BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922408
Length=1525
Score E
Sequences producing significant alignments: (Bits) Value
AT1G33110.1 | Symbols: | MATE efflux family protein | chr1:120... 2433 0.0
AT1G33100.1 | Symbols: | MATE efflux family protein | chr1:119... 1903 0.0
AT1G33090.1 | Symbols: | MATE efflux family protein | chr1:119... 1881 0.0
AT1G33080.1 | Symbols: | MATE efflux family protein | chr1:119... 1406 0.0
> AT1G33110.1 | Symbols: | MATE efflux family protein | chr1:12004927-12008833
FORWARD LENGTH=1857
Length=1857
Score = 2433 bits (1317), Expect = 0.0
Identities = 1436/1495 (96%), Gaps = 2/1495 (0%)
Strand=Plus/Plus
Query 15 TCCAAGATGGCCGGAGGAGGAGGAGAGCTCACGGCGGCTTTGCTGAATAAGACGGCGGCG 74
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |
Sbjct 152 TCCAAGATGGCCGGAGGAGGAGGAGAGCTCACGGCGGCTTTGTTGAAAAAGACGGCGGAG 211
Query 75 AACGGCGGAGAAGAAG-AGGATGAGTTAGGGTTGAAGCAAAAGGTTTGGATTGAATCAAA 133
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 AACGGCGGAGAAG-AGAAGGATGAGTTAGGGTTGAAGCAAAAGGTTTGGATTGAATCAAA 270
Query 134 GAAGCTATGGGTTGTGGCGGCGCCGGCGATCTTCACGAGGTTCTCAACGTTCGGAGTTTC 193
|||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 271 GAAGCTATGGATTGTGGCGGCGCCAGCGATCTTCACGAGATTCTCAACGTTCGGAGTTTC 330
Query 194 AATAATAAGTCAGTCTTTCATCGGCCATCTTGGTCCTATAGAGTTGGCCGCTTACTCTAT 253
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 331 AATAATAAGTCAATCTTTCATCGGCCATCTTGGTCCTATAGAGTTGGCTGCTTACTCTAT 390
Query 254 CACCTTCACCGTTCTCCTCCGGTTTAGTAATGGTATCTTGTTAGGTATGGCCAGTGCATT 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 391 CACCTTCACCGTTCTCCTCCGGTTTAGTAATGGTATCTTGTTAGGTATGGCCAGTGCATT 450
Query 314 GGAAACACTATGTGGTCAAGCCTACGGAGCTAAACAAAATCATATGCTCGGGATCTACCT 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 451 GGAAACACTATGTGGTCAAGCCTACGGAGCTAAACAAAATCATATGCTCGGGATCTACCT 510
Query 374 CCAAAGGTCATGGATCGTCCTCACAGGTTGTACCATTTGCCTCACGCCCGTCTATATCTT 433
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 511 CCAAAGGTCATGGATCGTCCTTACAGGTTGTACCATTTGCCTCACGCCCGTCTATATCTT 570
Query 434 TTCAGGCCCTATCCTCTTAGCCTTAGGTCAAGAGGAACGCATTGTCCGTGTGGCTCGGAT 493
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 571 CTCTGGCCCTATCCTCTTAGCCTTAGGTCAAGAGGAACGCATTGTCCGTGTGGCTCGGAT 630
Query 494 CATAGCCCTATGGGTCATAGGCATCAACTTCTCCTTTGTGCCTTCCTTCACTTGCCAAAT 553
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 631 CATAGCCCTATGGGTCATAGGCATCAACTTCTCTTTTGTGCCTTCCTTCACTTGCCAAAT 690
Query 554 GTTCCTCCAAGCTCAGAGCAAAAACAAGATCATTGCCTACGTGGCTGCTGTCTCCTTAGG 613
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 691 GTTCCTCCAAGCTCAGAGCAAGAACAAGATCATTGCCTACGTGGCTGCTGTCTCCTTAGG 750
Query 614 GGTCCATGTTTTCTTGTCGTGGCTACTTATGGTTCATTTCAATTTCGGGATCACTGGTGC 673
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 751 GGTCCATGTCTTCTTGTCGTGGCTACTTATGGTTCATTTCAATTTTGGGATCACTGGTGC 810
Query 674 TATGACCTCTACTCTAGTTGCGTTCTGGTTGCCTAACATTGCGCAACTCTTGTTTGTCAC 733
|||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct 811 TATGACCTCTACGCTAGTTGCGTTCTGGTTGCCTAATATTGCCCAACTCTTGTTCGTCAC 870
Query 734 GTGCGGTGGGTGTAAGGACACATGGAGAGGATTCACTATGTTGGCCTTCAAAGATTTATG 793
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 871 GTGCGGTGGGTGTAAGGACACATGGAGAGGATTCTCTATGATGGCCTTCAAAGATTTATG 930
Query 794 GCCTGTCTTCAAACTATCTCTGTCTTCCGGTGGAATGCTTTGCTTGGAACTATGGTACAA 853
||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 931 GCCCGTCTTCAAACTTTCTATGTCTTCCGGTGGAATGCTTTGCTTGGAACTATGGTACAA 990
Query 854 CTCGATCTTGGTACTGCTCACTGGAAATTTGAAAAACGCAGAAGTGGCTCTTGATGCACT 913
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 991 CTCAATCTTGGTACTGCTCACTGGAAATTTGAAAAACGCAGAAGTGGCTCTTGATGCACT 1050
Query 914 AGCAATCTGCCTCAACATAAATGGATTGGAGATGATGATAGCACTTGGGTTTTTGGCAGC 973
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1051 AGCAATCTGCCTCAACATAAATGGACTGGAGATGATGATAGCACTTGGGTTTTTGGCAGC 1110
Query 974 TGCAAGTGTAAGAGTCTCCAACGAACTCGGTAGTGGAAACCCCAAAGGAGCCAAGTTTGC 1033
|||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1111 TGCAAGCGTAAGAGTGTCCAACGAGCTCGGTAGTGGAAACCCCAAAGGAGCCAAGTTTGC 1170
Query 1034 AACATTGACAGCGGTTTTCACATCACTATCCATAGGAATGGTTCTATTCTTCATCTTCTT 1093
|||| | || ||||||||||||||||| || ||||||| |||||||||||| |||||||
Sbjct 1171 AACACTAACCGCGGTTTTCACATCACTCTCTTTAGGAATAGTTCTATTCTTCGTCTTCTT 1230
Query 1094 GTTTCTAAGAGGAAGAGTTTCCTACATTTTCACTACAAGTGAAGCTGTCGCAGCCGAAGT 1153
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1231 GTTTCTGAGAGGAAGAGTTTCCTACATTTTCACTACAAGTGAAGCTGTCGCAGCCGAAGT 1290
Query 1154 AGCCGATCTTTCTCCACTTTTAGCTTTTTCCATCCTCATGAATAGTGTTCAACCCGTTCT 1213
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1291 TGCCGATCTTTCTCCGCTTTTAGCCTTTTCCATCCTCATGAATAGTGTTCAACCCGTTCT 1350
Query 1214 TTCTGGAGTTGCGGTCGGAGCGGGATGGCAAGGATATGTTACTTACGTTAACCTTGCTTG 1273
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1351 CTCTGGAGTTGCCGTCGGAGCTGGATGGCAAGGATATGTTACTTACGTTAACCTTGCTTG 1410
Query 1274 CTATTACCTAGTGGGAATTCCAATTGGTATTATCCTTGGTTACGTCGTTGGTTTGCAAGT 1333
||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1411 CTATTACCTTGTCGGAATTCCTATTGGTATTATCCTTGGTTATGTCGTTGGTTTGCAAGT 1470
Query 1334 GAAAGGTGTATGGATCGGAATGCTCTTTGGAATTTTCGTTCAGACTTGTGTGCTTACCGT 1393
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1471 GAAAGGCGTATGGATCGGAATGCTCTTTGGAATATTCGTTCAGACTTGTGTGCTTACCGT 1530
Query 1394 CATGACTCTGAGAACAGATTGGGATCAACAGGTGTCTACGTCATTGAGACGCTTAAACCG 1453
|||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||
Sbjct 1531 CATGACTCTGAGAACAGATTGGGATCAACAGGTGTCAACGTCGTTGAGACGTTTAAATCG 1590
Query 1454 GTGGGTTGTACCCGAATCTAGAGACGTAAACCAAATTTCATCAGAGGAATAAATT 1508
|||||||||||| ||||||||||||||||||||| | ||||||||||||||||||
Sbjct 1591 GTGGGTTGTACCAGAATCTAGAGACGTAAACCAAGTATCATCAGAGGAATAAATT 1645
> AT1G33100.1 | Symbols: | MATE efflux family protein | chr1:11997683-12001308
FORWARD LENGTH=1476
Length=1476
Score = 1903 bits (1030), Expect = 0.0
Identities = 1342/1492 (90%), Gaps = 23/1492 (2%)
Strand=Plus/Plus
Query 21 ATGGCCGGAGGAGGAGGAGAGCTCACGGCGGCTTTGCTGAATAAGACGGCGGCGAACGGC 80
||||||||| |||||||||||||||||| |||| || |||| ||||| |||| |
Sbjct 1 ATGGCCGGAAGAGGAGGAGAGCTCACGGAGGCTCTGGTGAAAAAGAC--CGGC--A---- 52
Query 81 GGAGAAGAAGAGGATGAGTTAGGGTTGAAGCAAAAGGTTTGGATTGAATCAAAGAAGCTA 140
||||||||||||||||||| ||| ||||| | ||||||||||||||||||||||| ||
Sbjct 53 -GAGAAGAAGAGGATGAGTTGGGGATGAAGGAGAAGGTTTGGATTGAATCAAAGAAACTG 111
Query 141 TGGGTTGTGGCGGCGCCGGCGATCTTCACGAGGTTCTCAACGTTCGGAGTTTCAATAATA 200
||||||||||||||||| ||||||||||| || | ||| ||||||||||||||||| ||
Sbjct 112 TGGGTTGTGGCGGCGCCAGCGATCTTCACAAGATACTCTACGTTCGGAGTTTCAATGGTA 171
Query 201 AGTC-AGTCTTTCATCGGCCATCTTGGTCCTATAGAGTTGGCCGCTTACTCTATCACCTT 259
| || || ||||||| ||||||||||| || | ||||||||||||||||||||||||||
Sbjct 172 ACTCAAG-CTTTCATTGGCCATCTTGGCCCAACCGAGTTGGCCGCTTACTCTATCACCTT 230
Query 260 CACCGTTCTCCTCCGGTTT-AGTAATGGTATCTTGTTAGGTATGGCCAGTGCA-TTGGAA 317
|||| ||||||||| |||| ||||||||||||||||||||||||||| ||||| | || |
Sbjct 231 CACCATTCTCCTCC-GTTTCAGTAATGGTATCTTGTTAGGTATGGCCGGTGCACTAGG-A 288
Query 318 ACACTATGTGGTCAAGCCTACGGAGCTAAACAAAATCATATGCTCGGGATCTACCTCCAA 377
||| |||||||||||||||||||||| |||||| | || |||||||||||||||||||||
Sbjct 289 ACATTATGTGGTCAAGCCTACGGAGCCAAACAATACCAGATGCTCGGGATCTACCTCCAA 348
Query 378 AGGTCATGGATCGTCCTCACAGGTTGTACCATTTGCCTCACGCCCGTCTAT-ATCTTTTC 436
|||||||||||||||||||||||| ||||||||||||||| |||||||| | |||||| |
Sbjct 349 AGGTCATGGATCGTCCTCACAGGTGGTACCATTTGCCTCATGCCCGTCT-TCATCTTTGC 407
Query 437 AGGCCCTATCCTCTTAGCCTTAGGTCAAGAGGAACGCATTGTCCGTGTGGCTCGGATCAT 496
||||||||||||||||| ||||||||||||||||||||||| |||||||||||| || |
Sbjct 408 GGGCCCTATCCTCTTAGCTTTAGGTCAAGAGGAACGCATTGTTCGTGTGGCTCGGGTCTT 467
Query 497 AGCCCTATGGGTCATAGGCATCAACTTCTCCTTTGTGCCTTCCTTCACTTGCCAAATGTT 556
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 468 AGCCCTATGGGTCATAGGCATCAACTTCTCCTTCGTGCCCTCCTTCACTTGCCAAATGTT 527
Query 557 CCTCCAAGCTCAGAGCAAAAACAAGATCATTGCCTACGTGGCTGCTGTCTCCTTAGGGGT 616
||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||| |
Sbjct 528 TCTCCAAGCTCAGAGCAAGAACAAGATTATTTCCTACGTGACTGCTGTCTCCTTAGGGCT 587
Query 617 CCATGTTTTCTTGTCGTGGCTACTTA-TGGTTCATTTCAATTTCGGGATCACTGGTGCTA 675
|||||| ||||| |||||||| || | ||| |||||||||||| |||||||||||||| |
Sbjct 588 CCATGTCTTCTTCTCGTGGCTCCT-AGTGGCTCATTTCAATTTTGGGATCACTGGTGCGA 646
Query 676 TGACCTCTACT-CTAGTTGCGTTCTGGTTGCCTAACATTGCGCAACTCTTGTTTGTCACG 734
||||||||| | ||| |||||||||||||||||| ||||| ||| ||||||| ||| ||
Sbjct 647 TGACCTCTA-TGCTAATTGCGTTCTGGTTGCCTATCATTGTGCAGCTCTTGTATGTAACA 705
Query 735 TGCGGTGGGTGTAAGGACACATGGAGAGGATTCACTATGTTGGCCTTCAAAGATTTATGG 794
|| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||| |||
Sbjct 706 TGTGGTGGATGTAAGGATACATGGAGAGGATTCTCTATGTTGGCCTTCAAAGATTTGTGG 765
Query 795 CCTGTCTTCAAACTATCTCTGTCTTCCGGTGGAATGCTTTGCTTGGAACTATGGTACAAC 854
|| ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 766 CCCGTCTTAAAACTATCTTTGTCTTCCGGTGGAATGCTTTGCTTGGAGTTATGGTACAAC 825
Query 855 TCGATCTTGGTACTGCTCACTGGAAATTTGAAAAACGCAGAAGTGGCTCTTGATGCACTA 914
||| | |||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 826 TCGGTATTGGTATTGCTCACTGGAAATTTGAAAAACGCAGAGGTGGCTCTTGATGCACTA 885
Query 915 GCAATCTGCCTCAACATAAATGGATTGGAGATGATGATAGCACTTGGGTTTTTGGCAGCT 974
||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 886 GCAATCTGCATCAGCATAAATGCACTGGAGATGATGATAGCACTTGGGTTTTTGGCAGCA 945
Query 975 GCAAGTGTAAGAGTCTCCAACGAACTCGGTAGTGGAAACCCCAAAGGAGCCAAGTTTGCA 1034
| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 946 GTAAGTGTAAGAGTGTCCAACGAGCTCGGTAGTGGAAACCCCAAAGGAGCCAAGTTTGCA 1005
Query 1035 ACATTGACAGCGGTTTTCACATCACTATCCATAGGAATGGTTCTATTCTTCATCTTCTTG 1094
||||||| |||||||||||| ||||| || |||||||| |||||||||||| | || |||
Sbjct 1006 ACATTGATAGCGGTTTTCACGTCACTCTCTATAGGAATAGTTCTATTCTTCGTTTTTTTG 1065
Query 1095 TTTCTAAGAGGAAGAGTTTCCTACATTTTCACTACAAGTGAAGCTGTCGCAGCCGAAGTA 1154
||| | || |||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1066 TTTTTGAGGGGAAGAATTTCCTACATTTTCACTACAAGTGAAGCTGTCGCGGCCGAAGTT 1125
Query 1155 GCCGATCTTTCTCCACTTTTAGCTTTTTCCATCCTCATGAATAGTGTTCAACCCGTTCTT 1214
|| |||||||||||||||||||| |||||||||||| |||| ||||||||||| |||||
Sbjct 1126 GCTGATCTTTCTCCACTTTTAGCATTTTCCATCCTCTTGAACAGTGTTCAACCTGTTCTC 1185
Query 1215 TCTGGAGTTGCGGTCGGAGCGGGATGGCAAGGATATGTTACTTACGTTAACCTTGCTTGC 1274
|||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1186 TCTGGAGTGGCAATCGGAGCGGGATGGCAAGGATATGTGGCTTACGTTAACCTTGCTTGC 1245
Query 1275 TATTACCTAGTGGGAATTCCAATTGGTATTATCCTTGGTTACGTCGTTGGTTTGCAAGTG 1334
|||||||| || |||||||| |||||| ||||||||||||| || |||||||||||||||
Sbjct 1246 TATTACCTTGTCGGAATTCCTATTGGTGTTATCCTTGGTTATGTTGTTGGTTTGCAAGTG 1305
Query 1335 AAAGGTGTATGGATCGGAATGCTCTTTGGAATTTTCGTTCAGACTTGTGTGCTTACCGTC 1394
|||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct 1306 AAAGGTGTATGGATAGGAATGCTTTTTGGAATATTCGTTCAGACTTGTGTGCTCACCGTC 1365
Query 1395 ATGACTCTGAGAACAGATTGGGATCAACAGGTGTCTACGTCATTGAGACGCT-TAAACCG 1453
|||||||| ||||||||||||||||||||||| |||||||| |||||| | |||||||
Sbjct 1366 ATGACTCTCAGAACAGATTGGGATCAACAGGTATCTACGTCGTTGAGAAA-TATAAACCG 1424
Query 1454 GTGGGTTGTACCCGAATCTAGAGACGTAAACCAAATTTCATCAGAGGAATAA 1505
|||||||||||| ||||||||||| | ||| |||||||||||||||||||||
Sbjct 1425 GTGGGTTGTACCAGAATCTAGAGATGCAAATCAAATTTCATCAGAGGAATAA 1476
> AT1G33090.1 | Symbols: | MATE efflux family protein | chr1:11993298-11996712
FORWARD LENGTH=1815
Length=1815
Score = 1881 bits (1018), Expect = 0.0
Identities = 1354/1517 (89%), Gaps = 20/1517 (1%)
Strand=Plus/Plus
Query 15 TCCAAGATGGCCGGAGGAGGAGGAGAGCTCACGGCGGCTTTGCTGAATAAGACGGCGGCG 74
|||||||||||||||| ||||||||||||||||||||||||| |||| |||||| | | |
Sbjct 155 TCCAAGATGGCCGGAGAAGGAGGAGAGCTCACGGCGGCTTTGTTGAAAAAGACGACTGAG 214
Query 75 AACGGCGGAGAAGAAGAGGATGAGTTAGGGTTGAAGCAAAAGGTTTGGATTGAATCAAAG 134
||||| ||||||||| | |||||||||||||||||| |||| ||||||||||||||||||
Sbjct 215 AACGGAGGAGAAGAAAATGATGAGTTAGGGTTGAAGGAAAAAGTTTGGATTGAATCAAAG 274
Query 135 AAGCTATGGGTTGTGGCGGCGCCGGCGATCTTCACGAGGTTCTCAACGTTCGGAGTTTCA 194
||||||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||
Sbjct 275 AAGCTATGGGTTGTGGCGGCGCCATCGATCTTCACGAAGTTCTCTACGTACGGAGTTTCA 334
Query 195 ATAATAAGTCA-GTCTTTCATCGGCCATCTTGGTCCTATAGAGTTGGCCGCTTACTCTAT 253
| ||| ||| | |||| | |||||| |||| || | ||||||||||||||||||||
Sbjct 335 TTGGTAACTCAAGGCTTTGTT-GGCCATATTGGCCCAACCGAGTTGGCCGCTTACTCTAT 393
Query 254 CACCTTCACCGTTCTCCTCCGGTTT-AGTAATGGTATCTTGTTAGGTATGGCCAGTGCAT 312
||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 394 CACCTTCACCGTTCTCCTCCG-TTTCAGTAATGGTATCTTGTTAGGTATGGCCAGTGCAC 452
Query 313 T-GGAAACACTATGTGGTCAAGCCTACGGAGCTAAACAAAATCATATGCTCGGGAT-CTA 370
| |||| || |||||||||||||||||||||| |||||| | |||||||||||||| | |
Sbjct 453 TAGGAA-CATTATGTGGTCAAGCCTACGGAGCCAAACAATACCATATGCTCGGGATTC-A 510
Query 371 CCTCCAAAGGTCATGGATCGTCCTCACAGGTTGTACCATTTGCCTCACGCCCGTCTAT-A 429
|||||||||||||||||||||||| |||||||||||||||||| ||| |||| ||| | |
Sbjct 511 CCTCCAAAGGTCATGGATCGTCCTTACAGGTTGTACCATTTGCATCATGCCCATCT-TCA 569
Query 430 TCTTTTCAGGCCCTATCCTCTTAGCCTTAGGTCAAGAGGAACGCATTGTCCGTGTGGCTC 489
||||||||||||| |||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct 570 TCTTTTCAGGCCCGATCCTCTTAGCCTTAGGTCAAGAGGACCACATTGTTCGTGTGGCTC 629
Query 490 GGATCATAGCCCTATGGGTCATAGGCATCAACTTCTCCTTTGTGCCTTCCTTCACTTGCC 549
|| |||||||||||||| |||||| |||||||||| |||| || || ||||||||||||
Sbjct 630 GGGTCATAGCCCTATGGCTCATAGCCATCAACTTCACCTTCGTACCCGCCTTCACTTGCC 689
Query 550 AAATGTTCCTCCAAGCTCAGAGCAAAAACAAGATCATTGCCTACGTGGCTGCTGTCTCCT 609
|||| ||||||||| |||||||||| ||||||||||| ||||||||| ||||||| |||
Sbjct 690 AAATATTCCTCCAATCTCAGAGCAAGAACAAGATCATCGCCTACGTGTCTGCTGTAACCT 749
Query 610 TAGGGGTCCATGTTTTCTTGTCGTGGCTACTTA-TGGTTCATTTCAATTTCGGGATCACT 668
||||| ||||||||||||| |||||||| || | ||||||||||||||||||||||||||
Sbjct 750 TAGGGCTCCATGTTTTCTTCTCGTGGCTCCT-AGTGGTTCATTTCAATTTCGGGATCACT 808
Query 669 GGTGCTATGACCTCTACTCTAGTTGCGTTCTGGTTGCCTAACATTGCGCAACTCTTGTTT 728
||||| ||||||||||| ||||||||||||||| |||||||||||| ||| ||||||| |
Sbjct 809 GGTGCAATGACCTCTACGCTAGTTGCGTTCTGGATGCCTAACATTGTGCAGCTCTTGTAT 868
Query 729 GTCACGTGCGGTGGGTGTAAGGACACATGGAGAGGATTCACTATGTTGGCCTTCAAAGAT 788
||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 869 GTCACATCCGGTGGGTGTAAGGATACATGGAGAGGATTCACTATGTTGGCCTTCAAAGAT 928
Query 789 TTATGGCCTGTCTTCAAACTATCTCTGTCTTCCGGTGGAATGCTTTGCTTGGAACTATGG 848
|||||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||||
Sbjct 929 TTATGGCCCGTCTTCAAACTATCTTTGTCTTCCGGTGGAATGGTTTGCTTGGAGTTATGG 988
Query 849 TACAACTCGATCTTGGTACTGCTCACTGGAAATTTGAAAAACGCAGAAGTGGCTCTTGAT 908
||||||||||| || ||| |||||||||| ||||||||||||||||| ||||| |||||
Sbjct 989 TACAACTCGATATTAGTATTGCTCACTGGGAATTTGAAAAACGCAGAGGTGGCGATTGAT 1048
Query 909 GCACTAGCAATCTGCCTCAACATAAATGGATTGGAGATGATGATAGCACTTGGGTTTTTG 968
||||||||||||||| ||||| |||||| | || ||||||||||||||||||||||||||
Sbjct 1049 GCACTAGCAATCTGCATCAACGTAAATGCACTGCAGATGATGATAGCACTTGGGTTTTTG 1108
Query 969 GCAGCTGCAAGTGTAAGAGTCTCCAACGAACTCGGTAGTGGAAACCCCAAAGGAGCCAAG 1028
||||| | |||||||||||| |||||||| |||||||| ||||||||| |||| |||||
Sbjct 1109 GCAGCAGTAAGTGTAAGAGTGTCCAACGAGCTCGGTAGGGGAAACCCCGAAGGCGCCAAA 1168
Query 1029 TTTGCAACATT-GACAGCGGTTTTCACATCACTATCCATAGGAATGGTTCTATTCTTCAT 1087
||||||||| | | |||||||||||| ||||| || |||||| | |||||||||||| |
Sbjct 1169 TTTGCAACAATCGT-AGCGGTTTTCACGTCACTCTCTATAGGATTAGTTCTATTCTTCGT 1227
Query 1088 CTTCTTGTTTCTAAGAGGAAGAGTTTCCTACATTTTCACTACAAGTGAAGCTGTCGCAGC 1147
||||||||||||||| |||||| |||| |||||||||||||||||||||||||| |||||
Sbjct 1228 CTTCTTGTTTCTAAGGGGAAGAATTTCGTACATTTTCACTACAAGTGAAGCTGTGGCAGC 1287
Query 1148 CGAAGTAGCCGATCTTTCTCCACTTTTAGCTTTTTCCATCCTCATGAATAGTGTTCAACC 1207
|||||| || |||||||||||||||||||| |||||||||||| |||| |||||||||||
Sbjct 1288 CGAAGTCGCTGATCTTTCTCCACTTTTAGCATTTTCCATCCTCTTGAACAGTGTTCAACC 1347
Query 1208 CGTTCTTTCTGGAGTTGCGGTCGGAGCGGGATGGCAAGGATATGTTACTTACGTTAACCT 1267
|||||| || ||||| || || ||||||||||||||||||||||| ||||| |||||||
Sbjct 1348 CGTTCTCTCAGGAGTGGCAGTGGGAGCGGGATGGCAAGGATATGTGGCTTACATTAACCT 1407
Query 1268 TGCTTGCTATTACCTAGTGGGAATTCCAATTGGTATTATCCTTGGTTACGTCGTTGGTTT 1327
||||||||||||||| | |||||||| ||||| || ||||||||||||| ||||||||
Sbjct 1408 TGCTTGCTATTACCTTCTCGGAATTCCTGTTGGTCTTGTCCTTGGTTACGTTGTTGGTTT 1467
Query 1328 GCAAGTGAAAGGTGTATGGATCGGAATGCTCTTTGGAAT-TTTCGTTCAGACTTGTGTGC 1386
|||||| |||||||||||||| |||||||| |||||||| ||| ||||||||||||||||
Sbjct 1468 GCAAGTCAAAGGTGTATGGATAGGAATGCTTTTTGGAATATTT-GTTCAGACTTGTGTGC 1526
Query 1387 TTACCGTCATGACTCTGAGAACAGATTGGGATCAACAGGTGTCTACGTCATTGAGACGCT 1446
||||| |||||||||| ||||||||||||||||||||||| |||||||| |||| | |
Sbjct 1527 TTACCATCATGACTCTCAGAACAGATTGGGATCAACAGGTATCTACGTCGTTGAAAAA-T 1585
Query 1447 -TAAACCGGTGGGTTGTACCCGAATCTAGAGACGTAAACCAAATTTCATCAGAGGAATAA 1505
||||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||
Sbjct 1586 ATAAACCGGTGGGTTGTACCAGAATCTAGAGATGCAAATCAAATTTCATCAGAGGAATAA 1645
Query 1506 ATTAATTTTGATATATG 1522
|| ||| ||| ||||
Sbjct 1646 -TTCGTTTGGAT-TATG 1660
> AT1G33080.1 | Symbols: | MATE efflux family protein | chr1:11985707-11990482
FORWARD LENGTH=1685
Length=1685
Score = 1406 bits (761), Expect = 0.0
Identities = 1219/1437 (85%), Gaps = 44/1437 (3%)
Strand=Plus/Plus
Query 57 CTGAATAAGACGGCGGCGAA-CGGCGGAGAAGA-AGAGGATGAGTTAGGGTTGAAGCAAA 114
||||| ||| || ||| ||| | |||||||||| | ||||| ||||||| ||||| | |
Sbjct 82 CTGAAAAAGTCGACGGAGAATC-GCGGAGAAGATCG-GGATGGGTTAGGGATGAAGGAGA 139
Query 115 AGGTTTGGATTGAATC-AAAGAAGCTATGGGTTGTGGC-GGCGCCGGCGATCTTCACGAG 172
||||||||| ||||| ||| ||||||||||||||||| || |||||||||||| |||||
Sbjct 140 AGGTTTGGAGGGAATCTAAA-AAGCTATGGGTTGTGGCTGG-GCCGGCGATCTTTACGAG 197
Query 173 GTTCTCAACGTTCGGAGTTTCAATAATAAGTC-AGTCTTTCATCGGCCATCTTGGTC-CT 230
|||||| |||| |||| | || | ||||||| || ||||||| ||||||||||| | ||
Sbjct 198 GTTCTCCACGTCCGGACTATCTTTGATAAGTCAAG-CTTTCATTGGCCATCTTGG-CTCT 255
Query 231 ATAGAGTTGGCCGCTTACTCTATCACCT-TCACCGTTCTCCTCCGGTTTAGTAATGGTAT 289
| ||||||||||||||||| |||| || |||||||||||||||| ||||||||||||||
Sbjct 256 ACCGAGTTGGCCGCTTACTCCATCA-CTCTCACCGTTCTCCTCCGTTTTAGTAATGGTAT 314
Query 290 CTTGTTAGGTATGGCCAGTGCATTGGAAACACTATGTGGTCAAGCCTACGGAGCTAAACA 349
||||||||| ||||| ||||| | ||||||||||||||||||||||| ||||| |||||
Sbjct 315 CTTGTTAGGCATGGCTAGTGCGCTAGAAACACTATGTGGTCAAGCCTATGGAGCAAAACA 374
Query 350 AAATCATATGCTCGGGATCTACCTCCAAAGGTCATGGATCGTCCTCACAGGTTGTACCAT 409
| |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 375 ATATCATATGCTTGGGATCTACCTCCAAAGATCATGGATCGTCCTCACAGGCTGTACCAT 434
Query 410 TTGCCTCACGCCCGTCTATATCTTTTCAGGCCCTATCCTCTTAGCCTTAGGTCAAGAGGA 469
|||||| | |||| |||| |||||| |||||||||| ||||| || ||||||||||||||
Sbjct 435 TTGCCTTATGCCCATCTACATCTTTGCAGGCCCTATTCTCTTGGCTTTAGGTCAAGAGGA 494
Query 470 ACGCATTGTCCGTGTGGCTCGGATCATAGCCCTATGGGTCATAGGCATCAACTTCTCCTT 529
|||| |||| |||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 495 ACGCCTTGTTCGTGTGGCTCGGATCATAGCTCTATGGGTCATAGGCATCAACATCTCCTT 554
Query 530 TGTGCCTTCCTTCACTTGCCAAATGTTCCTCCAAGCTCAGAGCAAAAACAAGATCATTGC 589
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct 555 TGTGCCTTCCTTCACTTGCCAAATGTTCCTCCAAGCTCAGAGTAAGAACAAGATCATCGC 614
Query 590 CTACGTGGCTGCTGTCTCCTTAGGGGTCCATGTTTTCTTGTCGTGGCTACTTA-TGGTTC 648
|||||| |||||||| || ||||| |||||||| |||||||||||||| || | ||||||
Sbjct 615 CTACGTTGCTGCTGTTTCGTTAGGAGTCCATGTCTTCTTGTCGTGGCTTCT-AGTGGTTC 673
Query 649 ATTTCAATTTCGGGATCACTGGTGCTATGACCTCTACTCTAGTTGCGT-TCTGGTTGCCT 707
|||| ||||||||||| ||||||| ||||||||| | || || || | |||||||||
Sbjct 674 ATTTTGATTTCGGGATCGCTGGTGCCATGACCTCTTCGCTCGTAGCACAT-TGGTTGCCT 732
Query 708 AACATTGCGCAACTCTTGTTTGTCACGTGCGGTGGGTGTAAGGACACATGGAGAGGATTC 767
||||||||||| | || |||||||| |||||||| |||| ||| || ||||||||||||
Sbjct 733 AACATTGCGCAGGTTTTATTTGTCACATGCGGTGGATGTACGGAAACGTGGAGAGGATTC 792
Query 768 ACTATG-TTGGCCTTCAAAGAT-TTATGGCCTGTCTTCAAACTATCTCTGTCTTCCGGTG 825
|| || ||||| ||||| ||| || ||||| || || ||||||||| | ||||||||||
Sbjct 793 TCT-TGGTTGGCTTTCAAGGATCTT-TGGCCCGTTTTTAAACTATCTGTATCTTCCGGTG 850
Query 826 GAATGCTTTGCTTGGAACTATGGTACAACTCGATCTTGGTACTGCTCACTGGAAATTTGA 885
| ||| |||||||||| ||||||||||||||||||||| | |||||||| ||||| ||||
Sbjct 851 GCATGATTTGCTTGGAGCTATGGTACAACTCGATCTTGATTCTGCTCACGGGAAACTTGA 910
Query 886 AAAACGCAGAAGTGGCTCTTGATGCACTAGCAATCTGCCTCAACATAAATGGATTGGAGA 945
||||||| || || |||||| | ||||| ||||||||| |||| ||||||| | ||||||
Sbjct 911 AAAACGCTGAGGTTGCTCTTAACGCACTTGCAATCTGCATCAATATAAATGCACTGGAGA 970
Query 946 TGATGATAGCACTTGGGTTTT-TGGCAGCTGCAAGTGTAAGAGTCTCCAACGA-ACTCGG 1003
||||| |||| ||| || || ||||||| |||||||||||||| || ||||| | ||||
Sbjct 971 TGATGGTAGC-CTTCGGCTTCATGGCAGCAGCAAGTGTAAGAGTTTCAAACGAGA-TCGG 1028
Query 1004 TAGTGGAAACCCCAAAGGAGCCAAGTTTGCAACATTGACAGCGGTTTTC-ACATCACTAT 1062
||||| || | || |||||||| ||||||||| || | ||||| | |||||||| |
Sbjct 1029 GAGTGGGAATTCTAATGGAGCCAAATTTGCAACAATGGTTGTGGTTT-CGACATCACTTT 1087
Query 1063 CCATAGGAATGGTTCTA-TTCTTCATCTTCTTGTTTCTAAGAGGAAGAGTTTCCTACATT 1121
| |||||||| | || ||||| |||||| ||||| |||||| ||| ||||| ||||||
Sbjct 1088 CGATAGGAATCAT-CTTCTTCTTTATCTTCCTGTTTTTAAGAGAAAGGGTTTCATACATT 1146
Query 1122 TTCACTACAAGTGAAGCTGTCGC-AGC-CGAAGTAGCCGATCTTTCTCCACTTTTAGCTT 1179
|| || |||||||||||||| || | | | |||||||||||||||||||||| || || |
Sbjct 1147 TTTACAACAAGTGAAGCTGTTGCCA-CAC-AAGTAGCCGATCTTTCTCCACTCTTGGCCT 1204
Query 1180 TTTCCATCCTCATGAATAGTGTTCAACCCGTTCTTTCTGGAGTTGCGGTCGGAGCGGGAT 1239
| ||||| ||| |||| ||| ||||||| ||||| ||||||||||| || ||||||||||
Sbjct 1205 TCTCCATTCTCTTGAACAGTATTCAACCAGTTCTCTCTGGAGTTGCTGTTGGAGCGGGAT 1264
Query 1240 GGCAAGGA-TATGTTACT-TACGTTAACCTTGCTTGCTATTACCTAGTGGGAATTCCAAT 1297
|||| | | |||||||| | |||||||||||||||||||||||| || |||||||| |
Sbjct 1265 GGCA-GAAATATGTTACGGT-CGTTAACCTTGCTTGCTATTACCTTGTTGGAATTCC--T 1320
Query 1298 T--GGTATTATCCTTGGTTACGTCGTTGGTTTGCAAGTGAAAGGTGTATGGATCGGAATG 1355
| ||| || | ||||| || ||||||||||| ||||| |||||||| ||| | ||||||
Sbjct 1321 TCCGGTCTTTTTCTTGGCTATGTCGTTGGTTTACAAGTCAAAGGTGTTTGGTTAGGAATG 1380
Query 1356 CTCTTT-GGAATTTTCGTTCAGACTTGTGTGCTTACCGTCATGACTCTGAGAACAGATTG 1414
| ||| ||||| |||||||||||||| |||||||| || |||||| |||||||||| ||
Sbjct 1381 AT-TTTCGGAATCTTCGTTCAGACTTGCGTGCTTACAGTAATGACTATGAGAACAGACTG 1439
Query 1415 GGATCAACAGGTGTCTACGTCATTGAGACGCTTAAACCGGTGGGTTGTACCCGAATC 1471
|||||||||||||||| |||| |||| ||| || ||||| ||||||| ||| |||||
Sbjct 1440 GGATCAACAGGTGTCTTCGTCGTTGAAACGTTTGAACCGTTGGGTTGAACCAGAATC 1496
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75250616955
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5