BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921731 Length=1308 Score E Sequences producing significant alignments: (Bits) Value AT1G67800.2 | Symbols: | Copine (Calcium-dependent phospholipi... 937 0.0 > AT1G67800.2 | Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr1:25420780-25423403 REVERSE LENGTH=1717 Length=1717 Score = 937 bits (507), Expect = 0.0 Identities = 755/873 (86%), Gaps = 23/873 (3%) Strand=Plus/Plus Query 202 AGAAGAAGTTTTCACAGATCGGTGATTACTACCGTTCCATTGATGAGGTTACGGGTGCTC 261 ||| ||||| ||||| ||| | |||| ||||||||||||||||||||||||| | ||||| Sbjct 357 AGAGGAAGTATTCACGGATTGCTGATAACTACCGTTCCATTGATGAGGTTACCGCTGCTC 416 Query 262 TTTCTCATGCTGGTTTGGAGTCATCGAATTTGATTGTTGGTATTGATGTCACTAAGAGCA 321 |||| ||||| ||||||||||| |||||| | ||||||||||| |||||||| ||||||| Sbjct 417 TTTCACATGCCGGTTTGGAGTCCTCGAATCTCATTGTTGGTATAGATGTCACCAAGAGCA 476 Query 322 ATGAGTGGACAGGAGCGAGCTCATTTAACAGGCAA-AGCT-TGCATTACATTGGAACAAC 379 | ||||||||||| ||||| |||||| ||| || || | |||||| ||||||||| || Sbjct 477 ACGAGTGGACAGGGGCGAGATCATTTGGTAGG-AAGAG-TCTGCATTTCATTGGAACTAC 534 Query 380 TCCAAACCCGTACCAGCAAGCGATTTCTATTATCGGAAAGACTTTATCCGCTTTCGATGA 439 ||||||||| || || ||||| ||||| || || |||||||||||||| | ||| ||||| Sbjct 535 TCCAAACCCTTATCAACAAGCTATTTCCATCATTGGAAAGACTTTATCGGTTTTTGATGA 594 Query 440 GGATAATTTGATCCCTTGTTATGGTTTTGGAGATGCTACAACACATGATCAGAATGTCTT 499 ||||||||||||||| |||||||| ||||||||||||||||| ||||||||| ||||||| Sbjct 595 GGATAATTTGATCCCCTGTTATGGATTTGGAGATGCTACAACTCATGATCAGGATGTCTT 654 Query 500 CAGTTTCTATCCGGATGATACAT-TCTGTAATGGGTTTGAAGATGTCCTTTCA--CGTTA 556 ||||||| |||| ||||||||| | ||||| ||||||||||| || | ||| |||| Sbjct 655 CAGTTTCAATCCCAATGATACATAT-TGTAACGGGTTTGAAGAAGT--TCTCATGTGTTA 711 Query 557 CAGAGAGATTGTTCCTCAGCTGCATCT-TGCAGGGCCGACTTCTTTTGCACCCATCATCG 615 ||||||||||||||| ||||| | ||| | |||| ||||| ||||||||||| ||||||| Sbjct 712 CAGAGAGATTGTTCCCCAGCTTCGTCTCT-CAGGTCCGACATCTTTTGCACCTATCATCG 770 Query 616 AAAGGGCCATGACAATCGTGGAAGAAAGTGGAGGACAGTACCATGTTCTTCTCATAATCG 675 |||||||||||||||| |||||||||||||| || |||||||||||||||||||| |||| Sbjct 771 AAAGGGCCATGACAATTGTGGAAGAAAGTGGTGGCCAGTACCATGTTCTTCTCATTATCG 830 Query 676 CTGATGGACAGGTGACAAGAAGTGTTGATACCA-ATCAA-GGTGGCCTCAGCTC-ACAAG 732 ||||||||||||||||||||||||||||||| | || || ||||| |||| || ||||| Sbjct 831 CTGATGGACAGGTGACAAGAAGTGTTGATAC-AGAT-AACGGTGGATTCAG-TCCACAAG 887 Query 733 AACAAAAGACCATTGATGCAATTGTTAGAGCTAGCGCATATCCTCTATCGATAGTTCTGG 792 | || |||| |||||||| ||||||||||| || | ||||||| | || |||||||| | Sbjct 888 AGCAGCAGACTATTGATGCCATTGTTAGAGCAAGTGAATATCCTTTGTCTATAGTTCTTG 947 Query 793 TTGGTGTTGGAGATGGTCCTTGGGATACAATGAGACAGTTTGATGACAACATCCCTGCTC 852 ||||||||||||||||||| ||||| || |||||||||||||||||||||||||| |||| Sbjct 948 TTGGTGTTGGAGATGGTCCCTGGGACACCATGAGACAGTTTGATGACAACATCCCCGCTC 1007 Query 853 GTGCCTTTGACAATTTTCAATTTGTGAATTTCACGGAGATTATGGCAAAGAACATTGATC 912 |||||||||||||||| || ||||||||||||||||| || ||| ||||||||||||||| Sbjct 1008 GTGCCTTTGACAATTTCCAGTTTGTGAATTTCACGGATATAATGTCAAAGAACATTGATC 1067 Query 913 CTGGAAGAAAAGAAGCAGAATTTGCACTTTCCGCCTTGATGGAGATCCCGTCTCAGTATA 972 | | ||||||||| |||||||| || ||||| |||||||||||||||||||||||||||| Sbjct 1068 CAGCAAGAAAAGAGGCAGAATTCGCGCTTTCTGCCTTGATGGAGATCCCGTCTCAGTATA 1127 Query 973 AGGCCACCCTCGAGCTCGGCTTACTCGGA-AGAAGAACAGGAAAGTCTCCAAACAAGATT 1031 | ||||||||||| || |||||||| ||| | |||||| ||| | | |||| ||| |||| Sbjct 1128 AAGCCACCCTCGAACTAGGCTTACTTGGACA-AAGAACCGGACATTGTCCAGACAGGATT 1186 Query 1032 GCTCTTCCACCACCAA-TCAGTGCTACT-AATC 1062 || ||||||||||||| | | ||||||| |||| Sbjct 1187 GCGCTTCCACCACCAACTTA-TGCTACTCAATC 1218 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64357098690 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5