BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920744 Length=958 Score E Sequences producing significant alignments: (Bits) Value AT1G18180.1 | Symbols: | Protein of unknown function (DUF1295)... 1570 0.0 > AT1G18180.1 | Symbols: | Protein of unknown function (DUF1295) | chr1:6255830-6257900 FORWARD LENGTH=1154 Length=1154 Score = 1570 bits (850), Expect = 0.0 Identities = 919/952 (97%), Gaps = 5/952 (1%) Strand=Plus/Plus Query 6 TGATT-GCTGTAGAGAATGGTAAAAGTAATCGATTCCCATTACCTTGCCATCACCGCCAT 64 ||||| || | |||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 58 TGATTGGCCGGAGAGAATGGTGAAAGTAATCGATTCCCATTACCTAGCCATCACCGCCAT 117 Query 65 TGTCACCGTGGGTTATCAATTCATATTCTTCGTAATCACAGCTCTTTTCAAATTTGATCA 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 TGTCACCGTGGGTTATCAATTCATATTCTTCGTAATCACAGCTCTTTTCAAATTTGATCA 177 Query 125 AGTTACGGACTTTGCCGGAAGTACTAATTTCGTGATACTTGCTGTATTGACTCTGGTTCT 184 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 178 AGTTACTGACTTTGCCGGAAGTACAAATTTCGTGATACTTGCTGTATTGACTCTGCTTCT 237 Query 185 CAAAGGGACATGGCATTATCGTCAGATAGTCTTGACTGTGCTAGTAGTCGTATGGGGACT 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 CAAAGGGACATGGCATTATCGTCAGATAGTCTTGACTGTGCTAGTAGTCGTATGGGGACT 297 Query 245 TCGTCTCGGACTGTTCCTCCTTATGAGGATCTTGCAATGGGGTGAAGATCGACGCTTTGA 304 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 TCGTCTGGGACTGTTCCTCCTTATGAGGATCTTGCAATGGGGTGAAGATCGACGCTTTGA 357 Query 305 TGAAATGCGTGGAAATATCGGGAAACTAGTAGTCTTTTGGATTTTTCAGGCCGTGTGGGT 364 ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 358 TGACATGCGTGAAAATATTGGGAAACTAGTAGTCTTTTGGATTTTTCAGGCCGTGTGGGT 417 Query 365 TTGGACTGTTAGTTTACCTGTTACCTTTGTTAATGCAAGCAACGGTGGAAGATTGTTTCA 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 TTGGACTGTTAGTTTACCTGTTACCTTTGTTAATGCAAGCAACGGTGGAAGATTGTTTCA 477 Query 425 GCCCGCAGATGTTATAGGTTGGACAATGTGGGCTGCAGGGTTCTTGATTGAAGCTACAGC 484 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 478 GCCCGCAGATGTTATCGGTTGGACAATGTGGGTTGCAGGGTTCTTGATTGAAGCTACAGC 537 Query 485 TGATCAACAAAAGCTTTCATTCAAGAAGTGTCCAGAAAACAAAGGAAGATGGTGCGATGT 544 |||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct 538 TGATCAACAAAAGCTTTCGTTCAAGAAGTGTCCAGAAAACAAAGGAAAATGGTGTGATGT 597 Query 545 TGGTGTATGGAAGTATTCACGCCATCCAAACTACTTTGGTGAGATGTTACTCTGGTGGGG 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 TGGTGTATGGAAGTATTCACGCCATCCAAACTACTTTGGTGAGATGTTACTCTGGTGGGG 657 Query 605 CATATATGTGGCTTCATTGCCTGTGCTTAAAGGTGTCGAGTACCTTGTCATAATTGGACC 664 | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 658 CTTATATGTGGCTTCATTGCCTGTGCTTAAAGGTCTCGAGTACCTTGTCATAATTGGACC 717 Query 665 AGTCTTTCTCACTTTGCTACTTTTCTTCGTTAGCGGCATACCATTACTCGAGGAATCTGC 724 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 718 AGTCTTTCTCACTTTGCTACTTCTCTTCGTTAGCGGCATACCATTACTCGAGGAATCTGC 777 Query 725 GGACAAAAAATATGGTAACTTGGGAGCTTATCGACACTACAAGAAGACAACTAGTCCTCT 784 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 GGACAAAAAGTATGGTAACTTGGGAGCTTATCGACACTACAAGAAGACAACTAGTCCTCT 837 Query 785 GATTCTGTTACCACGAGGAGTGTATGGGTACTTGCCAAAATGGTGCAAAACAGTCTTTCT 844 |||||| ||||| |||||||||||||||||||| |||| |||||||||| |||||||||| Sbjct 838 GATTCTCTTACCGCGAGGAGTGTATGGGTACTTACCAATATGGTGCAAATCAGTCTTTCT 897 Query 845 TTTTGAGTTTCCATTGTACAGCCGTAATCTTCCTCAAGAGACTACAGCCTGGGATAGACG 904 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 898 CTTTGAGTTTCCATTGTACAGCCGTAATCTTCCTCAAGAGACTACAGCTTGGGATAGACG 957 Query 905 AAACTCGAAGAAGAGCCAGAGAAGTATTGACTGAGGGAGCGAGAGAAAGAGA 956 |||||||||||||||||||||||| |||||||||| || ||||||||||| Sbjct 958 AAACTCGAAGAAGAGCCAGAGAAGCATTGACTGAG--AG--AGAGAAAGAGA 1005 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46868459151 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5