BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg921129
Length=1694
Score E
Sequences producing significant alignments: (Bits) Value
AT1G21540.1 | Symbols: | AMP-dependent synthetase and ligase f... 2625 0.0
AT1G21530.2 | Symbols: | AMP-dependent synthetase and ligase f... 1749 0.0
> AT1G21540.1 | Symbols: | AMP-dependent synthetase and ligase
family protein | chr1:7548614-7550565 REVERSE LENGTH=1841
Length=1841
Score = 2625 bits (1421), Expect = 0.0
Identities = 1605/1696 (95%), Gaps = 4/1696 (0%)
Strand=Plus/Plus
Query 1 ACATAAACAAGAATCAAAGTATGGAACTCTTACTTCCACACCCTTCGAACTCAACACCTC 60
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 25 ACATTAACAAAAATCAAAGTATGGAACTCTTACTTCCACACCCTTCGAACTCAACACCTC 84
Query 61 TCACCGTCCTCGGCTTCTTGGATCGAGCCGCCTCCGTCTATGGCGACTGTCCGTCCATCC 120
||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||
Sbjct 85 TCACCGTCCTCGGCTTCTTAGACCGAGCCGCCTCTGTCTACGGCGACTGTCCGTCCATCC 144
Query 121 TCCACGCCACTAACACCGTCCACACTTGGTCCGAAACCCACAACCGCTGTCTTCGAATCG 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 TCCACACCACTAACACCGTCCACACTTGGTCCGAAACCCACAACCGCTGTCTTCGAATCG 204
Query 181 CCTCGGCTCTCACTTCATCCTCTCTCGGCATAAACCAAGGCCAAGTCATCTCCGTCGTAG 240
|||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 205 CCTCGGCTCTCACTTCTTCCTCTCTCGGCATAAACCGAGGCCAAGTTGTCTCCGTCGTAG 264
Query 241 GCCCCAACGTCCCGTCTGTTTACGAACTTCAGTTTGCTGTCCCAATGTCCGGAGCCATCT 300
| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct 265 GTCCCAACGTCCCGTCCGTCTACGAGCTTCAGTTTGCTGTCCCAATGTCCGGAGCCATCT 324
Query 301 TAAACAACATCAACCCTCGCTTGGACGCACATGCACTCTCTGTCCTCCTGCGTCATAGTG 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 325 TAAACAACATCAACCCTCGTTTGGACGCACATGCACTCTCTGTCCTCCTGCGTCACAGTG 384
Query 361 AATCTAAGCTCGTTTTTGTCGATCCCAACTCAATCTCCTTAGTCCTTGAAGCAGTCTCGT 420
|||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||
Sbjct 385 AATCTAAGCTCGTTTTCGTCGATCCCAATTCAATCTCCGTAGTCCTCGAAGCAGTCTCGT 444
Query 421 TTTTG-GGACAACACGAGAAACCTCACCTTGTCCTCCTCGAAGACGACCAAGAGGACGGT 479
| || || ||| ||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 445 TCATGAGG-CAAAACGAGAAACCTCACCTTGTCCTCCTAGACGACGACCAAGAGGACGGT 503
Query 480 TCTTCGTCTGCTTCGGCCGCATCAGATTTTCTTGACACATACCAAGGAATTATGGAGAGA 539
|||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 504 TCTTTGTCTCCTTCGGCCGCATCAGATTTTCTTGACACATACCAAGGAGTTATGGAGAGA 563
Query 540 GGAGATTCGAGATTCAGGTGGATCCGTCCTCAAACCGAGTGGCAGCCAATGATTCTCAAC 599
|||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 564 GGAGATTCAAGATTCAAGTGGATCCGTCCTCAAACCGAGTGGCAGCCTATGATTCTCAAC 623
Query 600 TACACTTCTGGAACAACGTCGTCTCCCAAAGGAGTTGTGCTT-AGCCACAGAGCAATTTT 658
|| ||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||
Sbjct 624 TATACTTCTGGAACAACGTCATCTCCCAAAGGAGTAGTG-TTGAGCCACAGAGCAATTTT 682
Query 659 CATGCTAACCGTTAGCTCATTGCTTGATTGGCATTTTCCGAACCGGCCGGTTTACTTGTG 718
|||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 683 CATGCTAACCGTAAGCTCATTGCTTGACTGGCATTTTCCGAACAGGCCGGTTTACTTGTG 742
Query 719 GACTCTACCAATGTTCCACGCCAACGGTTGGGGATACACTTGGGGCACTGCAGCGGTTGG 778
|||||||||||||||||||||||| |||||||| || || ||||||||||| ||||||||
Sbjct 743 GACTCTACCAATGTTCCACGCCAATGGTTGGGGGTATACATGGGGCACTGCGGCGGTTGG 802
Query 779 AGCCACCAACGTCTGCACGCGTAGAGTCGATGCGCCGACTATATATGACTTGATCGATAA 838
|||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct 803 AGCCACCAACGTCTGCACCCGTAGAGTCGACGCGCCGACTATCTATGACTTGATCGATAA 862
Query 839 GCATCACGTAACTCACATGTGTGCGGCACCAATGGTTCTCAACATGCTAACCAATTACCC 898
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 863 GCATCACGTAACTCACATGTGTGCCGCACCAATGGTTCTCAACATGCTAACCAACTACCC 922
Query 899 GTCTCGTAAACCGCTAAAGAACCCGGTTCAGGTTATGACCGCTGGAGCTCCACCTCCGGC 958
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 923 GTCTCGTAAACCGCTAAAGAACCCGGTTCAGGTTATGACCGCCGGAGCTCCACCTCCAGC 982
Query 959 AGCCATCATCTCCAGAGCAGAAACCCTAGGTTTCAACGTCGGTCATGGGTACGGTTTAAC 1018
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 983 AGCCATCATCTCAAGAGCAGAAACCCTAGGTTTCAACGTCGGTCATGGGTACGGTTTAAC 1042
Query 1019 GGAAACCGGAGGCCCGGTTGTGTCATGTGCTTGGAAGGCTGAGTGGGATCATCTTGATCC 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1043 GGAAACCGGAGGCCCGGTTGTGTCATGTGCTTGGAAGGCTGAGTGGGATCATCTTGATCC 1102
Query 1079 ATTGGAGAGAGCTAGACTGAAATCAAGACAAGGAGTAAGAACCATCGGATTCGCGGATGT 1138
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1103 ATTGGAAAGAGCAAGACTGAAATCAAGACAAGGAGTAAGAACCATCGGATTCGCGGAAGT 1162
Query 1139 CGATGTTAGGGACCCGAGAACCGGGAAGAGTGTGGAACACGACGGAGTTTCTGTAGGAGA 1198
|||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 1163 TGATGTTAGGGACCCGAGAACCGGGAAGAGTGTGGAACACGACGGTGTTTCCGTTGGAGA 1222
Query 1199 GATCGTTTTAAAAGGTGGGTCGGTTATGCTTGGTTACTACAAAGACCCGGAAGGAACAGC 1258
||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1223 GATCGTTTTAAAAGGCGGTTCGGTTATGCTTGGTTACTACAAAGACCCTGAAGGAACCGC 1282
Query 1259 GGCGTGTATGAGAGAGGACGGATGGTTCTACAGCGGAGACGTAGGGGTTATACATAAAGA 1318
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 1283 AGCGTGTATGAGAGAGGACGGATGGTTCTACAGCGGAGACGTAGGAGTTATACATGAAGA 1342
Query 1319 CGGTTACTTGGAAGTTAAAGACCGGTCAAAGGATGTGATCATATGCGGAGGAGAGAACAT 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1343 CGGTTACTTGGAAGTTAAAGACCGGTCAAAGGATGTGATCATATGCGGAGGAGAGAACAT 1402
Query 1379 AAGTAGTGCTGAGGTTGAGACGGTTCTGTATACAAATCCGGTGGTGAAGGAAGCTGCGGT 1438
||||||||| ||||||||||||||||||||||||||||| || || || ||||| |||||
Sbjct 1403 AAGTAGTGCCGAGGTTGAGACGGTTCTGTATACAAATCCAGTAGTTAAAGAAGCCGCGGT 1462
Query 1439 GGTGGCTAAACCGGATAAAATGTGGGGAGAGACGCCGTGTGCTTTTGTGAGCTTGAAGTA 1498
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1463 GGTGGCTAAACCGGATAAGATGTGGGGAGAGACACCGTGTGCTTTTGTGAGCTTGAAGTA 1522
Query 1499 TGATAATAATGGTAATGGTTTGGTGACAGAGAGGGAAATAAGGGAGTTTTGTAAGACAAA 1558
||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||| |
Sbjct 1523 TGATAGTAATGGTAATGGGTTGGTGACTGAGAGGGAAATAAGGGAGTTTTGTAAGACGAG 1582
Query 1559 GTTACCTAAGTATATGGTTCCGAGGAAAGTGATTTTTCAGGAGGAGCTTCCAAAGACTTC 1618
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1583 GTTACCTAAGTATATGGTTCCAAGGAAAGTAATTTTTCAGGAGGAGCTTCCAAAGACTTC 1642
Query 1619 TACGGGAAAGATCCAAAAGTTTCTTCTTAGACAAATGGCTAAGTCCCTGCCTTAAAGATT 1678
||| |||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1643 TACTGGAAAGATACAGAAGTTTCTTCTAAGACAAATGGCTAAGTCTCTGCCTTAAAGATT 1702
Query 1679 CACTTAAGTTATTGAG 1694
| ||| ||||||||||
Sbjct 1703 CGCTTGAGTTATTGAG 1718
> AT1G21530.2 | Symbols: | AMP-dependent synthetase and ligase
family protein | chr1:7545151-7546936 REVERSE LENGTH=1650
Length=1650
Score = 1749 bits (947), Expect = 0.0
Identities = 1437/1671 (86%), Gaps = 43/1671 (3%)
Strand=Plus/Plus
Query 21 ATGGAACTCTTACTTCCACACCCTTCGAACTCAACACCTCTCACCGTCCTCGGCTTCTTG 80
||||||||||||||||||||||| || |||||||| || ||||||||||||||||||||
Sbjct 1 ATGGAACTCTTACTTCCACACCCATCAAACTCAACTCCACTCACCGTCCTCGGCTTCTTA 60
Query 81 GATCGAGCCGCCTCCGTCTATGGCGACTGTCCGTCCATCCTCCACGCCACTAACACCGTC 140
|| |||||||| ||||||||||| ||||||||||||||||||||| | | ||||||||
Sbjct 61 GACCGAGCCGCTTCCGTCTATGGTGACTGTCCGTCCATCCTCCACACTGCAAACACCGTT 120
Query 141 CACACTTGGTCCGAAACCCACAACCGCTGTCTTCGAATCGCCTCGGCTCTCACTTCATCC 200
|| |||||||||||||| || ||||||||||| || ||||| |||||||| ||||| |||
Sbjct 121 CATACTTGGTCCGAAACACATAACCGCTGTCTCCGTATCGCATCGGCTCTAACTTCCTCC 180
Query 201 TCTCTCGGCA-TAAACCAAGGCCAAGTCATCTCCGTCGTAGGCCCCAACGTCCCGTCTGT 259
||| |||| | |||| |||||||||||| |||| ||||| || |||||||||||||| ||
Sbjct 181 TCTATCGGAATTAAA-CAAGGCCAAGTCGTCTCTGTCGTGGGTCCCAACGTCCCGTCCGT 239
Query 260 TTACGAACTTCAGTTTGCTGTCCCAATGTCCGGAGCCATCTTAAACAACATCAACCCTCG 319
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CTATGAGCTTCAGTTTGCTGTCCCAATGTCCGGAGCCATCTTAAACAACATCAACCCTCG 299
Query 320 CTTGGACGCACATGCACTCTCTGTCCTCCTGCGTCATAGTGAATCTAAG-CTCGTTTTTG 378
||| |||||||| ||||||||||||||||||||||| || ||||| || |||||||| |
Sbjct 300 CTTAGACGCACACGCACTCTCTGTCCTCCTGCGTCACAGCGAATC-CAGACTCGTTTTCG 358
Query 379 TCGATCCCAAC--TCAATCTCCTTAGTCCTTGAAGCAGTCTCGTTTTTGGGACAACACGA 436
|||| ||| | || || |||||||||||||||||||| || || || |||||||||
Sbjct 359 TCGA--CCACCGTTCTATATCCTTAGTCCTTGAAGCAGTTTCATTATTCACACAACACGA 416
Query 437 GAAACCTCACCTTGTCCTCCTCGAAGACGACCAAGAGGACGGTTCTTCGTCTGCTTCGGC 496
|||||||||||| |||||||| || || ||||||||| || | ||| | | | | |
Sbjct 417 GAAACCTCACCTCGTCCTCCTGGACGATGACCAAGAGAAC-G--ATTC-T-T-CAT---C 467
Query 497 CGCATCAGATTTTCTTGACACATACCAAGGAATTATGGAGAGAGGAGATTCGAGATTCAG 556
||||||||||||||||||||| ||| ||| |||||||||||||||| |||| |||||||
Sbjct 468 CGCATCAGATTTTCTTGACACGTACGAAGAAATTATGGAGAGAGGAAATTCAAGATTCAA 527
Query 557 GTGGATCCGTCCTCAAACCGAGTGGCAGCCAATGATTCTCAACTACACTTCTGGAACAAC 616
||||||||||||||||||||| ||||| |||||| |||| ||||| ||||| ||||| ||
Sbjct 528 GTGGATCCGTCCTCAAACCGAATGGCAACCAATGGTTCTTAACTATACTTCCGGAACGAC 587
Query 617 GTCGTCTCCCAAAGGAGTTGTGCTTAGCCACAGAGCAATTTTCATGCTAACCGTTAGCTC 676
|||||||||||| ||||| || |||||||||||||| ||||||||||| || ||||||||
Sbjct 588 GTCGTCTCCCAAGGGAGTGGTACTTAGCCACAGAGCGATTTTCATGCTCACTGTTAGCTC 647
Query 677 ATTGCTTGATTGG-CATTTTCCGAACCGGCCGGTTTACTTGTGGACTCTACCAATGTTCC 735
|||||||||||| || | || |||||||| |||||||||||||||||||| ||||| |
Sbjct 648 CTTGCTTGATTGGTCA-GTACCAAACCGGCCAGTTTACTTGTGGACTCTACCGATGTTTC 706
Query 736 ACGCCAACGGTTGGGGATACACTTGGGGCACTGCAGCGGTTGGAGCCACCAACGTCTGCA 795
||||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 707 ACGCCAATGGTTGGGGTTACACTTGGGGCACCGCAGCGGTTGGAGCCACCAACATCTGCA 766
Query 796 CGCGTAGAGTCGATGCGCCGACTATATATGACTTGATCGATAAGCATC-ACGTAACTCAC 854
||||||||||||| || |||||||| || |||||||||||||||| | | || || |||
Sbjct 767 CGCGTAGAGTCGACGCACCGACTATTTACAACTTGATCGATAAGCA-CAATGTGACCCAC 825
Query 855 ATGTGTGCGGCACCAATGGTTCTCAACATGCTAACCAATTACCCGTCT-CGTAAACCGCT 913
|||||||| ||||| ||||||||||||||||||| || || || | | ||| |||||
Sbjct 826 ATGTGTGCTGCACCTATGGTTCTCAACATGCTAATTAACTATCCAT-TAAGTACGCCGCT 884
Query 914 AAAGAACCCGGTTCAGGTTATGACCGCTGGAGCTCCACCTCCGGCAGCCATCATCTCCAG 973
|||||||||||||||||||||||| |||||||||| || || ||| |||| |||||| |
Sbjct 885 CAAGAACCCGGTTCAGGTTATGACCTCTGGAGCTCCCCCACCAGCAACCATTATCTCCCG 944
Query 974 AGCAGAAACCCTAGGTTTCAACGTCGGTCA-TGGGTACGGTTTAACGGAAACCGGAGGCC 1032
||| || | || |||||||||||| | || | ||||||||||| || || | || |
Sbjct 945 AGCGGAGTCACTTGGTTTCAACGTCAGCCACT-CATACGGTTTAACAGAGACTAGCGGTC 1003
Query 1033 CGGTTGTGTCATGTGCTTGGAAGGCTGAGTGGGATCATCTTGATCCATTGGAGAGAGCTA 1092
||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||
Sbjct 1004 CGGTTGTGTCATGTGCTTGGAAGCCTAAGTGGGACCATCTTGATCCATTGGAGAGAGCTA 1063
Query 1093 GACTGAAATCAAGACAAGGAGTAAGAACCA-TCGGATTCGCGGATGTCGATGTTAGGGAC 1151
| ||||| ||||| ||||||||||||| || |||||||| |||| |||||||| |||||
Sbjct 1064 GGCTGAAGTCAAGGCAAGGAGTAAGAA-CACTCGGATTCACGGAAGTCGATGTAAGGGA- 1121
Query 1152 CCG-AGAACCGGGAAGAGTGTGGAACACGACGGAGTTTCTGTAGGAGAGATCGTTTTAAA 1210
|| | ||| || ||||||||| |||||||||||||||| || |||||||| ||||| |
Sbjct 1122 TCGAAAAACAGGAAAGAGTGTGAAACACGACGGAGTTTCGGTTGGAGAGATTGTTTTCAG 1181
Query 1211 AGGTGGGTCGGTTATGCTT-GGTTACTACAAAGACCCGGAAGGAACAGCGGCGTGTATGA 1269
||| | || || ||| || || |||||||||||||| ||||||| ||||| |||||||
Sbjct 1182 AGGCAGCTCAGTCATG-TTGGGATACTACAAAGACCCTCAAGGAACTGCGGCTTGTATGA 1240
Query 1270 GAGAGGACGGATGGTTCTACAGC-GGAGACGTAGGGGTTATACATAAAGACGGTTACTTG 1328
|||||||||| ||||||||| | |||||| | ||||||||||| ||||| |||||||||
Sbjct 1241 GAGAGGACGGGTGGTTCTAC-TCTGGAGACATCGGGGTTATACACAAAGATGGTTACTTG 1299
Query 1329 GAAG-TTAAAGACCGGTCAAAGGATGTGATCATATGCGGAGGAGAGAACATAAGTAGTGC 1387
| || | ||||| |||||||| ||||||||||||||||||||||| || ||||| || ||
Sbjct 1300 G-AGATCAAAGATCGGTCAAAAGATGTGATCATATGCGGAGGAGAAAATATAAGCAGCGC 1358
Query 1388 TGAGGTTGAGACGGTTCTGTATACAAATCCGGTGGTGAAGGAAGCTGCGGTGGTGGCTAA 1447
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1359 AGAGATTGAGACGGTTCTGTATACAAATCCGGTGGTGAAGGAAGCTGCGGTGGTGGCTAA 1418
Query 1448 ACCGGATAAAATGTGGGGAGAGACGCCGTGTGCTTTTGTGAGCTTGAAGTATGATAATAA 1507
||||||||| |||||||||||||| || |||||||||||||||||||||| |||||| ||
Sbjct 1419 ACCGGATAAGATGTGGGGAGAGACACCATGTGCTTTTGTGAGCTTGAAGTGTGATAACAA 1478
Query 1508 TGGTAATGGTTTGGT----G--ACAGAGAGGGAAATAAGGGAGTTTTGTAAGACAAAGTT 1561
|||| |||||| ||| | || ||||| || |||||||||||||||||||| |||||
Sbjct 1479 TGGTGATGGTTCGGTTCCCGTGACCGAGAGAGAGATAAGGGAGTTTTGTAAGACGAAGTT 1538
Query 1562 ACCTAAGTATATGGTTCCGAGGAAAGTGATTTTTCAGGAGGAGCTTCCAAAGACTTCTAC 1621
||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct 1539 ACCTAAGTACATGGTTCCGAGGAAAGTGATCTTTCAGGAGGAACTTCCCAAGACTTCCAC 1598
Query 1622 GGGAAAGATCCAAAAGTTTCTT-CTTAGACAAATGGCTAAGTCCCTGCCTT 1671
||||| || || |||||| || || ||||||||||||||| ||||| |||
Sbjct 1599 AGGAAAAATTCAGAAGTTT-TTGCTAAGACAAATGGCTAAGACCCTGTCTT 1648
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83734509060
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5