BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923116 Length=499 Score E Sequences producing significant alignments: (Bits) Value AT1G47960.1 | Symbols: C/VIF1, ATC/VIF1 | cell wall / vacuolar ... 736 0.0 > AT1G47960.1 | Symbols: C/VIF1, ATC/VIF1 | cell wall / vacuolar inhibitor of fructosidase 1 | chr1:17681157-17683629 REVERSE LENGTH=1528 Length=1528 Score = 736 bits (398), Expect = 0.0 Identities = 433/450 (96%), Gaps = 2/450 (0%) Strand=Plus/Plus Query 13 tgatgatgatggtgatggtgatggtgagtgaAGGAAGTATAATAGAG-CAGACATGTAAA 71 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 148 TGATGATGATGGTGATGGTGATGGTGAGTGAAGGAAGTATAATAGAGCCA-ACATGTAAA 206 Query 72 GAGACACCAGACTTCAATCTTTGTGTGTCTCTCCTTAACTCCGATCCACGTGGTTCCTCT 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207 GAGACACCAGACTTCAATCTTTGTGTGTCTCTCCTTAACTCCGATCCACGTGGTTCCTCT 266 Query 132 GCCGACACTTCTGGCCTCGCTCTCATCCTCATTGATAAAATCAAGGGACTGACAACAAAA 191 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 267 GCCGACACTTCTGGCCTCGCTCTCATCCTCATTGATAAAATCAAGGGCCTGGCAACAAAA 326 Query 192 ACCTTGAACGAGATCAACGGTCTATATAAGAAGAGACCAGAACTAAAACGGGCTTTGGAC 251 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 327 ACTTTGAACGAGATCAACGGTCTATATAAGAAGAGACCAGAACTAAAACGGGCTTTGGAT 386 Query 252 GAATGTAGTCGGAGATACAAAACGATCTTATACGCTGATGTTCCCGAAGCCATTGAAGCT 311 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 387 GAATGTAGTCGAAGATACAAAACGATCTTAAACGCTGATGTTCCCGAAGCCATTGAAGCT 446 Query 312 ATTTCTAAAGGAGTTCCGAAATTCGGCGAAGATGGTGTGATCGACGCCGGTGTCGAAGCT 371 || ||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 447 ATCTCTAAAGGAGTCCCCAAATTCGGCGAAGACGGTGTGATCGACGCCGGTGTCGAAGCT 506 Query 372 TCTGTTTGTGAAGGAGGGTTTAAAGGGAAATCTCCGTTGACTAGTTTGACCAAATCAATG 431 ||||||||| ||||||||||||| |||| |||||||||||||||||||| ||||||||| Sbjct 507 TCTGTTTGTCAAGGAGGGTTTAATGGGAGTTCTCCGTTGACTAGTTTGACTAAATCAATG 566 Query 432 CAAAAAATCTCTAATGTGACTAGAGCCATT 461 |||||||||||||||||||||||||||||| Sbjct 567 CAAAAAATCTCTAATGTGACTAGAGCCATT 596 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23810985678 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5