BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920528 Length=1259 Score E Sequences producing significant alignments: (Bits) Value AT1G16250.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1938 0.0 > AT1G16250.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:5556989-5559520 FORWARD LENGTH=1824 Length=1824 Score = 1938 bits (1049), Expect = 0.0 Identities = 1168/1224 (95%), Gaps = 13/1224 (1%) Strand=Plus/Plus Query 32 CAAGCTCGAGAAGGGGATC-GCACGATACATTTTTACAA--TCTCGCG-AC--TTCGATT 85 |||| |||||||||||||| | | |||||| ||||||| ||||| | || |||| || Sbjct 168 CAAGTTCGAGAAGGGGATCAG-AAGATACA--TTTACAATCTCTCGAGTACGATTCGGTT 224 Query 86 CATGGAATCAATAGAGCAGTCTATAATCCCAGGTTTGCCTGATGATTTGGCTTTGAGATG 145 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 225 CATGGAATCAATCGAGCAGTCTATAATCCCAGGTTTGCCTGATGATTTGGCTTTGAGATG 284 Query 146 CATAGCGAAGCTTTCTCATGGCTATCATGGAGTGCTCGAGTGTGTTTCCAGAGGCTGGAG 205 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 285 CATAGCGAAGCTTTCTCATGGGTATCATGGAGTGCTCGAATGTGTTTCCAGAGGCTGGAG 344 Query 206 AGATTTAGTTCGTAGCGTTGATTACTCTTGCTATAAAGCTAGAAATGGATGGTCAGGGAG 265 ||||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||| Sbjct 345 AGATTTAGTTCGTGGTGCTGATTACTCGTGCTATAAAGCTAGAAATGGATGGTCAGGGAG 404 Query 266 CTGGTTGTTTGTCTTGACAGAACGTTCTAAGAACCAATGGGTTGCTTATGATCCTCAAGC 325 |||||||||||| ||||| |||||||||||||| || |||||||||||||||||| |||| Sbjct 405 CTGGTTGTTTGTGTTGACGGAACGTTCTAAGAATCAGTGGGTTGCTTATGATCCTGAAGC 464 Query 326 TGATCGATGGCATCCTTTGCCTAGAACTAGGGCTGTTCAAGATGGTTGGCATCATTCTGG 385 ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 465 TGATCGATGGCATCCATTGCCTAGAACTAGAGCTGTTCAAGATGGTTGGCATCATTCTGG 524 Query 386 TTTTGCGTGTGTTTGCGTTTCGAATTGTCTTCTTGTGATTGGGGGTTGTTATGCGCCTTC 445 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 525 TTTTGCGTGTGTTTGTGTTTCCAATTGTCTTCTTGTGATTGGGGGTTGTTATGCGCCTTC 584 Query 446 TGTGTCATCGTTTCCTCATCAGAAGCCTGTTGTCACTAAAGATGTCATGCGGTTTGATCC 505 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 585 GGTGTCATCGTTTCCTCATCAGAAGCCTGTTGTCACTAAAGATGTCATGCGGTTTGATCC 644 Query 506 GTTTAAGAAAGAATGGAAAATGGTTGCTAGTATGCGAACACCACGGACTCACTTTGCTTG 565 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 645 GTTTAAGAAACAATGGAAAATGGTTGCTAGTATGCGAACACCACGGACTCACTTTGCTTG 704 Query 566 CACTGCTGTCTCTGGCAAGGTTTATGTTGCTGGAGGTCGCAATTTAACCCATTCCAGGGG 625 ||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 705 TACTTCTGTCTCTGGCAAGGTTTATGTTGCTGGAGGTCGTAATTTAACTCATTCCAGGGG 764 Query 626 AATTCCC-TCTGCTGAGGTTTATGATCCTGTGGCTGATAGATGGGAGGAATTACCAGCAA 684 || |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 765 AA-TCCCATCTGCTGAGGTTTATGATCCTGTCGCTGATAGGTGGGAGGAATTACCAGCAA 823 Query 685 TGCCTAGACCACAGATGGACTGCTCGGGGTTATCGTACAGAGGTTGCTTTCATGTTCTGA 744 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | | Sbjct 824 TGCCTAGACCACAGATGGACTGCTCGGGGTTATCGTACAGAGGCTGCTTTCATGTTTTAA 883 Query 745 GTGACCAGGTGGGATTTGCAGAGCAAAATTCATCTGAAGTTTTTAATCCACGAGACATGA 804 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 884 GTGACCAGGTGGGATTTGCAGAGCAAAATTCATCTGAAGTTTTTAATCCACGAGACATGA 943 Query 805 CTTGGTCCACTGTGGAGGATGTCTGGCCTTTCTCTAGAGCCATGCAGTTTGCTGTTCAGG 864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 944 CTTGGTCCACTGTGGAGGATGTCTGGCCTTTCTCTAGAGCCATGCAGTTTGCTGTTCAGG 1003 Query 865 TGATGAAAAATGATCGAGTGTACACTATTGTAGATTGGGGAGAAAGCTTGATCAAGACTA 924 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1004 TGATGAAAAATGATCGGGTGTATACTATTGTAGATTGGGGAGAAAGCTTGATCAAGACTA 1063 Query 925 GGGATACAGATGAAGGGGAATGGTACAATGTTGGTTCAGTTCCTTCTGTTGTTCTTCCTA 984 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1064 GGGATACAGATGAAGGGGAATGGTACAATGTTGGTTCAGTTCCTTCTGTTGTTCTTCCTA 1123 Query 985 ATCATCCGAGAGAGTTAGAGGCCTTTGGTTATGGGTTTGCAGCTCTAAGGGATGAGCTCT 1044 ||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| |||| Sbjct 1124 ATCATCCGAGAGAGTTAGAAGCCTTCGGTTATGGGTTTGCAGCTCTAAGGAATGAACTCT 1183 Query 1045 ATGTTATAGGAGGTAAGGTCCTTAAATGGGAAGAATCAGGGGCAGGGAGATTTGACATTG 1104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1184 ATGTTATAGGAGGTAAGGTCCTTAAATGGGAAGAATCAGGGGCAGGGAGATTTGACATTG 1243 Query 1105 TGAGATTGCCCGTTGTGAGGGTATGTAACCCTTTGGATAGGCCTCTGAATTGGAGAGAGA 1164 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1244 TGAGATTGCCTGTTGTGAGGGTATGTAACCCTTTGGATAGACCTCTGAATTGGAGAGAGA 1303 Query 1165 CCAAACCGATGTGCATTCCAGCCGGTGGGTCCATCATTGGTTGTGTATCCTTGGAAGAAT 1224 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1304 CCAAACCAATGTGCATTCCAGCCGGTGGGTCGATCATTGGTTGTGTATCCTTGGAAGAAT 1363 Query 1225 CTTCTCCGCTTTAAACCAAG-GTG 1247 ||||||| | |||| ||||| ||| Sbjct 1364 CTTCTCCCCCTTAA-CCAAGTGTG 1386 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61897271985 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5