BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921118 Length=784 Score E Sequences producing significant alignments: (Bits) Value AT1G21460.1 | Symbols: SWEET1, AtSWEET1 | Nodulin MtN3 family p... 1247 0.0 > AT1G21460.1 | Symbols: SWEET1, AtSWEET1 | Nodulin MtN3 family protein | chr1:7511850-7513361 REVERSE LENGTH=1004 Length=1004 Score = 1247 bits (675), Expect = 0.0 Identities = 749/785 (95%), Gaps = 3/785 (0%) Strand=Plus/Plus Query 3 CACCTTTGAGATCAAAAGATGAACATCGCTCACACCATCTTCGGCGTTTTCGGAAATGCA 62 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 63 CACCTTTGAGATCAAAAGATGAACATCGCTCACACTATCTTCGGCGTTTTCGGAAATGCA 122 Query 63 ACTGCTCTGTTTCTTTTCTTGGCTCCTTCGATAACATTCAAGAGAATCATCAAGAACAAA 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 ACTGCTCTGTTTCTTTTCTTGGCTCCTTCGATAACATTCAAGAGAATCATCAAGAACAAA 182 Query 123 TCCACCGAACAATTCTCTGGTATCCCTTACCCAATGACTCTCCTCAACTGTCTCCTCTCC 182 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 183 TCCACTGAACAATTCTCTGGTATCCCTTATCCAATGACTCTCCTCAACTGTCTCCTCTCT 242 Query 183 GCTTGGTATGGACTTCCCTTTGTGTCAAAAGACAACACACTTGTGAGCACAATCAATGGA 242 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 GCTTGGTATGGACTTCCCTTTGTGTCAAAAGACAACACACTTGTGAGCACAATCAATGGC 302 Query 243 ACAGGAGCAGTAATCGAAACAGTCTACGTGTTGATCTTCCTCTTCTACGCACCAAAGAAA 302 ||||||||||| |||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 303 ACAGGAGCAGTGATCGAAACAGTCTACGTGTTAATCTTTCTTTTCTACGCACCAAAGAAG 362 Query 303 GAGAAAGTTAAGATCTTTGGTATCTTCTCTTGCGTTTTGGCCGTATTCGCAACAGTAGCT 362 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 363 GAGAAAATTAAGATCTTTGGTATCTTCTCTTGCGTTTTGGCTGTATTCGCAACAGTAGCT 422 Query 363 CTTGTCTCTCTCTTTGCTCTCCATGGAAATGGTAGAAAACTCTTCTGTGGTCTCGCAGCT 422 || ||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||| Sbjct 423 CTCGTCTCTCTCTTTGCTCTTCAAGGAAACGGTAGAAAACTCTTTTGTGGTCTCGCAGCT 482 Query 423 ACTGTTTTCTCCATCATCATGTACGCTTCTCCACTCTCCATCATGAGATTGGTGATAAAG 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 483 ACTGTTTTCTCCATCATCATGTACGCTTCTCCACTCTCCATCATGAGATTGGTGGTAAAG 542 Query 483 ACGAAGAGTGTTGAGTTTATGCCATTCTTTTTGTCTCTCTTTGTCTTCCTCTGTGGTACT 542 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 543 ACGAAGAGTGTAGAGTTTATGCCATTCTTTTTGTCACTCTTTGTCTTCCTCTGTGGTACT 602 Query 543 TCGTGGTTCGTCTATGGTCTTATCGGTCGTGACCCTTTTGTTGCAATACCAAATGGGTTT 602 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 603 TCGTGGTTCGTCTATGGTCTAATCGGTCGTGACCCTTTTGTTGCAATCCCAAATGGGTTT 662 Query 603 GGATGTGCATTAGGGACACTGCAATTGATACTATACTTCATCTACTGTGGAAACAAAGGC 662 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 663 GGATGTGCATTAGGGACACTGCAATTGATACTATACTTCATCTACTGTGGAAACAAAGGA 722 Query 663 CAGAAATCTGCGGATGCTGAGAAAGATGAGAAGTCGGTGGAGATGAAAGGTGATGAGAAG 722 |||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||| Sbjct 723 GAGAAATCTGCAGATGCTCAGAAAGATGAGAAGTCAGTGGAGATGAAAGATGATGAGAAG 782 Query 723 AAGCACCATGTGGTTAATGGGAAGCAAGACCTTCAAGTTTGAA-G--CTTTTGAAGATGA 779 ||||| ||||||||||||| ||||||||||||||||||| || | ||||||| ||||| Sbjct 783 AAGCAGAATGTGGTTAATGGAAAGCAAGACCTTCAAGTTTAAAAGAGCTTTTGAGGATGA 842 Query 780 TTTGG 784 ||||| Sbjct 843 TTTGG 847 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38127717573 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5