BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg920736

Length=564
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G18100.1 | Symbols: E12A11, MFT | PEBP (phosphatidylethanola...   894    0.0  


> AT1G18100.1 | Symbols: E12A11, MFT | PEBP (phosphatidylethanolamine-binding 
protein) family protein | chr1:6227217-6230188 
REVERSE LENGTH=1432
Length=1432

 Score =  894 bits (484),  Expect = 0.0
 Identities = 537/563 (95%), Gaps = 2/563 (0%)
 Strand=Plus/Plus

Query  1    ATATCTCCCTCTCTGTTAATCGATGGCAGCTTCTGTTGATCCTTTGGTGGTCGGAAGAGT  60
            ||||||||||| | | | ||||||||| ||||||||||||||||||||||||||||||||
Sbjct  57   ATATCTCCCTCCCCGCTGATCGATGGCGGCTTCTGTTGATCCTTTGGTGGTCGGAAGAGT  116

Query  61   GATCGGAGATGTGTTGGACATGTTCATCCCAACCGCCAATATGTCTGTCTACTTCGGCCC  120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  117  GATCGGAGATGTGTTGGACATGTTCATCCCAACCGCCAATATGTCTGTCTACTTTGGCCC  176

Query  121  CAAACACATCACCAACGGCTGCGAGATTAAACCCTCCACCGCAGTCAATCCTCCAAAAGT  180
            |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  177  CAAACACATCACTAACGGCTGCGAGATCAAACCCTCCACCGCAGTCAATCCTCCAAAAGT  236

Query  181  CAACATCTCGGGCCATTCCGATGAGCTTTACACTCTCGTGATGACTGACCCGGACGCACC  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  237  CAACATCTCGGGCCATTCCGATGAGCTTTACACTCTCGTGATGACTGACCCGGACGCACC  296

Query  241  TAGCCCAAGCGAGCCGAACATGAGAGAATGGGTCCATTGGATTGTCGTGGATATTCCCGG  300
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct  297  TAGCCCAAGCGAGCCGAACATGAGAGAATGGGTCCACTGGATTGTCGTGGATATTCCCGG  356

Query  301  AGGCACCAACCCCTCGAGAGGAAAGGAGATACTTCCATACATGGAACCAAGACCACCAGT  360
            |||||| || ||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct  357  AGGCACAAATCCCTCAAGAGGAAAAGAGATACTTCCATACATGGAACCAAGGCCACCAGT  416

Query  361  GGGGATCCACCGTTACATTTTGGTACTTTTCCGGCAAAACTCACCGGTGGGTCTGATGGT  420
            |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct  417  GGGGATTCACCGTTACATATTGGTACTTTTCCGGCAAAACTCACCGGTGGGTCTGATGGT  476

Query  421  GCAGCAGCCGCCATCACGAGCCAATTTCAGCACCCGCATGTTCGCTGGACATTTCGATCT  480
            ||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct  477  GCAGCAGCCTCCATCACGAGCCAATTTCAGCACACGAATGTTCGCTGGACATTTCGATCT  536

Query  481  TGGTCTACCTGTGGCCACGGTCTACTTCAACGCCCAAAAGGAGCCTGCTTCACGCAGACG  540
            |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||
Sbjct  537  TGGTCTACCTGTGGCCACTGTCTATTTCAACGCCCAAAAGGAACCTGCTTCACGCAGACG  596

Query  541  CTAGTACAAGAAAC-AAACTAAT  562
            ||||||||| |||  |||| |||
Sbjct  597  CTAGTACAA-AAAGTAAACAAAT  618



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 27076205233


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5