BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920808 Length=664 Score E Sequences producing significant alignments: (Bits) Value AT1G18720.1 | Symbols: | Protein of unknown function (DUF962) ... 1048 0.0 > AT1G18720.1 | Symbols: | Protein of unknown function (DUF962) | chr1:6457821-6459751 REVERSE LENGTH=913 Length=913 Score = 1048 bits (567), Expect = 0.0 Identities = 636/669 (95%), Gaps = 6/669 (1%) Strand=Plus/Plus Query 1 CTCTTCCTCAA--AATTCATTCA-CCATGAGTCGCATGATGGGATTGTTCGATCTCGAGA 57 ||||||||||| |||| || | ||||||||||||| |||||||||||||||||||||| Sbjct 69 CTCTTCCTCAACGAATT-TTTTATCCATGAGTCGCATAATGGGATTGTTCGATCTCGAGA 127 Query 58 AACACTTCGCCTTCTACGGTGCTTACCACAGCAATCCGATCAACATTCTAATCCACATCA 117 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 128 AACACTTCGCCTTCTACGGTGCTTACCATAGCAATCCGATCAACATTCTAATCCACATCA 187 Query 118 TCTTCGTTTGGCCAATCGTCTTCTCAGCTTTACTTCTCCTCCACTCATCGACCCCAATTT 177 ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| Sbjct 188 TCTTCGTTTGGCCAATCTTCTTCTCAGTTTTACTTCTCCTCCACTCGTCGACCCCAATTT 247 Query 178 TCGATCCTTCTCAATTAGGGTTTTCTCAATCGTTGACCCTCGACGGCGTTCTGCGATTTA 237 |||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 248 TCGACCCCTCTCAATTAGGGTTTTCTCAATCGTTGACCCTCGACGGCGTTTTGCGATTTA 307 Query 238 ACGTTGGGTTTATATTCACCTTGATTTATGCTCTGTTCTACATTGGTTTGGATAAAAAAT 297 ||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||| Sbjct 308 ACGTTGGGTTTATATTCGCCTTGATTTATGCTCTGTTCTATATCGGTTTGGATAAGAAAT 367 Query 298 CTGGATTTGTAGCTGCTCTTATGTGTTTCTCTTGCTGGGTTGGTTCCAGTTTTCTCGCTG 357 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 368 CTGGATTTGTAGCTGCTCTTATGTGTTTCTCTTGCTGGGTTGGTTCCAGTTTTCTTGCTG 427 Query 358 CTCGATTAGGATCTTCTCTTACCTTTAAGGTTGGGTTAGCATCTCAGCTGTTATGTTGGA 417 |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 428 TTCGACTAGGATCTTCTCTTGCCTTAAAGGTTGGGTTAGCATCTCAGCTGTTATGTTGGA 487 Query 418 CCGGGCAGTTCGTTGGCCATGGAGTGTTCGAGAAACGAGCACCTGCGCTATTAGACAATT 477 ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| Sbjct 488 CCGGGCAGTTCGTTGGCCATGGAGTATTCGAGAAACGGGCACCTGCGCTGTTAGACAATT 547 Query 478 TAGTCCAAGCTTTTCTCATGGCTCCTTTCTTCGTGTTGCTCGAGGTTCTTCAGTCAGTTT 537 || ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 548 TACTCCAAGCTTTTCTCATGGCTCCTTTCTTCGTGTTGCTCGAGGTTCTTCAATCGGTTT 607 Query 538 TCGGGTATGAACCATATCCCGGTTTTCAAGCGCGTGTGAATGCCAAGGTAGAAAGTGACA 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 608 TCGGGTATGAACCATATCCCGGTTTTCAAGCGCGTGTGAATGCCAAGGTAGAAAGTGACA 667 Query 598 TCAAGGAATATAGGGCAAATAAGCAGAAGAAGAATAAGATCACATAAGTTTGGATTATAT 657 ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct 668 TCAAGGAATATAGGGCAAAGAAGCAGAAGAAGAATAAGATCACATAAGCTTGGATTATAT 727 Query 658 A-A-CTGAA 664 | | ||||| Sbjct 728 ATAACTGAA 736 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32099619933 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5