BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921472 Length=1205 Score E Sequences producing significant alignments: (Bits) Value AT1G24140.1 | Symbols: | Matrixin family protein | chr1:853604... 1700 0.0 > AT1G24140.1 | Symbols: | Matrixin family protein | chr1:8536045-8537387 REVERSE LENGTH=1343 Length=1343 Score = 1700 bits (920), Expect = 0.0 Identities = 1115/1209 (92%), Gaps = 14/1209 (1%) Strand=Plus/Plus Query 1 TTTTAATCTTTTTGTTTCAAATGATGAGGATTTATGTTTCCGTGGTTTTCTTGGTGTTCT 60 ||||||| ||| | ||| ||| ||||||||| ||||| | ||||||||||| |||||| Sbjct 83 TTTTAATATTTCTCTTTTGGATGGTGAGGATTTGTGTTTTCATGGTTTTCTTGTTGTTCT 142 Query 61 TTGTTCCTTCTCCAGTCTCTGCTGGTTTCTACCCCAACTCCTCAGCCATTCCGCCGGAGC 120 | | ||||||||||||||| ||||||||||| | ||||||||||||||||||||| ||| Sbjct 143 TCGCTCCTTCTCCAGTCTCCGCTGGTTTCTATACAAACTCCTCAGCCATTCCGCCGCAGC 202 Query 121 TTCTCCGTAACGCCACCGGAAACCCCTGGAACTCATTCTTGAATTTCACCGGATGTCATG 180 ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct 203 TTCTCCGAAACGCCACCGGGAACCCCTGGAACTCATTCTTGAATTTCACTGGATGTCACG 262 Query 181 CCGGCAAGAAATACGATGGTCTCTACAAGCTTAAACAATATTTCCAACATTTTGGCTACA 240 |||||||||| |||||||||||||| | ||| ||||||||||| |||||||||||||||| Sbjct 263 CCGGCAAGAAGTACGATGGTCTCTATATGCTCAAACAATATTTTCAACATTTTGGCTACA 322 Query 241 TCCCCAAAACTGATCTCTCCGGAAACTTCACAGACGACTTCGACGATATCCTCAAGAACG 300 || || ||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 323 TCACCGAAACTAATCTCTCCGGAAACTTCACTGACGACTTCGACGATATTCTCAAGAACG 382 Query 301 CCGTCGAAATGTACCAGAGAAACTTCCAGCTAAACGTCACCGGAGTACTCGACGAGCTCA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 383 CCGTCGAAATGTACCAGAGAAACTTCCAGCTAAACGTCACCGGAGTACTCGACGAGCTCA 442 Query 361 CTCTCAAACACGTCGTGATCCCGCGTTGCGGCAACCCCGACGTAGTCAACGGCACCTCAA 420 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 443 CTCTCAAACACGTTGTGATCCCACGTTGCGGCAACCCCGACGTAGTCAACGGCACCTCAA 502 Query 421 CTATGCATAGCGGTAGAAAAACCTTCGAGGTCTCCTTCGCCGGGCGGGGACAACACTTCC 480 |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| Sbjct 503 CTATGCATAGCGGTAGGAAAACCTTCGAGGTTTCCTTCGCCGGGCGGGGACAACGCTTCC 562 Query 481 ACACTGTCAAACACTACTCTTTCTTCCCCGGTGAGCCACGGTGGCCGAGAAATCGCCGTG 540 || | || ||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 563 ACGCCGTTAAACACTACTCTTTCTTCCCCGGAGAGCCACGGTGGCCGAGAAATCGTCGTG 622 Query 541 ATCTAACATACGCTTTCGACCCGCGAAACTCGTTGACAGAAGAGGTCAAGAGTGTGTTCT 600 ||||||| ||||||||||||||||||||| ||||||| |||||||||||||| ||||||| Sbjct 623 ATCTAACCTACGCTTTCGACCCGCGAAACGCGTTGACCGAAGAGGTCAAGAGCGTGTTCT 682 Query 601 CACGCGCGTTCGCTCGTTGGGCGGAGGTGACTCCACTAACGTTCACGCGCGTGGAAAGGT 660 ||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||| |||| Sbjct 683 CACGCGCTTTCACTCGTTGGGAGGAGGTGACTCCACTAACGTTCACACGCGTGGAGAGGT 742 Query 661 TCTCGACCTCCGACATAAGCATCGGATTCTACTCCGGCGAACACGGCGACGGAGAACCAT 720 |||||||||| ||||| |||||||||||||||||||| || ||||| ||||||||||| | Sbjct 743 TCTCGACCTCTGACATCAGCATCGGATTCTACTCCGGAGAGCACGGAGACGGAGAACCGT 802 Query 721 TTGACGGCCCAATGAGAACGCTAGCACACGCATTCTCGCCCCCGACAGGATACTTCCACC 780 | |||||||||||||||||||||||||| || |||||||||||||| ||| ||||||| | Sbjct 803 TCGACGGCCCAATGAGAACGCTAGCACATGCGTTCTCGCCCCCGACGGGACACTTCCATC 862 Query 781 TAGACGGAGAAGAGAACTGGATCGTCTCCGGTGAAGGAGGCGACGGTTTTATCTCCGTCG 840 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 863 TAGACGGAGAAGAGAACTGGATCGTCTCCGGCGAAGGAGGCGACGGTTTTATCTCCGT-G 921 Query 841 A-TGAGGCTGTTGATCTAGAATCGGTGGCTGTTCACGAGATCGGACATCTTCTAGGGTTA 899 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 922 TCTGAGGCTGTTGATCTAGAATCGGTGGCTGTTCACGAGATTGGACATCTTCTAGGGTTA 981 Query 900 GGCCATTCCTCGGTGGAAGGTTCGATCATGTATCCAACCATCAGGACGGGTAGACGTAAA 959 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 982 GGCCATTCCTCGGTAGAAGGTTCGATCATGTATCCAACCATCAGGACGGGTAGGCGTAAA 1041 Query 960 GTTGCTTTAACGACCGATGACGTGGAAGGAGTCCAATATTTGTACGGTGGGAATCCTAAC 1019 |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1042 GTTGATTTAACGACCGATGACGTGGAAGGAGTCCAATATTTGTACGGTGCGAATCCTAAC 1101 Query 1020 TTTAACGGCTCTAGATCTCCATCACCGTCTACTCAACAACGAGACACTGGCGATTCCGGT 1079 || || || |||||||||||| ||||||| |||||||||||||||||||||||||| ||| Sbjct 1102 TTCAATGGTTCTAGATCTCCACCACCGTCCACTCAACAACGAGACACTGGCGATTCTGGT 1161 Query 1080 GCTGCTGGTAGAAACGACGGTTCTAGATCGGTTTTGACTAATCTACTTCTGTATTAT--- 1136 ||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1162 GCTCCTGGTAGAAGCGACGGTTCTAGATCGGTTTTGACTAATCTACTTCAGTATTATTTT 1221 Query 1137 ---ATT-T----GGATTATTTTCGTATTTAGTGTAGATGATTGGATTAGTTCAT-AATTT 1187 ||| | |||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 1222 TGGATTATATTTGGATTATTTTTGTATTTAGTGTAGATGATTGGATTAGTTCATTAATTT 1281 Query 1188 ACAGATTAT 1196 ||||||||| Sbjct 1282 ACAGATTAT 1290 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59186442555 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5