BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921262 Length=288 Score E Sequences producing significant alignments: (Bits) Value AT5G49525.1 | Symbols: | unknown protein; Has 23 Blast hits to... 424 3e-118 > AT5G49525.1 | Symbols: | unknown protein; Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:20097040-20097486 REVERSE LENGTH=447 Length=447 Score = 424 bits (229), Expect = 3e-118 Identities = 269/288 (93%), Gaps = 4/288 (1%) Strand=Plus/Plus Query 1 AGAAGAAGAGAGCAAAACTTGGTGATGTCAGCTTCCCGATGGACGTTGATGGATCTACCG 60 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 89 AGAAGAAGAGAGCAAAAATTGGTGATGTCAGCTTCCCGATGGACGTTGATGGATCTACCA 148 Query 61 TCGTATCTGTCGTCATCGTGGGCATTCCGGTGGCCGGAGGTGAATCTTTCATACCTGAGC 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 149 TCGTACCTGTCGTCATCGTGGGCATTCCGGTGGCCGGAGGTGAATCTTTCATCCCTGAGC 208 Query 121 TCTGGTTGGAACATGAGATTGTTGTCGTTGTCGGGTAATCTCTCCATAATCGATGATCTT 180 |||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||| Sbjct 209 TCTGGTTGGAACATGAGATTGTTGTCCTTGTCGGGTGATCTCTCCATAGTTGATGATCTT 268 Query 181 TTGTGGAGTTTTGTCTCGATCGTTGAATCTTTAGCTATCGTTACTACGATCTGTTGCTTC 240 ||||||||||||||||| ||| ||||||||||||||||| | ||||| ||||||||||| Sbjct 269 TTGTGGAGTTTTGTCTCAATCATTGAATCTTTAGCTATCACTGCTACGGTCTGTTGCTTC 328 Query 241 TTCTTGTTTTGTGGTTGTACCCTTTAATTCCTTCttttttttCATTAT 288 ||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct 329 TTCTTGTTTTGTGGTTGTACCCTCTAATTCC--CTTTTTT--CATTAT 372 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13270685736 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5