BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922543 Length=208 Score E Sequences producing significant alignments: (Bits) Value AT1G34245.1 | Symbols: EPF2 | Putative membrane lipoprotein | c... 272 8e-73 > AT1G34245.1 | Symbols: EPF2 | Putative membrane lipoprotein | chr1:12472868-12473754 FORWARD LENGTH=608 Length=608 Score = 272 bits (147), Expect = 8e-73 Identities = 170/180 (94%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 3 aaaaaaaGGATTA-AAACCATGACGAAGTTTGTACGCAAGT-TCATGTTTTGCCTCGTCC 60 ||||||| ||||| ||| ||||||||||||||||||||||| | |||||||||||||||| Sbjct 105 AAAAAAAAGATTATAAA-CATGACGAAGTTTGTACGCAAGTAT-ATGTTTTGCCTCGTCC 162 Query 61 TAGTCTTCGCCGCGTGTTCTTTGGTCGTTAACTCCATTCGCACGCCGCCACTAAAAATCA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 163 TAGTCTTCGCCGCGTGTTCTTTGGTCGTTAACTCCATTCGCACGCCGCCACTAAAAAACA 222 Query 121 CGGTCAATGGCGGACAAAAGAAAAACGCCGATGTAGAACAAGCTCAAAC-CGACCACAAG 179 |||||||||||||| ||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 223 CGGTCAATGGCGGAGAAAAGAAAAACGCCGATATAGAACAAGCTCAAACGC-ACCACAAG 281 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9305749935 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5