BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921072 Length=776 Score E Sequences producing significant alignments: (Bits) Value AT1G21050.1 | Symbols: | Protein of unknown function, DUF617 |... 1118 0.0 > AT1G21050.1 | Symbols: | Protein of unknown function, DUF617 | chr1:7366775-7367678 FORWARD LENGTH=904 Length=904 Score = 1118 bits (605), Expect = 0.0 Identities = 712/763 (93%), Gaps = 9/763 (1%) Strand=Plus/Plus Query 13 aaaaaaaTCATGAGGACAATGGTTGATTTAGGAAAGCAAAGAGATCATCACTATCAACAC 72 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 76 AAACAAATCATGAGGACAATGGTTGATTTAGGAAAGCAAAGAGATCATAACTATCACCAC 135 Query 73 ATGCAATTCATAACCACTCCGACCACCGTCGATTGTTCTCGCGAATTCCGTCACCGACGA 132 |||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct 136 ATGCAAATCATAACCACTCCTACCTCCGTGGATTGTTCTCGCGAATTCCGTCACCGACGA 195 Query 133 ACACTCCGATCACTCATCGAATGCATGATCCCATACTGTTGCACTTACCAACAACAGCCT 192 ||||| || |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 196 ACACTTCGTTCACTCATCGAATGCATGATTCCATACTGTTGCACTTACCAACAACAACCA 255 Query 193 TACCAAAACGACACTGTTTCAGtctctt-c-c-tc-t--tcctcttcctcctcagaccac 246 |||||||||||||| |||||||||||| | | || | || ||||| |||||||||||| Sbjct 256 TACCAAAACGACACCCTTTCAGTCTCTTCCACTTCATCCTCGTCTTCATCCTCAGACCAC 315 Query 247 tcttcctcctcctccCAGAGTAACAGCATCGTAAGTGGAACTTTCTTCGGCCACCGTCGT 306 || | |||||||||||||||| ||| | ||||||||||||||||||||| ||||||||| Sbjct 316 TC-T--TCCTCCTCCCAGAGTAGCAGTACCGTAAGTGGAACTTTCTTCGGACACCGTCGT 372 Query 307 GGCAGAGTCAGCTTCTGCCTTCAAGACGCCGCCGTGGGATCTTCACCGCTTCTCCTCCTT 366 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 373 GGCCGAGTCAGCTTCTGCCTTCAAGACGCCGCCGTGGGATCTTCACCGCTGCTCCTCCTC 432 Query 367 GAGCTAGCTGTTCCCACGGCTGCGTTAGCCAAGGAAATGGACGAGGCAGGTGTTCTACGC 426 |||||||||||||| ||||| || |||||||| ||||||||||||| ||||||||||||| Sbjct 433 GAGCTAGCTGTTCCTACGGCAGCTTTAGCCAAAGAAATGGACGAGGAAGGTGTTCTACGC 492 Query 427 ATAGCCCTAGAGTGTGACCGTCGTAGAAGCAGCAACAGTCGTTCGTCGTCGATCTTTGAT 486 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 493 ATAGCCCTCGAGTGTGACCGTCGTAGAAGCAGCAATAGTCGTTCGTCTTCGATCTTTGAT 552 Query 487 GTTCCTGTGTGGTCGATGTATTGCAACGGAAGGAAAATGGGATTTGCCGTGAGGAGAAAG 546 |||||||| ||||| |||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 553 GTTCCTGTTTGGTCTATGTTTTGTAACGGAAGGAAAATGGGATTTGCCGTGAGGAGAAAG 612 Query 547 GTGACGGAGAACGACGCCGTTTTCTTAAGGATGATGCAGTCTGTGTCAGTCGGAGCCGGA 606 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 613 GTGACGGAGAACGACGCCGTTTTCTTGAGGATGATGCAGTCTGTGTCAGTCGGAGCCGGA 672 Query 607 GTTGTGCCGTCGGAAGAGGAGGAGCAGACGTTGTATTTGAGGGCTAGGTTTGAGCGAGTT 666 || |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 673 GTGGTGCCGTCGGAAGAGGAGGATCAGATGTTGTATTTGAGGGCTAGGTTTGAGCGAGTT 732 Query 667 ACTGGGTCGAGTGACTCGGAATCGTTTCATATGATGAATCCGGGTGGTAGTTATGGACAA 726 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 733 ACTGGTTCGAGTGACTCGGAATCGTTTCACATGATGAATCCGGGTGGTAGTTATGGACAA 792 Query 727 GAGCTTAGTATATTTCTTTTGAGATCGTGAAATTAAGTACGGT 769 ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 793 GAGCTTAGTATATTTCTTTTGCGATCGTGAAATTAAGTACGGT 835 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37725844397 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5