BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921733 Length=1297 Score E Sequences producing significant alignments: (Bits) Value AT1G24530.1 | Symbols: | Transducin/WD40 repeat-like superfami... 2073 0.0 > AT1G24530.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:8693227-8694705 FORWARD LENGTH=1479 Length=1479 Score = 2073 bits (1122), Expect = 0.0 Identities = 1240/1298 (96%), Gaps = 3/1298 (0%) Strand=Plus/Plus Query 3 TTACCAAACATCG-AA--ACCATGAGGGTTATCTCAAAGCTGTTCGATTCCGACAGAAGA 59 ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| Sbjct 40 TTACCAAACATCGAAACCACCATGAGGGTTATCTCAAAACTGTTCGATTCCGACAGAAGA 99 Query 60 CGAACACCGAAATCGCCGAAGCATTTGGATTCCGACGAAAGCTTCACGTTATCTTCATCA 119 |||| ||| ||||||||||||||||||||||||| ||||||| ||||| |||||| ||| Sbjct 100 CGAATACCCAAATCGCCGAAGCATTTGGATTCCGGCGAAAGCGCCACGTCATCTTCCTCA 159 Query 120 CTCAGCGACGTAACCACCGGCTCAAGCAGCCTCCATAGCAGTCTCTCTCTCCAGACGCTT 179 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 160 CTCAGCGACGTAACCACCGGCTCAAGCAGCCTTCATAGCAGTCTCTCTCTCCAAACGCTT 219 Query 180 CCTTCAGTTCCTTCTCTTCAGAAAATCCCATCCACCACCGTCACCGTCTCTCACTCCGTT 239 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 220 CCTTCAGTTCCCTCTCTTCAGAAAATCCCATCCACCACCGTCACCGTCTCTCACTCCGTT 279 Query 240 ACCTCCTCGTTTAAACTCCGTGAACGAAGTCTTCCTGTAACTTGTCTCGCCGTCAACGGT 299 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 280 ACCTCCTCGTTTAAACTCCGTGAACGGAGTCTTCCTGTAACTTGTCTCGCCGTCAATGGT 339 Query 300 GGCTATCTCTTTGCCGTTTCTGGACATGAAGTTAGTATCTACGATCGCGACATGTGTGCT 359 || || ||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||| Sbjct 340 GGTTACCTCTTCGCCGTGTCTGGACACGAAGTAAGTATCTACGATCGCGACATGTGTGCT 399 Query 360 CATCTAGACACATTCAACGGCCAAGATCCTTTCTCAGGAACCGTTAAGTCCGTCGGCTTC 419 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 400 CATCTCGACACATTCAACGGCCAAGATCCTTTCTCAGGAACCGTGAAGTCCGTCGGCTTC 459 Query 420 TCCGGTGAGAAAATTTTCACGGCGCATCAAGACGGTAAAATCGGAGTTTGGAAACTAACG 479 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 460 TCCGGTGAGAAAATCTTCACGGCGCATCAAGACGGTAAAATCGGAGTTTGGAAACTTACG 519 Query 480 GCGAAGAGCGGTTATAAACAGTTAACGACGCTTCCTACTTTAAACGACCGTTTACGACGT 539 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 520 GCGAAAAGCGGTTATAAACAGTTAACGACGCTTCCTACTTTAAACGACCGTTTACGACGT 579 Query 540 TTCGCTCTTCCCAAAAACTACGTTCAAGTACGCCGTCATAAGAAACGTCTCTGGATCGAA 599 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 580 TTCGCTCTTCCTAAAAACTACGTTCAAGTACGCCGTCATAAGAAACGTCTCTGGATCGAA 639 Query 600 CATGCTGACGCCGTTACTGCTCTTGCCGTTAATAACGGATTTATTTACTCTGTTTCTTGG 659 ||||||||||||||||||||||| ||||||| | ||||||| |||||||||||||||||| Sbjct 640 CATGCTGACGCCGTTACTGCTCTCGCCGTTAGTGACGGATTCATTTACTCTGTTTCTTGG 699 Query 660 GATAAGACCTTGAAGATATGGAGAGCCTCTGATCTTCGTTGCAAAGAGTCAATCAAAGCA 719 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 700 GATAAGACTTTGAAGATATGGAGAGCCTCCGATCTTCGTTGCAAAGAATCAATCAAAGCT 759 Query 720 CACGATGACGCCGTTAATGCCGTCGCCGTCTCTACTAACGGCACCGTTTATACTGGATCC 779 ||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| Sbjct 760 CACGATGACGCCGTTAATGCCATTGCCGTTTCTACTAACGGCACCGTTTACACTGGATCC 819 Query 780 GCAGATAGACGTATCCGGGTGTGGGCCAAACCGACCGGTGAGAAACGTCACACGTTAGTC 839 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 820 GCGGATAGACGTATCCGGGTTTGGGCCAAACCGACCGGTGAGAAACGTCACACGTTAGTT 879 Query 840 GCGACTTTGGAAAAGCATAAATCGGCGGTTAACGCATTGGCATTAAACGACGACGGATCG 899 |||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 880 GCGACTTTAGAGAAGCACAAATCGGCGGTTAACGCATTAGCATTAAACGACGACGGATCG 939 Query 900 GTTTTATTCTCCGGTTCGTGTGACCGGTCTATTTTGGTTTGGGAGAGAGAAGACACTTCC 959 ||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 940 GTTTTGTTCTCCGGTTCGTGTGACCGGTCTATTTTGGTTTGGGAGAGAGAGGATACTTCC 999 Query 960 AATTACATGGCGGTGAGAGGTGCTTTGAGGGGACATGATAAAGCAATACTTAGCTTGTTC 1019 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1000 AATTACATGGCGGTGAGAGGTGCGTTGAGGGGACATGATAAAGCAATACTTAGCTTGTTC 1059 Query 1020 AACGTCTCTGATTTGCTACTAAGTGGATCAGCTGATCGGACGGTCAGAATTTGGCGACGT 1079 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 1060 AACGTCTCTGATTTGCTACTCAGTGGATCAGCTGATCGGACGGTCAGGATTTGGCGACGT 1119 Query 1080 GGACCGGATTCTAGTTATAGTTGTTTGGAGGTTCTTTCCGGTCATACGAAGCCGGTTAAG 1139 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1120 GGACCCGATTCTAGTTATAGTTGTTTGGAGGTTCTTTCCGGTCATACCAAGCCGGTTAAG 1179 Query 1140 TCGTTGGCGGCGGTTAGAGAAAAGGAGTTAGACGATGTCGTTTCGATCGTTAGTGGAAGT 1199 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1180 TCGTTGGCGGCGGTTAGAGAAAAGGAGTTAGACGATGTCGTTTCGATCATTAGTGGAAGT 1239 Query 1200 CTTGACGGAGAGGTTAAATGTTGGAAGGTGTCCGTCACCAAACCGGATAATTCATTTTAC 1259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1240 CTTGACGGAGAGGTTAAATGTTGGAAGGTGTCCGTCACCAAACCGGATAATTCATTTTAC 1299 Query 1260 ACGAATCTCGTTCAATAAATTAATGGGATTAATTTGTT 1297 |||||||||||||||||||||| ||| ||||||||||| Sbjct 1300 ACGAATCTCGTTCAATAAATTAGTGGCATTAATTTGTT 1337 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63804892695 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5