BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921070 Length=840 Score E Sequences producing significant alignments: (Bits) Value AT1G21000.1 | Symbols: | PLATZ transcription factor family pro... 1408 0.0 > AT1G21000.1 | Symbols: | PLATZ transcription factor family protein | chr1:7337728-7339452 FORWARD LENGTH=1296 Length=1296 Score = 1408 bits (762), Expect = 0.0 Identities = 814/840 (97%), Gaps = 0/840 (0%) Strand=Plus/Plus Query 1 GGAGCTCGCAAATCTGGCTATCGAAAACCACAATCACAAACTCAACTTCGGGGCCTTCAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 113 GGAGCTCGCAAATCTGGCTATCGAAAACCACAATCACAAACTCAACTTCGGGGCCTTCAA 172 Query 61 GGCCAATCACAAGAAAGTCATGGGACCAATGATAAGAACAGAGGAAGAAGGAGACTATAC 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 173 GGCCAATCACAAGAAAGTCATGGGACCAATGATAAGAACAGAGGAAGAAGAAGACTATAC 232 Query 121 GAGTCCACCGTGGCTAATGCCAATGCTACGAGGGAGTTACTTCGTCCCTTGTTCGATCCA 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 233 AAGTCCACCGTGGCTAATGCCAATGCTACGAGGGAGTTACTTCGTCCCTTGTTCCATCCA 292 Query 181 CGTCGATTCAAACAAAAACGAATGCAATTTGTTCTGTCTTGATTGTGCTGGAAATGCCTT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 293 TGTCGATTCAAACAAAAACGAATGCAATTTGTTCTGTCTTGATTGTGCTGGAAATGCCTT 352 Query 241 TTGCTCTTACTGTTTAGTCAAACATAAAGACCATCGTGTTGTTCAGATACGAAGATCTTC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 353 TTGCTCTTACTGTTTAGTCAAACATAAAGACCATCGTGTTGTTCAGATACGAAGATCTTC 412 Query 301 GTACCATAACGTGGTGAGAGTGAATGAGATACAGAAGTTCATAGACATCTCTTGCGTTCA 360 |||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 413 GTACCATAACGTTGTGAGAGTGAATGAGATACAGAAGTTCATAGACATCGCTTGTGTTCA 472 Query 361 GACATATATCATCAACAGCGCAAAGATCGTGTTCCTCAATGAAAGACCTCAGCCTAGAAT 420 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 473 GACATATATTATCAACAGCGCAAAGATCGTGTTCCTCAATGAAAGACCTCAGCCTAGAAT 532 Query 421 CGGCAAAGGTGTTACAAACACTTGTGAAATCTGTTGCAGAAGCCTCCTTGATTCTTTCAG 480 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 533 CGGTAAAGGTGTTACAAACACTTGTGAAATCTGTTGCAGAAGTCTCCTTGATTCTTTCAG 592 Query 481 GTTCTGCTCTCTCGGCTGCAAGCTTGGAGGAATGAAGAGAGGAGATTCATCTTTAACCTT 540 ||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| Sbjct 593 GTTCTGCTCTCTCGGCTGCAAGCTTGGAGGAATGAGGAGAGGAGATTTATCTCTAACCTT 652 Query 541 CTCTTTGAAAGGGAAGCATGGTAGAGAGTACCAAGGTGGGTCGGAATCAGATGAAGCCAC 600 |||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| || Sbjct 653 CTCTTTGAAAGGAAAGCATGGGAGAGAGTACCTTGGTGGGTCGGAATCAGATGAAGCTAC 712 Query 601 TACACCAACTAAGATGCGTAAGACCAATGCTTTCAACCGTCTGATGAGTGGTCTCTCGAT 660 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 713 TACACCGACTAAGATGCGTAAGACCAATGCTTTCAACCGTCTGATGAGTGGTCTCTCGAT 772 Query 661 CTCAACCGTTAGATTCGATGACTACGGTCCTGGTGGTGATCAAAGGTCTTCAAGCTCTGG 720 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 773 CTCAACCGTTAGATTCGATGACTACGGTCCCAATGGTGATCAAAGGTCTTCAAGCTCTGG 832 Query 721 TGATGAAGGTGGTTTTAGTTTCTCTCCGGGAACATCTCCGATCTACAATCACCGGAATTC 780 |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 833 TGATGAAGGTGGTTTTAGTTTCTCTCCGGGAACACCTCCGATCTATAATCACCGGAATTC 892 Query 781 AAGCAGACGAAAGGGTGTCCCTCACCGTGCTCCGTTTTAAGAAAAGATAATTACTGAATT 840 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 893 AAGCAGACGAAAGGGTGTCCCTCACCGTGCTCCGTTCTAAGAAAAGATAATTACTAAATT 952 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40940829805 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5