BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922337 Length=549 Score E Sequences producing significant alignments: (Bits) Value AT1G32470.1 | Symbols: | Single hybrid motif superfamily prote... 894 0.0 AT2G35370.1 | Symbols: GDCH | glycine decarboxylase complex H |... 584 3e-166 > AT1G32470.1 | Symbols: | Single hybrid motif superfamily protein | chr1:11739304-11740361 REVERSE LENGTH=791 Length=791 Score = 894 bits (484), Expect = 0.0 Identities = 526/546 (96%), Gaps = 4/546 (1%) Strand=Plus/Plus Query 6 aaaaaaagaaaccagaagaaa-aaaTGGCATTGAGAATGTGGGCTTCCTCTACAGCAAAT 64 ||| ||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||| Sbjct 93 AAACAAACAAACCAGAA-AAAGGAATGGCACTGAGAATGTGGGCTTCCTCTACAGCAAAT 151 Query 65 Gctctcaagctctcttcttctgtctccaaatctcatctcttgccagctttctctatctcc 124 |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct 152 GCTCTCAAGCTCTCTTCTTCTGCCTCCAAATCTCATCTCTTGCCAGCTTTCTCCATCTCC 211 Query 125 agatgcttctcCTCAGTGTTGGAAGGACTTAAGTATGCAAATTCACATGAGTGGGTGAAA 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 212 AGATGCTTCTCCTCAGTGTTGGAAGGACTTAAGTATGCAAATTCACATGAGTGGGTGAAA 271 Query 185 CATGATGGCTCAGTTGCTACAATTGGTATCACTGACCATGCCCAGGACCATTTAGGAGAA 244 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 272 CATGAAGGCTCAGTTGCTACAATTGGTATCACTGACCATGCGCAGGACCATTTAGGAGAA 331 Query 245 GTTGTATTTGTGGAGCTACCAGAAGCAAACAGTTCAGTGAGCAAAGAAAAAAGCTTTGGA 304 ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 332 GTTGTGTTTGTGGAGCTGCCTGAAGCAAACAGTTCAGTGAGCAAAGAAAAAAGCTTTGGA 391 Query 305 GCTGTTGAGAGTGTTAAGGCCACAAGTGAGATTCTATCTCCAATCTCCGGTGAAGTCATT 364 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 392 GCTGTTGAGAGTGTTAAGGCCACAAGTGAGATTCTATCTCCAATCTCTGGTGAAGTCATT 451 Query 365 GAGGTTAACACGAAGCTCACCGAGTCACCTGGTTTGATCAACTCAAGCCCTTATGAAGAT 424 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 452 GAGGTTAACACAAAGCTCACCGAGTCACCTGGTTTGATCAACTCAAGCCCTTATGAAGAT 511 Query 425 GGTTGGATGATAAAGGTGAAACCAAGCAGCCCCGCGGAGTTGGAAGC-CTTGATGGGTCC 483 ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct 512 GGTTGGATGATAAAGGTGAAACCGAGCAGCCCCGCGGAGTTGGAAGCTCT-GATGGGTCC 570 Query 484 AAAGGAATACACCAAGTTCTGCGAAGATGAAGACGCTGCTCACTAGGGTTTCTTCGCCTT 543 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 571 AAAGGAATACACCAAGTTCTGCGAAGAAGAAGACGCTGCTCACTAGGGTTTCTTCGCCTT 630 Query 544 TCATCT 549 | |||| Sbjct 631 TTATCT 636 > AT2G35370.1 | Symbols: GDCH | glycine decarboxylase complex H | chr2:14891102-14892218 FORWARD LENGTH=803 Length=803 Score = 584 bits (316), Expect = 3e-166 Identities = 451/515 (88%), Gaps = 13/515 (3%) Strand=Plus/Plus Query 21 aagaaaaaaTGGCATTGAGAATGTGGGCTTCCTCTACAGCAAATGctctcaagctctctt 80 ||| |||||||||| | |||||||||||||| ||||||||||| ||||||||||| |||| Sbjct 130 AAGCAAAAATGGCACTAAGAATGTGGGCTTCTTCTACAGCAAACGCTCTCAAGCTTTCTT 189 Query 81 cttctgtctccaaatctcatctcttgccagctttct-ctatctccagatgcttctcCTCA 139 ||||||| ||||| ||||||||| | | |||||| || |||| |||||||||||| || Sbjct 190 CTTCTGTTTCCAAGTCTCATCTC-T--CTCCTTTCTCCT-TCTCTAGATGCTTCTCCACA 245 Query 140 GTGTTGGAAGGACTT-AAGTATGCAAATTCACATGAGTGGGTGAAACATGATGGCTCAGT 198 || |||| ||| || |||||||||||||||||||||||||| |||||||| ||||| || Sbjct 246 GTTTTGG-AGGGTTTGAAGTATGCAAATTCACATGAGTGGGTTAAACATGAAGGCTCTGT 304 Query 199 TGCTACAATTGGTATCACTGACCATGCCCAGGACCATTTAGGAGAAGTTGTATTTGTGGA 258 ||| || ||||| ||||||| |||||| |||||||||||||| ||||| || ||||| || Sbjct 305 TGCCACCATTGGCATCACTGCCCATGCTCAGGACCATTTAGGTGAAGTGGTGTTTGTTGA 364 Query 259 GCTACCAGAAGCA-AACAGTTCAGTGAGCAAAGAAAAAAGCTTTGGAGCTGTTGAGAGTG 317 || |||| || | || | ||||||||||||||| |||||||||||||| || ||||||| Sbjct 365 ACTGCCAG-AGGACAATACTTCAGTGAGCAAAGAGAAAAGCTTTGGAGCAGTGGAGAGTG 423 Query 318 TTAAGGCCACAAGTGAGATTC-TATCTCCAATCTCCGGTGAAGTCATTGAGGTTAACACG 376 | ||||| |||||||||| || |||| |||||||| |||||| ||||||||||||||| | Sbjct 424 TGAAGGCAACAAGTGAGA-TCTTATCACCAATCTCAGGTGAAATCATTGAGGTTAACAAG 482 Query 377 AAGCTCACCGAGTCACCTGGTTTGATCAACTCAAGCCCTTATGAAGATGGTTGGATGAT- 435 |||||||| || |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 483 AAGCTCACAGAATCACCTGGCTTGATCAACTCAAGCCCCTATGAAGATGGTTGGATGATC 542 Query 436 AAAGGTGAAACCAAGCAGCCCCGCGGAGTTGGAAGCCTTGATGGGTCCAAAGGAATACAC 495 ||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| Sbjct 543 AAA-GTGAAACCAAGTAGCCCCGCGGAGTTGGAATCTTTGATGGGTCCAAAGGAATACAC 601 Query 496 CAAGTTCTGCGAAGATGAAGACGCTGCTCACTAGG 530 |||||||||||| || ||||| ||||||||||||| Sbjct 602 CAAGTTCTGCGAGGAGGAAGATGCTGCTCACTAGG 636 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26322693028 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5