BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg923384
Length=3272
Score E
Sequences producing significant alignments: (Bits) Value
AT1G49630.1 | Symbols: ATPREP2, PREP2 | presequence protease 2 ... 5155 0.0
AT3G19170.1 | Symbols: ATPREP1, ATZNMP, PREP1 | presequence pro... 3520 0.0
> AT1G49630.1 | Symbols: ATPREP2, PREP2 | presequence protease
2 | chr1:18367594-18375381 REVERSE LENGTH=3582
Length=3582
Score = 5155 bits (2791), Expect = 0.0
Identities = 3114/3270 (95%), Gaps = 22/3270 (1%)
Strand=Plus/Plus
Query 20 CATGCTCCGGTCAATAACTTGTTCCTC-ATCCCTTGCTTCGACCTCTCTCTTCTTCCGCT 78
||||||||||||| ||||||||||||| | || || |||||||||||||||||||||||
Sbjct 45 CATGCTCCGGTCATTAACTTGTTCCTCGA-CCATTACTTCGACCTCTCTCTTCTTCCGC- 102
Query 79 TCTTT-CGCCAGTC-CCCTCGCTCTTACTTTTCGCCGTCATCGTCTTCGACCG-C--C-- 131
||||| |||||| | ||||||||||||||| || || |||||||| |||||| | |
Sbjct 103 TCTTTCCGCCAG-CTCCCTCGCTCTTACTTGTCTCCCTCATCGTCAACGACCGTCGTCGG 161
Query 132 -G--T-CGGCCGCAACATTCGCCGGCTTTCTACTCCAGAAGCTGCTGGAAGTCGTTTCTT 187
| | ||||||||||||||||||||||||||||| |||||||||||| || || | ||
Sbjct 162 TGCCTCCGGCCGCAACATTCGCCGGCTTTCTACTCTAGAAGCTGCTGGGAGACGGCTATT 221
Query 188 TCTACCCCGTGACTTTAAACTGCGCTCCGGTGCGAGTCGTGGTCTCAATGGACAGTTCTC 247
||||| || | ||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct 222 TCTACGACGAGGCTTGAAACTACTCTCCGCCGCGAGTCGTGGTCTCAATGGACAGTTCTC 281
Query 248 TCGCTTATCCATTCGCGCCGTCGCTACACAATCCGCACCTTCTTCAAT-TCCCGGTCAAG 306
||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 282 TCGCTTATCTATTCGCGCCGTCGCTACACAATCCGCACCTTCTTC-TTATCCCGGTCAAG 340
Query 307 ATGAAGCTGAGAAGCTTGGATTTGAGAAAGTCTCTGAAGAGTTTATCTCAGAGTGTAAAT 366
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 ATGAGGCTGAGAAGCTTGGATTTGAGAAAGTCTCTGAAGAGTTTATCTCAGAGTGTAAAT 400
Query 367 CTAAGGCTGTTCTCTTCAGACACAAGAAAACCGGTTGCGAGGTGATGTCTGTTTCAAACG 426
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||
Sbjct 401 CTAAGGCTGTTCTCTTCAAACACAAGAAAACTGGTTGCGAGGTGATGTCTGTTTCTAACG 460
Query 427 ATGATGAGAACAAGGTGTTTGGCATTGTTTTCAGGACTCCTCCGAAAGATTCCACTGGCA 486
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 461 ATGATGAGAACAAGGTGTTTGGCATTGTTTTCAGGACTCCTCCGAAGGATTCCACTGGCA 520
Query 487 TTCCTCACATACTGGAACATAGCGTATTATGTGGGTCAAGAAAGTACCCGCTGAAGGAAC 546
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 521 TTCCTCACATACTGGAACATAGCGTATTATGTGGGTCAAGAAAGTACCCGATGAAAGAAC 580
Query 547 CATTTGTCGAATTATTAAAGGGAAGTTTGCATACTTTCCTTAATGCATTCACATATCCTG 606
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 581 CATTTGTCGAATTATTAAAGGGAAGTTTGCATACTTTCCTAAACGCATTCACATATCCTG 640
Query 607 ATAGGACTTGCTACCCAGTTGCTTCCACAAATACAAAGGATTTCTACAACCTTGTCGATG 666
|||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 641 ATAGGACTTGTTACCCAGTTGCTTCCACAAATAAAAAGGATTTCTACAATCTTGTCGATG 700
Query 667 TATACTTGGATGCTGTGTTCTTCCCCAAGTGTGTGGATGACGTTCACACTTTTCAGCAGG 726
|||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 701 TATACTTGGACGCTGTATTCTTCCCCAAGTGTGTGGATGATGTTCACACTTTTCAGCAGG 760
Query 727 AGGGTTGGCACTATGAGCTTAACGATCCTTCAGAAGACATATCTTACAAAGGCGTTGTTT 786
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 761 AGGGTTGGCATTATGAGCTTAACGATCCTTCAGAGGACATATCTTACAAAGGCGTTGTTT 820
Query 787 TTAATGAGATGAAAGGTGTCTATTCACAACCTGATAATATACTAGGGCGGATTACTCAAC 846
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 821 TTAATGAGATGAAAGGTGTCTATTCACAGCCTGATAATATACTAGGGCGGGTTACTCAAC 880
Query 847 AGGCCTTATGCCCGGAAAATACATACGGTGTTGACAGTGGAGGTGATCCAAAAGATATCC 906
|||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 881 AGGCATTATGTCCAGAAAATACATACGGTGTTGACAGTGGAGGTGATCCAAAAGATATCC 940
Query 907 CTAATCTTACGTTTGAGGAATTTAAGGAGTTCCACCGTCAATATTATCACCCAAACAATG 966
| || |||||||| ||| |||||||||||||||||||||| ||||||||||| | |||||
Sbjct 941 CCAAGCTTACGTTCGAGAAATTTAAGGAGTTCCACCGTCAGTATTATCACCCTAGCAATG 1000
Query 967 CCAGGATATGGTTCTATGGAGATGATGATCCAGTTCACCGCC-TCTGCGTCTTGAGTGAA 1025
||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||
Sbjct 1001 CCAGGATATGGTTCTATGGAGATGACGATCCAGTTCACCGCCTTC-GCGTCTTGAGTGAA 1059
Query 1026 TACTTGAACATGTTTGATGCAAGTCCAGCTCGTGATAGTTCAAAGGTTGAACCACAAAAG 1085
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1060 TACTTGGACATGTTTGATGCAAGTCCAGCTCGAGATAGTTCAAAGGTTGAACCACAAAAG 1119
Query 1086 CTATTCTCTGGGCCTCGCAGAATTGTTGAAAAATATCCTGCTGGTGAAGATGGCGACCTT 1145
|| |||||| | ||||| || |||||||||||||| ||||||||||||||||| ||||||
Sbjct 1120 CTTTTCTCTAGACCTCGTAGGATTGTTGAAAAATACCCTGCTGGTGAAGATGGTGACCTT 1179
Query 1146 AAGAAGAAACGTATGGTGTGCCTTAACTGGCTGCTCTCTGACAAGCCACTGGACTTGCAA 1205
|||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1180 AAGAAGAAGCATATGGTGTGCCTTAACTGGCTTCTCTCTGACAAGCCACTGGACTTACAA 1239
Query 1206 ACTCAACTCGCGCTTGGGTTTTTGGATCATCTTATGCTTGGGACTCCTGCTTCCCCATTG 1265
||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1240 ACTCAACTCGCACTTGGGTTTTTGGATCATCTAATGCTTGGGACTCCTGCCTCCCCATTG 1299
Query 1266 AGAAAAATCTTATTGGAAAGCGGATTAGGAGAAGCTCTTGTTAATAGTGGGATGGAAGAT 1325
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1300 AGAAAAATCTTATTGGAAAGCGGTTTAGGAGAAGCTCTTGTTAATAGTGGGATGGAAGAT 1359
Query 1326 GAACTTCTCCAGCCCCAATTCAGTATAGGTTTGAAAGGTGTTTCCGATGATAATGTCCAA 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 GAACTTCTCCAGCCCCAATTCAGTATAGGTTTGAAAGGTGTTTCCGATGATAATGTCCAA 1419
Query 1386 AAGGTTGAAGACTTGGTCATGAATACTCTGAGAAACTTGGCAGATGAGGGGTTTGACACT 1445
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1420 AAAGTTGAAGAGTTGGTCATGAATACTCTGAGAAAGTTGGCAGATGAGGGGTTTGACACT 1479
Query 1446 GATGCTGTTGAGGCATCTATGAATACCATTGAGTTTTCTCTGAGAGAAAACAATACAGGG 1505
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 GATGCTGTTGAAGCATCCATGAATACCATTGAGTTTTCTCTGAGAGAAAACAATACAGGG 1539
Query 1506 TCTTTCCCTCGTGGTTTATCACTTATGCTTCAATCAATTGCGAAATGGATATACGACATG 1565
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1540 TCGTCCCCTCGTGGTTTATCACTTATGCTTCAATCAATTGCGAAATGGATATACGACATG 1599
Query 1566 GATCCTTTTGAGCCATTAAAGTATGAGGAATCATTGAAGTCCCTGAAAGCTAGAATAGCT 1625
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1600 GATCCTTTTGAGCCATTAAAGTATGAGGAACCATTGAAGTCCCTGAAAGCTAGAATAGCT 1659
Query 1626 GAGAAAGGATCTAAGGCTGTCTTTTCCCCTCTGATAGAGGAGTTTATTTTGAACAACCCT 1685
||||||||||| ||| |||||||||| || ||||||||||||| ||||||||||||||||
Sbjct 1660 GAGAAAGGATCCAAGTCTGTCTTTTCTCCGCTGATAGAGGAGTATATTTTGAACAACCCT 1719
Query 1686 CATTGTGTTACTATCGAGATGCAGCCTGATCCAGAGAAAGCTTCTCAAGAGGAAGCGGAG 1745
|||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 1720 CATTGTGTTACTATAGAGATGCAGCCTGATCCAGAAAAAGCTTCTCTAGAGGAAGCGGAG 1779
Query 1746 GAGAAAATTATTCTAGAAAAAGTTAAAGCAAGTATGACAGAAGAGGATCTTGCAGAACTA 1805
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1780 GAGAAAAGTATTCTAGAAAAAGTTAAAGCAAGTATGACAGAAGAGGATCTTACAGAACTA 1839
Query 1806 GCGCGTGCCACAGAGGAGTTGAAATTGAAGCAAGAGACTCCTGACCCTCCTGAAGCACTG 1865
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 1840 GCGCGTGCCACAGAGGAGTTGAGATTGAAGCAAGAGACTCCTGACCCTCCTGACGCACTG 1899
Query 1866 AAATGCGTTCCAAGTTTAAACTTGAGTGACATTCCAAAAGAACCTATATATGTTCCCACT 1925
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1900 AAATGCGTTCCAAGTTTAAATTTGAGTGACATTCCAAAAGAACCTATATATGTTCCCACT 1959
Query 1926 GAGGTTGGAGATATTAATGGCGTGAAGGTTTTGCGGCATGATCTCTTTACAAATGATATA 1985
||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||
Sbjct 1960 GAGGTTGGAGATATTAATGGCGTGAAGGTGTTGCGGAATGATCTCTTTACAAATAATATA 2019
Query 1986 CTCTACACTGAAGTAGTCTTTGATATGGGCTCACTAAAACATGAGCTTCTTCAACTGATA 2045
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 2020 CTCTACACTGAAGTAGTCTTTGATATGGGCTCAGTAAAGCATGAGCTTCTTCAACTGATA 2079
Query 2046 CCTCTCTTCTGTCAATCATTACTAGAGATGGGCACGCAAGATTTGACTTTTGTACAACTT 2105
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2080 CCCCTCTTCTGTCAATCATTACTAGAGATGGGCACGCAAGATTTGACTTTTGTACAACTT 2139
Query 2106 AATCAGTTAATTGGAAGAAAGACCGGAGGGATATCAGTTTATCCCCTTACATCCTCTGTG 2165
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2140 AATCAGTTAATTGGAAGAAAGACAGGAGGGATATCAGTTTATCCCCTTACATCCTCTGTG 2199
Query 2166 TATGGTAGGGATGATCCATGTAGCAAAATTATTGTGCGTGGAAAATCCATGGTTGGACGC 2225
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2200 TATGGTAGGGATGATCCATGTAGCAAAATCATTGTGCGTGGAAAATCCATGGTTGGACGC 2259
Query 2226 GCTGAAGACCTTTTCAACCTGATGAACTGTGTGCTGCAAGAGGTTCGATTTACAGATAAA 2285
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||
Sbjct 2260 GCTGAAGACCTTTTCAATTTGATGAACTGTGTGCTGCAAGAGGTTCGATTTACCGATCAA 2319
Query 2286 CAACGGTTTAAACAATTCGTCTCTCAGAGTAGAGCACGAATGGAGAACCGATTGAGGGGA 2345
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2320 CAGCGGTTTAAACAATTCGTTTCTCAGAGTAGAGCACGAATGGAGAACCGATTGAGGGGA 2379
Query 2346 AGTGGTCAAGGAATTGCTGCTGCGAGGATGGATGCAATGTTGAACGTTGCTGGATGGATG 2405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2380 AGTGGTCAAGGAATTGCTGCTGCGAGGATGGATGCAATGTTGAACGTTGCTGGATGGATG 2439
Query 2406 TCTGAACAGATGGGTGGTCTCAGTTACCTTGAATTTCTACACACCCTTGAACAGAAGGTG 2465
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2440 TCTGAACAGATGGGTGGTCTCAGTTACCTTGAATTTCTACACACTCTTGAACAGAAGGTG 2499
Query 2466 GATCAAGACTGGGAAGGAATTTCATCCTCACTTGAGGAAATCAGAAGATCTTTCCTTTCC 2525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2500 GATCAAGACTGGGAAGGAATTTCATCCTCACTTGAGGAAATCAGAAGATCTTTCCTTTCC 2559
Query 2526 AGGAATGGTTGCATAGTTAATATGACTGCTGATGGGAAGTCCCTCACAAACACGGAAAAA 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2560 AGGAATGGTTGCATAGTTAATATGACTGCTGATGGGAAGTCCCTCACAAACACGGAAAAA 2619
Query 2586 TATGTTGGAAAATTTCTTGATTTACTCCCTGAAAATCCATCTGGTGGACTCGTCACTTGG 2645
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 2620 TATGTTGGAAAATTTCTTGATTTACTCCCTGAAAATCCGTCTGGTGAACTCGTCACTTGG 2679
Query 2646 GATGCACGACTTCCTTTGAGAAATGAAGCAATTGTGATACCAACCCAGGTGAACTATGTT 2705
||||| ||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct 2680 GATGCTCGACTTCCTTTGAGAAATGAAGCTATAGTAATACCAACCCAGGTGAACTATGTG 2739
Query 2706 GGAAAAGCGGGAAATATATACAGCAGTGGCTACGAGCTTGATGGAAGTTCATATGTTATA 2765
||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||
Sbjct 2740 GGAAAAGCGGGAAATATATACAGCAGTGGCTACAAACTTGATGGGAGTTCATATGTTATA 2799
Query 2766 TCAAAGCATATTAGTAACACATGGTTATGGGATCGTGTCCGTGTAAGTGGTGGTGCATAT 2825
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2800 TCAAAGCATATTAGTAACACATGGTTATGGGATCGTGTTCGTGTAAGTGGTGGTGCATAT 2859
Query 2826 GGAGGTTTCTGTGATTTTGATTCACATTCGGGAGTATTTTCGTTCTTATCTTACCGTGAT 2885
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2860 GGAGGTTCCTGTGATTTTGATTCACATTCGGGAGTATTTTCGTTCTTATCTTACCGTGAT 2919
Query 2886 CCCAACCTATTAAAGACTCTGGACATATATGATGGAACTGGGGATTTCTTACGTGGCCTC 2945
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2920 CCCAACCTATTAAAGACTCTAGACATATATGATGGAACTGGGGATTTCTTACGTGGCCTC 2979
Query 2946 GATGTCGATGAAGACACCCTTACTAAAGCAATTATTGGGACAATTGGCGATGTTGATTCA 3005
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 2980 GATGTCGATGAAGACACCCTTACCAAAGCAATTATTGGGACAATTGGCGATGTCGATTCA 3039
Query 3006 TACCAACTCCCTGATGCCAAAGGTTATAGCAGTTTGTTGAGGCATTTACTTAATGTAACC 3065
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3040 TACCAACTCCCTGATGCCAAAGGTTATACCAGTTTGTTGAGGCATTTACTTAATGTAACC 3099
Query 3066 GATGAAGAGAGGCAAATAAGACGTGAAGAGATACTATCAACAAGTTTGAAGGACTTCAAG 3125
|| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||
Sbjct 3100 GACGAAGAGAGGCAAATAAGGCGTGAAGAGATATTATCTACAAGTTTGAAGGACTTCAAG 3159
Query 3126 GAATTCGCAGAGGCAATAGACTCAGTTAGAGATAAAGGCGTTGCAGTGGCAGTGGCATCA 3185
||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct 3160 GAATTCGCAGAGGCAATAGACTCTGTTAGTGATAAAGGCGTTGCAGTGGCCGTGGCATCA 3219
Query 3186 CAAGAAGACATTGATGCAGCAAACAAAGAACGCTCAAACTTTTTCGAGGTGAAGAAAG-- 3243
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 3220 CAAGAAGACATTGATGCAGCAAACAGAGAACGCTCAAATTTTTTCGAGGTGAAGAAAGCA 3279
Query 3244 G-TCTCTGAGTCTGAGACCCTCTTATAAAG 3272
| ||||||||||||||||||||||| ||||
Sbjct 3280 GCTCTCTGAGTCTGAGACCCTCTTAGAAAG 3309
> AT3G19170.1 | Symbols: ATPREP1, ATZNMP, PREP1 | presequence protease
1 | chr3:6625421-6632033 REVERSE LENGTH=3559
Length=3559
Score = 3520 bits (1906), Expect = 0.0
Identities = 2674/3045 (88%), Gaps = 51/3045 (2%)
Strand=Plus/Plus
Query 232 TCAATGGACAGTTCTCTCGCTTATCCATTCGCGCCGTCGCTACACAATCCG---CACCTT 288
||||||| |||||||||||| | || ||||||||||||| |||||| ||| ||| ||
Sbjct 380 TCAATGGGCAGTTCTCTCGCCTCTCTGTTCGCGCCGTCGCCACACAACCCGCTCCACTTT 439
Query 289 CTTC-AATTCCCGGTCAAGATGAAGCTGAGAAGCTTGGATTTGAGAAAGTCTCTGAAGAG 347
| | | | ||||||||||| |||||||||||||||||||| ||||| || |||||
Sbjct 440 ATCCTGA-TGTAGGTCAAGATGAGGCTGAGAAGCTTGGATTTGAAAAAGTGTCGGAAGAA 498
Query 348 TTTATCTCAGAGTGTAAATCTAAGGCTG-TTCTCTTCAGACACAAGAAAACCGGTTGCGA 406
|| ||||||||||||||||| ||||| | | ||||||| |||||||||||| ||||||||
Sbjct 499 TTCATCTCAGAGTGTAAATCAAAGGC-GATACTCTTCAAACACAAGAAAACTGGTTGCGA 557
Query 407 GGTGATGTCTGTTTCAAACGATGATGAGAACAAGGTGTTTGGCATTGTTTTCAGGACTCC 466
|||||||||||| ||||| || |||||||||||||| || || |||||||||| |||||
Sbjct 558 GGTGATGTCTGTGTCAAATGAGGATGAGAACAAGGTCTTCGGTGTTGTTTTCAGAACTCC 617
Query 467 TCCGAAAGATTCCACTGGCATTCCTCACATACTGGAACATAGCGTAT-TATGTGGGTCAA 525
|||||| ||||||||||||||||| |||||||||||||||||||| | ||||||||||||
Sbjct 618 TCCGAAGGATTCCACTGGCATTCCGCACATACTGGAACATAGCGT-TCTATGTGGGTCAA 676
Query 526 GAAAGTACCCGCTGAAGGAACCATTTGTCGAATTATTAAAGGGAAGTTTGCATACTTTCC 585
||||||||||| | || || |||||||| ||| || | |||||||||||||||||||| |
Sbjct 677 GAAAGTACCCGGTAAAAGAGCCATTTGTTGAACTACTCAAGGGAAGTTTGCATACTTTTC 736
Query 586 TTAATGCATTCACATATCCTGATAGGACTTGCTACCCAGTTGCTTCCACAAATACAAAGG 645
| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 737 TAAATGCATTCACATATCCTGATAGGACCTGCTACCCAGTTGCTTCCACCAATACAAAGG 796
Query 646 ATTTCTACAACCTTGTCGATGTATACTTGGATGCTGTGTTCTTCCCCAAGTGTGTGGATG 705
|||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 797 ATTTTTACAATCTTGTCGATGTATATTTGGATGCTGTCTTCTTCCCCAAGTGTGTGGATG 856
Query 706 ACGTTCACACTTTTCAGCAGGAGGGTTGGCACTATGAGCTTAACGATCCTTCAGAAGACA 765
||| |||||| |||||||| ||||| ||||||||||| ||||| ||||| || |||||||
Sbjct 857 ACGCTCACACCTTTCAGCAAGAGGGCTGGCACTATGAACTTAATGATCCCTCGGAAGACA 916
Query 766 TATCTTACAAAGGCGTTGTTTTTAATGAGATGAAAGGTGTCTATTCACAACCTGATAATA 825
||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 917 TATCTTACAAAGGTGTTGTTTTTAATGAGATGAAAGGGGTCTATTCACAGCCTGATAATA 976
Query 826 TACTAGGGCGGATTACTCAACAGGCCTTATGCCCGGAAAATACATACGGTGTTGACAGTG 885
| ||||||| ||| ||||||||||||||| ||| ||||||||||| |||||||||||||
Sbjct 977 TTTTAGGGCGAATTGCTCAACAGGCCTTATCCCCAGAAAATACATATGGTGTTGACAGTG 1036
Query 886 GAGGTGATCCAAAAGATATCCCTAATCTTACGTTTGAGGAATTTAAGGAGTTCCACCGTC 945
||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||
Sbjct 1037 GAGGTGATCCAAAAGATATTCCTAATCTGACATTTGAGGAATTCAAGGAGTTCCACCGTC 1096
Query 946 AATATTATCACCCAAACAATGCCAGGATATGGTTCTATGGAGATGATGATCCAGTTCACC 1005
||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||
Sbjct 1097 AATATTATCACCCAAGCAACGCCAGGATCTGGTTCTATGGAGATGATGATCCCGTTCACC 1156
Query 1006 GCCTCTGCGTCTTGAGTGAATACTTGAACATGTTTGATGCAAGTCCAGCTCGTGATAGTT 1065
||||| | |||||||||||||||||| | |||||||| ||||||||| ||| ||||||
Sbjct 1157 GCCTCCGTGTCTTGAGTGAATACTTGGATATGTTTGAAGCAAGTCCATCTCCCAATAGTT 1216
Query 1066 CAAAGGTTGAACCACAAAAGCTATTCTCTGGGCCTCG-CAGAATTGTTGAAAAATATCCT 1124
||||| || || |||||||||||||||| |||| | |||| | ||||| |||||||||
Sbjct 1217 CAAAGATTAAATTTCAAAAGCTATTCTCTGAGCCT-GTCAGACTGGTTGAGAAATATCCT 1275
Query 1125 GCTGGT-GAAGATGGCGACCTTAAGAAGAAACGTATGGTGTGCCTTAACTGGCTGCTCTC 1183
|||||| | |||||| |||||||| ||||| | |||| ||||| |||||||||| | ||
Sbjct 1276 GCTGGTCG-AGATGGTGACCTTAAAAAGAAGCATATGTTGTGCGTTAACTGGCTATTGTC 1334
Query 1184 TGACAAGCCAC-TGGACTTGCAAACTCAACTCGCGCTTGGGTTTTTGGATCATCTTATGC 1242
||| ||||| | ||||||||||||||||||| || ||||| || ||||||||||||||||
Sbjct 1335 TGAGAAGCC-CTTGGACTTGCAAACTCAACTTGCACTTGGCTTCTTGGATCATCTTATGC 1393
Query 1243 TTGGGACTCCTGCTTCCCCATTGAGAAAAATCTTATTGGAAAGCGGATTAGGAGAAGCTC 1302
| |||||||||||||| ||| | ||||| ||||||||||||||||| |||||||||||||
Sbjct 1394 TGGGGACTCCTGCTTCACCACTAAGAAAGATCTTATTGGAAAGCGGTTTAGGAGAAGCTC 1453
Query 1303 TTGTTAATAGTGGGATGGAAGATGAACTTC-TCCAGCCCCAATTCAGTATAGGTTTGAAA 1361
|||| | ||||||| || ||| |||| || | |||||||| ||| |||| |||||||||
Sbjct 1454 TTGTCAGTAGTGGGTTGTCAGACGAAC-TCTTGCAGCCCCAGTTCGGTATTGGTTTGAAA 1512
Query 1362 GGTGTTTCCGATGATAATGTCCAAAAGGTTGAAGACTTGGTCATGAATACTCTGAGAAAC 1421
||||| ||||| || ||||| |||||||||||||| ||| ||||| ||||||||| |||
Sbjct 1513 GGTGTGTCCGAAGAGAATGTTCAAAAGGTTGAAGAGTTGATCATGGATACTCTGAAAAAG 1572
Query 1422 TTGGCAGATGAGGGGTTTGACACTGATGCTGTTGAGGCATCTATGAATACCATTGAGTTT 1481
|||||||| || |||||||||| ||||||||| |||||||| |||||||| |||||||||
Sbjct 1573 TTGGCAGAAGAAGGGTTTGACAATGATGCTGTGGAGGCATCCATGAATACAATTGAGTTT 1632
Query 1482 TCTCTGAGAGAAAACAATACAGGGTCTTTCCCTCGTGGTTTATCACTTATGCTTCAATCA 1541
||| |||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1633 TCTTTGAGGGAAAACAACACAGGATCTTTCCCTCGTGGTTTATCACTTATGCTCCAATCT 1692
Query 1542 ATTGCGAAATGGATATACGACATGGATCCTTTTGAGCCATTAAAGTATGA-GGAATCATT 1600
||| | |||||||||||||| ||||||||||||||||||||||||||| | |||| ||||
Sbjct 1693 ATTTCAAAATGGATATACGATATGGATCCTTTTGAGCCATTAAAGTAT-ACGGAACCATT 1751
Query 1601 GAAGTCCCTGAAAGCTAGAATAGCTGAGAAAGGATCTAAGGCTGTCTTTTCCCCTCTGAT 1660
|||| |||||||| | |||||||||||| | ||||| ||||||||||||||||| |||||
Sbjct 1752 GAAGGCCCTGAAAACCAGAATAGCTGAGGAGGGATCCAAGGCTGTCTTTTCCCCACTGAT 1811
Query 1661 AGAGGAGTTTATTTTGAACAACCCTCATTGTGTTACTATCGAGATGCAGCCTGATCCAGA 1720
|||| || |||| ||||||||| | ||| ||||||| || ||||||||||||||||| ||
Sbjct 1812 AGAGAAGCTTATCTTGAACAACTCGCATCGTGTTACCATAGAGATGCAGCCTGATCCTGA 1871
Query 1721 GAAAGCTTCTCAAGAGGAAGCGGAGGAGAAAATTATTCTAGAAAAAGTTAAAGCAAG-TA 1779
|||||| |||||||||||| ||| ||||||| ||| || |||||||||||||| || ||
Sbjct 1872 AAAAGCTACTCAAGAGGAAGTGGAAGAGAAAAATATCCTGGAAAAAGTTAAAGC-AGCTA 1930
Query 1780 TGACAGAAGAGGATCTTGCAGAACTAGCGCGTGCCACAGAGGAGTTGAAATTGAAGCAAG 1839
|||||||||| ||||||||||| ||||| ||||| ||||||||| |||||||||| ||||
Sbjct 1931 TGACAGAAGAAGATCTTGCAGAGCTAGCACGTGCTACAGAGGAGCTGAAATTGAAACAAG 1990
Query 1840 AGACTCCTGACCCTCCTGAAGCACTGAAATGCGTTCCAAGTTTAAACTTGAGTGACATTC 1899
| ||||||||||||||||||||| ||| ||| || |||||||| |||||| |||||||||
Sbjct 1991 AAACTCCTGACCCTCCTGAAGCATTGAGATGTGTCCCAAGTTTGAACTTGGGTGACATTC 2050
Query 1900 CAAAAGAACCTA-TATATGTTCCCACTGAGGTTGGAGATATTAATGGCGTGAAGGTTTTG 1958
|||||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 2051 CAAAAGAACCTACT-TATGTTCCCACCGAGGTTGGAGATATTAATGGTGTGAAGGTTTTG 2109
Query 1959 CGGCATGATCTCTTT-ACAAATGATA-TACTCTACACTGAAGTAGTCTTTGATATGGGCT 2016
|||||||| || ||| || ||||||| || |||| |||||||||||||||||||| || |
Sbjct 2110 CGGCATGACCT-TTTCACCAATGATATTA-TCTATACTGAAGTAGTCTTTGATATTGGTT 2167
Query 2017 CACTAAAACATGAGCTTCTTCAACTGA-TACCTCTCTTCTGTCAATCATTACTAGAGATG 2075
| || |||||||||||||||| ||| | |||| || ||||||||||||||||| ||||||
Sbjct 2168 CGCTGAAACATGAGCTTCTTCCACT-AGTACCACTTTTCTGTCAATCATTACTGGAGATG 2226
Query 2076 GGCACGCAAGATTTGACTTTTGTACAACTTAATCAGTTAATTGGAA-GAAAGACCGGAGG 2134
||||| |||||||||||||||| |||||||||||||| ||||||| |||| || |||||
Sbjct 2227 GGCACAAAAGATTTGACTTTTGTTCAACTTAATCAGTTGATTGGAAGGAAA-ACGGGAGG 2285
Query 2135 GATATCAGTTTATCCCCTTACATCCTCTGTGTA-TGGTAGGGATGATCCATGTAGCAAAA 2193
|||||||||||||||||||||||| || ||| | |||| |||||| ||||| |||||||
Sbjct 2286 GATATCAGTTTATCCCCTTACATCATCAGTG-AGGGGTAAGGATGAACCATGCAGCAAAA 2344
Query 2194 TTATTGTGCGTGGAAAATCCATGGTTGGACGCGCTGAAGACCTTTTCAACCTGATGAACT 2253
|||| || || ||||||||||||| ||| || ||||| |||||||| |||||||||||||
Sbjct 2345 TTATCGTACGCGGAAAATCCATGGCTGGGCGTGCTGACGACCTTTTTAACCTGATGAACT 2404
Query 2254 G-TGTGCTGCAAGAGGTTCGATTTACAGATAAACA-ACGGTTTAAACAATTCGTCTCTCA 2311
| | || |||||||||||| |||||||||| | || | |||||||||| || ||||||||
Sbjct 2405 GCT-TGTTGCAAGAGGTTCAATTTACAGATCAGCAGA-GGTTTAAACAGTTTGTCTCTCA 2462
Query 2312 GAGTAGAGCACGAATGGAGAACCGATTGAGGGGAAGTGGTCAAGGAATTGCTGCTGCGAG 2371
|| |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 2463 AAGCAGAGCACGGATGGAGAACCGATTGAGGGGAAGTGGTCATGGAATTGCTGCGGCGAG 2522
Query 2372 GATGGATGCAATGTTGAACGTTGCTGGATGGATGTCTGAACAGATGGGTGGTCTCAGTTA 2431
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 2523 GATGGATGCAATGTTGAACATTGCTGGATGGATGTCTGAACAGATGGGTGGTCTCAGCTA 2582
Query 2432 CCTTGAATTTCTACACACCCTTGAACAGAAGGTGGATCAAGACTGGGAAGGAATTTCATC 2491
||||||||| |||| || |||||| |||| |||||| ||||||||||||||||||||||
Sbjct 2583 TCTTGAATTTTTACATACTCTTGAAAAGAAAGTGGATGAAGACTGGGAAGGAATTTCATC 2642
Query 2492 CTCACTTGAGGAAATCAGAAGATCTTTCCTTTCCAGGAATGGTTGCATAGTTAATATGAC 2551
||| |||||||| |||||||||||| ||||| | || || ||||||||||||||||||||
Sbjct 2643 CTCGCTTGAGGAGATCAGAAGATCTCTCCTTGCTAGAAACGGTTGCATAGTTAATATGAC 2702
Query 2552 TGCTGATGGGAAGTCCCTCACAAA-CACGGAAAAATATGTTGGAAAATTTCTTGATTTAC 2610
||||||||||||||| |||||||| | ||||||| ||||| ||||||||| |||||||
Sbjct 2703 TGCTGATGGGAAGTCTCTCACAAATGTC-GAAAAATCTGTTGCAAAATTTCTAGATTTAC 2761
Query 2611 TCCCTGAAAATCCATCTGGTGGACTCGTCACTTGGGATGCACGACTTCCTTTGAGAAATG 2670
||||||| || || |||||||| || ||||||||||||| ||||||||| |||||||||
Sbjct 2762 TCCCTGAGAACCCGTCTGGTGGGCTTGTCACTTGGGATGGTCGACTTCCTCTGAGAAATG 2821
Query 2671 AAGCAATTGTGATACCAACCCAGGTGAACTATGTTGGAAAAGCGGGAAATATATACAGCA 2730
|||| ||||| |||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct 2822 AAGCCATTGTAATACCAACCCAGGTAAACTATGTTGGAAAAGCGGGTAACATATACAGCA 2881
Query 2731 GTGGCTACGAGCTTGATGGAAGTTCATATGTTATATCAAAGCATATTAGTAACACATGGT 2790
|| || ||||||||||| ||| | ||||||||||||||||||||||| || |||||||
Sbjct 2882 CCGGGTATGAGCTTGATGGCAGTGCGTATGTTATATCAAAGCATATTAGCAATACATGGT 2941
Query 2791 TATGGGATCGTGTCCGTGTAAGTGGTGGTGCATATGGAGGTTTCTGTGATTTTGATTCAC 2850
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2942 TATGGGATCGTGTTCGTGTAAGTGGTGGTGCATATGGAGGTTTCTGTGATTTCGATTCGC 3001
Query 2851 ATTCGGGAGTATTTTCGTT-CTTATCTTACCGTGATCCCAACCTATTAAAGACTCTGGAC 2909
|||| ||||||||||| || |||||| ||||| ||||| ||| | || ||||| || ||
Sbjct 3002 ATTCAGGAGTATTTTC-TTACTTATCGTACCGGGATCCAAACTTGTTGAAGACACTTGAT 3060
Query 2910 ATATATGATGGAACTGGGGATTTCTTACGTGGCCTCGATGTCGATGAAGACACCCTTACT 2969
||||||||||||||||| ||||||||||||||||| ||||| ||| |||| || || |||
Sbjct 3061 ATATATGATGGAACTGGAGATTTCTTACGTGGCCTTGATGTGGATCAAGAAACACTCACT 3120
Query 2970 AAAGCAATTATTGGGACAATTGGCGATGTTGATTCATACCAACTCCCTGATGCCAAAGGT 3029
||||| |||||||| || || || |||||||||||||||||| | |||||||||||||||
Sbjct 3121 AAAGCTATTATTGGCACCATCGGTGATGTTGATTCATACCAATTACCTGATGCCAAAGGT 3180
Query 3030 TATAGCAGTTTGTTGAGGCATTTACTTA-ATGTAACCGATGAAGAGAGG-CAAATAA-GA 3086
|||||||||||||||||||||||||| | ||||| || ||||| | | |||| || |
Sbjct 3181 TATAGCAGTTTGTTGAGGCATTTACTCGGA-GTAACTGACGAAGA-ACGACAAAGAAAG- 3237
Query 3087 CGTGAAGAGATACTATCAACAAGTTTGAAGGACTTCAAGGAATTCGCAGAGGCAATAGAC 3146
||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||||
Sbjct 3238 CGTGAAGAGATACTAACAACAAGTTTGAAGGACTTCAAGGATTTCGCACAAGCAATAGA- 3296
Query 3147 TCAG-TTAGAGATAAAGGCGTTGCAGTGGCAGTGGCATCACAAG-AAGACATTGATGCAG 3204
| | ||||||||||||| ||||| ||||| |||||||| | | |||||||||||||||
Sbjct 3297 TGTGGTTAGAGATAAAGGTGTTGCGGTGGCTGTGGCATC-CGCGGAAGACATTGATGCAG 3355
Query 3205 CAAACAAAGAACGCTCAAACTTTTTCGAGGTGAAGAAAGGTCTCT 3249
| ||||| |||||||| |||||||||||||||||||||| |||||
Sbjct 3356 CGAACAATGAACGCTCCAACTTTTTCGAGGTGAAGAAAGCTCTCT 3400
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 162791730035
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5