BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922345 Length=586 Score E Sequences producing significant alignments: (Bits) Value AT1G32550.2 | Symbols: FdC1 | 2Fe-2S ferredoxin-like superfamil... 529 1e-149 > AT1G32550.2 | Symbols: FdC1 | 2Fe-2S ferredoxin-like superfamily protein | chr1:11771969-11774117 REVERSE LENGTH=585 Length=585 Score = 529 bits (286), Expect = 1e-149 Identities = 355/387 (92%), Gaps = 9/387 (2%) Strand=Plus/Plus Query 21 ATGGCTCTGATTTTGCCGTGTACATTTTATACTTCGCTTCAGCAGAAGAAGTTTCCGATT 80 ||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 1 ATGGCTCTGATTTTGCCCTGTACATTTTGTACTTCGCTTCAGAAGAAGAATTTTCCGATT 60 Query 81 AATCGGAGATATTTTCCGAATCTCCGTCGAGGAGTTACGACTACGACTTGTGAGTTCCGA 140 |||||||||||| || ||||| |||||||||||| ||||||| |||| ||||||||||| Sbjct 61 AATCGGAGATATATTACGAATTTCCGTCGAGGAGCTACGACTGCGACGTGTGAGTTCCGG 120 Query 141 ATTCCTGTAGAAGTTTCCACTCCATCAGATAGAGGATCGTTGAATGTTCCTTCACATAAG 200 |||||||||||||||||||||||||||||||||||||||||| ||||||||| || || Sbjct 121 ATTCCTGTAGAAGTTTCCACTCCATCAGATAGAGGATCGTTGGTTGTTCCTTCGCACAAA 180 Query 201 GTCACTGTTCACGATCGACAACGAGGAGTTGTTCACGAATTTGAGGTTCCAGAGGATCAG 260 ||||||||||||||||||||||||||||| ||||||||||| | ||||||||| Sbjct 181 GTCACTGTTCACGATCGACAACGAGGAGTGGTTCACGAATT-------C--GAGGATCAG 231 Query 261 TATATATTGCACTCAGCTGAATCTCAGAACATTACTCTTCCGTTTGCTTGCAGGCATGGT 320 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 232 TATATATTGCATTCAGCTGAATCTCAGAACATTAGTCTTCCGTTTGCTTGCAGGCATGGT 291 Query 321 TGCTGTACTAGTTGTGCCGTACGTGTAAAATCTGGAGAGCTGAGGCAGCCACAAGCATTG 380 || |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 292 TGTTGTACTAGTTGTGCTGTACGTGTAAAATCTGGAGAGCTGAGGCAGCCTCAAGCATTG 351 Query 381 GGAATATCAGCAGAGCTGAAGTCCCAG 407 |||||||||||||| |||||||||||| Sbjct 352 GGAATATCAGCAGAACTGAAGTCCCAG 378 Score = 267 bits (144), Expect = 1e-70 Identities = 154/159 (97%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 408 GGGTATGCACTTCTTTGTGTGGGTTTCCCTACATCTGACCTTGAAGTAGAAACACAAGAC 467 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 427 GGGTATGCACTTCTTTGTGTGGGTTTCCCCACATCTGACCTTGAAGTAGAAACACAAGAC 486 Query 468 GAGGACGAGGTCTACTGGCTACAATTTGGAAGATACTTCGCTCGTGGACCAATTGAAAGA 527 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 487 GAGGACGAGGTCTACTGGCTACAATTTGGAAGATACTTTGCTCGTGGACCAATTGAAAGA 546 Query 528 GACGATTACGCCCTTGAACTCGCCATGGGAGACGAGTAG 566 ||||||||||| |||||||||||||||||||| || ||| Sbjct 547 GACGATTACGCTCTTGAACTCGCCATGGGAGATGAATAG 585 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28181356467 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5