BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923450 Length=322 Score E Sequences producing significant alignments: (Bits) Value AT1G09080.1 | Symbols: BIP3 | Heat shock protein 70 (Hsp 70) fa... 200 6e-51 > AT1G09080.1 | Symbols: BIP3 | Heat shock protein 70 (Hsp 70) family protein | chr1:2929217-2931841 REVERSE LENGTH=2116 Length=2116 Score = 200 bits (108), Expect = 6e-51 Identities = 135/148 (91%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 1 CTCGAATCCCAAAAATTCAGTAGATGTTAAAGGATTTCTTCGATGGCAAGGAACCCAACA 60 |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||| || Sbjct 1194 CTCGAATCCCAAAAGTTCAGCAGATGTTAAAGGATTTCTTCGACGGCAAGGAACCCAGCA 1253 Query 61 AAGGAACTAACCCTGATGAGGTTTTGGCCTAT-ACAACCGCCGTCCAAGGTGGAGTATTA 119 |||| |||||||||||||||| | |||||||| | |||| |||||||||||||||||| Sbjct 1254 AAGGGACTAACCCTGATGAGGCTGTGGCCTATGGC-GCCGCGGTCCAAGGTGGAGTATTA 1312 Query 120 AGTGGTGAAGGTGGAGAAGAAACGCAAA 147 ||||||||||||||||||||||| |||| Sbjct 1313 AGTGGTGAAGGTGGAGAAGAAACACAAA 1340 Score = 176 bits (95), Expect = 1e-43 Identities = 127/142 (89%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 161 GAAGAAGTCTCAGGTGTTCACTACTTACCAAGATCAGCAAACTACTGTTACTATCAACGT 220 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1438 GAAGAAGTCTCAGGTGTTCACTACTTACCAAGATCAGCAAACTACTGTGACTATCAACGT 1497 Query 221 CTATGAAG---AGATAAGCATGACGAAAGATAACCCCGAGCTCAGAAATTTCCAGCTCAC 277 ||| |||| ||| |||||||||||||||||||| |||||| |||| ||| | ||||| Sbjct 1498 CTACGAAGGCGAGAGAAGCATGACGAAAGATAACCGCGAGCTTGGAAAATTCGATCTCAC 1557 Query 278 CGGCCTTCTTCCTGCACCTAGG 299 ||| ||||||||||||| ||| Sbjct 1558 AGGCATTCTTCCTGCACCCAGG 1579 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14979789202 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5