -CGAAGAAGCGTATCAGCGAGTTGCGT-TGGATCAG-TTGCTTAGGATTGCTGGTATT-C 797 Query 657 -TGATGATGACTTGTTGTTAATGTCTGATGTTGATGAGATTCCAAGTAG-ACACACCATT 714 || ||||| |||||| ||||||||||||||||||||||||| ||| | || || || Sbjct 798 AAGAAGATGATTTGTTGATAATGTCTGATGTTGATGAGATTCCTAGT-GCTCATACTATC 856 Query 715 AACCTTTTAAGGTGGTGCGATGATA-TCC-CGAAGATCCTTCATCTGCGGCTCAAGAACT 772 || ||||| || ||||| ||||||| ||| | || | ||||| || | | | ||||| | Sbjct 857 AATCTTTTGAGATGGTGTGATGATATTCCTC-CAG-TTCTTCACCTTCAGTTGAAGAATT 914 Query 773 ATCTT-TACTCGTTCGAATTCCT-TGTTGATAACAAGAGCTGGAGAGCTTCCGTCCACAG 830 || || || || |||||| | || ||| |||| ||||||||||||||| || | ||| | Sbjct 915 AT-TTGTATTCTTTCGAA-TACTATGTCGATAGCAAGAGCTGGAGAGCGTCTATACACCG 972 Query 831 ATATGAG-AC-GGGTAAGACACGGTATGCTCATTAT-CGACAGTCG-GATGAAATCTTGG 886 || || | ||| || || ||||||||||||| | || ||| | ||| || || | Sbjct 973 TTA-CAGTCCAGGG-AAAACGCGGTATGCTCATT-TCCGTCAG-AGTAATGTTATGTTAG 1028 Query 887 CGGATGCAGGATGGCACTGTAGCTTTTGCTTCCGACGGATCAGTGAGTTTATATTCAAGA 946 | ||| | |||||||| |||||||| || ||||| || ||||||||||||||||||| Sbjct 1029 CTGATTCTGGATGGCATTGTAGCTTCTGTTTCCGTTATATAAGTGAGTTTATATTCAAGA 1088 Query 947 TGAAAGCTTATAGCCATA-ATGATAGAGTGAGGTT-TGGTCATTTCTTGAATCCTAAG-A 1003 ||||||||||||| ||| | || | || || || | ||||| | ||||||| ||| | Sbjct 1089 TGAAAGCTTATAGTCATTCA-GACCGTGTCAGATTCTC-TCATTACCTGAATCC-AAGGA 1145 Query 1004 G-AGTTCAAAGA-GTTATATGCAAAGGAGCTGATCT-TTTCGATATGCTTCCC-GAAGAG 1059 | | ||||| || ||||| ||||||||| ||||| | ||| |||||| || || ||||| Sbjct 1146 GGA-TTCAA-GATGTTATTTGCAAAGGAACTGATTTGTTT-GATATG-TTACCTGAAGAA 1201 Query 1060 TATACCTTCAAGGAGATAATAGGAAAAATGGGTCCAATCCCGCATTCTT-TCTCAGCCGT 1118 || || ||||||||||| ||||| |||||||| || | || | |||| | ||||| || Sbjct 1202 TACACATTCAAGGAGATTATAGGCAAAATGGGACCTGTACCTCGGTCTTAT-TCAGCGGT 1260 Query 1119 TCATCTTCCTTCGTATCTCCTGGAAAACGCGGATAAGTACAGATTCCTCTTACCGGGAAA 1178 ||||||||||||||| || ||| | ||||| || |||||| || | | || || || || Sbjct 1261 TCATCTTCCTTCGTACCTACTGTATAACGCCGAGCAGTACAAATACTTGTTGCCTGGTAA 1320 Query 1179 TTGCATAAGAGAAA 1192 |||||||||||||| Sbjct 1321 TTGCATAAGAGAAA 1334 > AT5G14480.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransferase family protein | chr5:4667774-4670106 FORWARD LENGTH=1787 Length=1787 Score = 302 bits (163), Expect = 7e-81 Identities = 720/978 (74%), Gaps = 82/978 (8%) Strand=Plus/Plus Query 256 TGGGAATCACCACCTAAA-CCTTTTCATGAC-ATTCCTCATTACTACCATGAGAATGCTT 313 |||||||| ||||| ||| || ||||| || | || ||||||||||||||||| || | Sbjct 430 TGGGAATCTCCACC-AAAGCCGTTTCA-AACGCTACCCCATTACTACCATGAGAACGCCT 487 Query 314 CTATGG-AGACTCTTTGTAAACTCCATGGCTGGGGTGTA-CGAGAATAC-CCTAGACGAG 370 | |||| | || || || | || ||||||| || | || |||| | || ||| | | Sbjct 488 CCATGGCA-ACACTCTGCAGTCTTCATGGCT-GGAAACACCGTGAAT-CTCCGAGAAGGG 544 Query 371 T-TTATGATGCGGTTTTGTTCAGTAACG-AGCTTGATATCCTCGCTGTTCGGTGGAGAGA 428 | || |||||| || |||||||| || | || ||||||| || || | ||||||| ||| Sbjct 545 TCTT-TGATGCTGTGTTGTTCAGCAATGAAG-TTGATATGCTTACTATCCGGTGGAAAGA 602 Query 429 -ATTGTTTCCTTACATCACTCAGTTTGTCCTTCTAGAATCAAACACGACGTTCACTGGGT 487 || | ||||||||| || |||||||| | || ||||||||| | || |||||||| | Sbjct 603 GCTT-TATCCTTACATAACACAGTTTGTGATCCTTGAATCAAACTCTACTTTCACTGGTT 661 Query 488 TGCCTAAGCCTCTTGTGTTTGC--TGCTCACCGAGATG-AGTTCAAGTTTATC-GAGTC- 542 ||||||| ||| ||| |||| | || | |||| | ||||| ||||| | ||| | Sbjct 662 TGCCTAAACCT-TTG-GTTTTCAATGGGAATCGAG-CGAAGTTCGAGTTT-GCTGAGCCG 717 Query 543 ACGCTTGACTTAT-GGTACTGTTGGTGGAAGATTTGTCAAAGG-GCAGAATCCGTTT-TA 599 | || ||| |||| || || ||| ||| |||| ||||| | | || |||||| | Sbjct 718 AGGC-TGAGTTATGGGAAC-ATTGCAGGACGATTCAAGAAAGGAG-AAAACCCGTTTGT- 773 Query 600 CGAAGAGGCTTATCAG-CGAGTAGC-TCTAGATCAGCTTCTGAGAATCGCTGGGATTA-C 656 ||||| ||||| ||| || | || | | |||||||| | ||| | ||||| | || Sbjct 774 GGAAGAAGCTTACCAGAGGA-TTGCAT-TGGATCAGCTGATCAGACTGGCTGGTA-TAGA 830 Query 657 TGATGATGACT-TGTTGTTAATGTCTGATGTTGATGAGATTCCAAGTAG-ACACACCATT 714 || ||||| | ||||| ||||||||||||||||||||||||| || | || ||||| Sbjct 831 AGAAGATGA-TCTGTTGATAATGTCTGATGTTGATGAGATTCCTAG-CGCTCATACCATC 888 Query 715 AACCT-TTTAAGGTGGTGCGAT-GATATCCCGA-AGATCCTTCATCTGCGGCTCAAGAAC 771 || || || || ||||||||| |||| ||| | ||| |||||||| | | | || ||| Sbjct 889 AATCTGCTT-AGATGGTGCGATGGATA-CCC-ACCGATTCTTCATCTTCAGTTGAAAAAC 945 Query 772 TATCTT-TACTCGTTCGAATTCCTT-GTTGATAACAAGAGCTGGAGAGCTTCCGTCCA-C 828 || ||| ||||| |||| | | ||| ||||| ||||| |||||||||||||| | || | Sbjct 946 TA-CTTATACTCATTCG-AGTACTTCGTTGACAACAAAAGCTGGAGAGCTTCTATTCATC 1003 Query 829 AGATATGAGAC-GGGTAAGACACGGTATGCTCATTATCGACAGTCGGATG-AA-A-TC-- 882 || || || | ||| ||||| || || ||||||| || | ||| | | || | || Sbjct 1004 AG-TACAAGCCTGGG-AAGACTCGATACGCTCATT-TC--C-GTC-AAGGCAACACTCTT 1056 Query 883 TTGGCGGATGCAGGATGGCACTGTAGCTTT-TGCTTCCGACGGATCAGTGAGTTTATATT 941 || || ||| | || ||||| || || ||| || ||| | | ||||||||||||||||| Sbjct 1057 TTAGCAGATTCTGGTTGGCATTGCAG-TTTCTGTTTCAGGCACATCAGTGAGTTTATATT 1115 Query 942 CAAGATGAAAGCTTATAGCCATAATGATAGAGTGAGGTT-TGGTCATT-TCTTGAATCCT 999 |||||||||||| || || || ||||| | || || || | ||||| ||| || || Sbjct 1116 CAAGATGAAAGCGTACAGTCACAATGACCGGGTCAGATTCTC-TCATTATCTA-AACCCA 1173 Query 1000 AAGAGAGTTCAAAGA-GTTATATGCAAAGGAGCTGATCTTTTCGATATGCTTCCCGAAGA 1058 || ||| | ||| || || || || |||||| ||||||| |||||||||||||| ||||| Sbjct 1174 AAAAGAATACAA-GATGTGATCTGTAAAGGAACTGATCTGTTCGATATGCTTCCTGAAGA 1232 Query 1059 GTATACCTTCAAGGAGATAATAGGAAAAATGGGTCCAATCCCGCATTCTT-TCTCAGCCG 1117 |||||| |||| ||| || || || ||| | ||||||||||||| |||| | || || | Sbjct 1233 GTATACGTTCAGGGAAATCATCGGGAAACTAGGTCCAATCCCGCGGTCTTAT-TCCGCAG 1291 Query 1118 TTCATCTTCCTTCGT-ATCTCCTGGAAAACGCGGATAAGT-ACAGATTCCTCTTACC-GG 1174 ||||||| || | | |||| | ||||| || || | || ||| || | | ||||| || Sbjct 1292 TTCATCTACCAGC-TCATCTGATAGAAAAAGCTGAGA-GTTACAAATACTTGTTACCTGG 1349 Query 1175 GAAATTGCATAAGAGAAA 1192 ||| | ||||||| |||| Sbjct 1350 GAACT-GCATAAGGGAAA 1366 > AT3G26445.1 | Symbols: | beta-1,4-N-acetylglucosaminyltransferase family protein | chr3:9680120-9680746 REVERSE LENGTH=357 Length=357 Score = 206 bits (111), Expect = 5e-52 Identities = 172/202 (85%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 663 TGACTTGTTGTTAATGTCTGATGTTGATGAGATTCCAAGTAGACACACCATTAACCTTTT 722 ||| |||||| |||||||||||||||||||||| || |||||||| || | |||||||| Sbjct 141 TGATTTGTTGATAATGTCTGATGTTGATGAGATCCCGAGTAGACATACTGTAAACCTTTT 200 Query 723 AAGGTGGTGCGATGATATCCCGAAGATCCTTCATCTGCGGCTCAAGAACTA-TCTTTACT 781 || |||||| |||| || || |||||| |||||| |||||||||||| | |||||| | Sbjct 201 GAGATGGTGCAATGAGATTACGCAGATCCCTCATCTACGGCTCAAGAAC-AGTCTTTATT 259 Query 782 CGTTCGAATTCCTTGTTGATAACAAGAGCTGGAGAGCTTCCGTCCACAGATATGAGACGG 841 |||| || |||||| |||||||||||||||||||||||||||| ||||| | | ||| || Sbjct 260 CGTTTGAGTTCCTTCTTGATAACAAGAGCTGGAGAGCTTCCGTGCACAGGTTTCAGATGG 319 Query 842 GTAAGACACGGTATGCTCATTA 863 |||| ||||| ||||||||||| Sbjct 320 GTAAAACACGTTATGCTCATTA 341 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59989651275 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5