BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920409 Length=1124 Score E Sequences producing significant alignments: (Bits) Value AT1G15030.1 | Symbols: | Protein of unknown function (DUF789) ... 1685 0.0 > AT1G15030.1 | Symbols: | Protein of unknown function (DUF789) | chr1:5177529-5180049 FORWARD LENGTH=1645 Length=1645 Score = 1685 bits (912), Expect = 0.0 Identities = 1047/1113 (94%), Gaps = 5/1113 (0%) Strand=Plus/Plus Query 14 AAGAGAGATGTTGGGAGCTGGATTTCAGTTGACTCAGCTTCAGAGAGCTCAAAGAGACGT 73 ||||||||||||||||||||||||| | || |||||||||||||||||||||| ||||| Sbjct 360 AAGAGAGATGTTGGGAGCTGGATTTAACTTCACTCAGCTTCAGAGAGCTCAAATTGACGT 419 Query 74 CTTTTATGGCGGCAGATCGATTCACACTAAGGAACGCGAGAACGGCTCTGCATTGCAGAA 133 || ||||||| ||||||||| |||||||||||| || |||||||||||||||||| ||| Sbjct 420 CTCTTATGGCTGCAGATCGAGTCACACTAAGGATCGTGAGAACGGCTCTGCATTGTTGAA 479 Query 134 ACACCATGTTTCTGAGGCATCTTCAAGTAATGTGGAACGGTTTTTGGAGTCGGTGACACC 193 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 480 ACACCATGTTTCTGAGGCATCGTCAAGTAATGTGGAACGGTTTTTGGATTCGGTGACACC 539 Query 194 ATCTGTGCCGGCTCACTGTTTATCTAAGACAACAGTTAGGGAAAGGA-GAGGCAGTGACA 252 |||||| |||||||||| |||||||||||||| ||||||||||| || |||||||||| Sbjct 540 ATCTGTTCCGGCTCACTATTTATCTAAGACAATAGTTAGGGAAA-GAGGAGGCAGTGATG 598 Query 253 TTGAGTCGCAAGTTCCTTACTTTGTTCTTGGAGATGTATGGGAATCGTTTGCAGAGTGGA 312 ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 599 TTGAGTCTCAAGTTCCTTATTTTCTTCTTGGAGATGTATGGGAATCGTTTGCAGAGTGGA 658 Query 313 GTGCTTATGGCATTGGAGTTCCTCTCACTTTGAATAACAATAAAGATCGAGTCTTTCAAT 372 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 659 GTGCTTATGGCATTGGAGTTCCTCTCACTTTGAATAACAATAAAGATCGTGTCTTTCAAT 718 Query 373 ATTATGTGCCTTCGCTTTCCGGTATTCAAGTATATGCTGATGTTGATGCTTTAACTTCAT 432 | || ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 719 ACTACGTGCCCTCGCTTTCTGGTATTCAAGTATACGCTGATGTTGATGCTTTAACTTCAT 778 Query 433 CTCTTCAAGCAAGGCGGCAAGGGGAGGAGAGCGAAAGCGATTTCAGGGATTCAAGTAGTG 492 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 779 CTCTTCAAGCAAGGCGGCAAGGTGAGGAGAGCGAAAGCGATTTTAGGGATTCAAGTAGTG 838 Query 493 AAGGAAGCAGTAGTGAATCCGAAAGAGGACTTTCTTATCCAAAAGAGCAGATCTCTGCTA 552 ||||||||||||||||||| ||||||||||| | |||| |||||||||||||||| |||| Sbjct 839 AAGGAAGCAGTAGTGAATCTGAAAGAGGACTCTGTTATTCAAAAGAGCAGATCTCCGCTA 898 Query 553 GAATGGACAAACTCTCGTTAAGAAAGGAGCATCACGAAGATTCGTCTAGTGATGATGGCG 612 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 899 GAATGGACAAACTCTCCTTAAGAAAGGAGCATCAAGAAGATTCGTCTAGTGATGATGGCG 958 Query 613 AGCCTTTAACCTCTCATGGTCGTTTGATATTTGAGTATCTTGAACGTGATCTTCCTTACA 672 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 959 AGCCTTTAAGCTCTCAAGGTCGTTTGATATTTGAGTATCTTGAACGTGATCTTCCTTACG 1018 Query 673 TCCGTGAACCCTTTGCCGACAAGATGTCTGACCTTGCCTCTAGATTTTCCGAGCTGAATA 732 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 1019 TCCGTGAACCCTTTGCCGACAAGATGTCTGACCTTGCCTCTAGATTTCCCGAGCTGAAGA 1078 Query 733 CGCTAAGAAGCTGTGATTTACTACCTTCAAGCTGGTTTTCTGTGGCATGGTACCCAATAT 792 ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | Sbjct 1079 CGCTAAGAAGCTGTGATTTGCTTCCTTCAAGCTGGTTTTCTGTGGCATGGTACCCAATTT 1138 Query 793 ACAAGATACCCACAGGACCGACCCTCAAGGATCTGGATGCTTGTTTCTTGACTTATCATT 852 |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1139 ACAAAATACCCACAGGACCGACACTCAAGGATCTGGATGCTTGTTTCTTGACCTATCATT 1198 Query 853 CCCTTCACACACCCTTTCAATGTCCAGGAGTTACAACAGGGTCTATGCATGTGGTGCAGC 912 |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 1199 CCCTTCACACACCCTTTCAAGGTCCAGGCGTTACAACAGGGTCTATGCATGTGGTGCAGC 1258 Query 913 CAAGGGAAAGTGTTGAGAAGATGGAACTGCCTGCCTTTGGTCTCGCCTCATACAAGTTGA 972 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1259 CAAGGGAAAGTGTTGAGAAGATGGAACTGCCTGTCTTTGGTCTCGCCTCATACAAGTTGA 1318 Query 973 GAGGTTCTGTATGGACAGGCTTCAGG-GGCTCTGGACACCAGGTCGTGAACTCCCTCTTC 1031 ||||||||||||||||| |||| || ||||| || |||||| ||| |||||| |||||| Sbjct 1319 GAGGTTCTGTATGGACAAGCTTT-GGTGGCTCGGGCCACCAGCTCGCGAACTCTCTCTTC 1377 Query 1032 CAAGCCGCAGACAATTGGCTGAGGTTGCGTCAAGTCAACCATCCAGATTTCATCTTCTTC 1091 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1378 CAAGCCGCAGATAATTGGCTGAGGTTGCGTCAAGTCAACCATCCTGATTTCATCTTCTTC 1437 Query 1092 TGCCGCCGGTAATGATGTGATTATACTATGATG 1124 |||||||||||||||| ||||||||||||||| Sbjct 1438 TGCCGCCGGTAATGATA-GATTATACTATGATG 1469 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55120198410 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5