BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923516 Length=2230 Score E Sequences producing significant alignments: (Bits) Value AT1G50660.1 | Symbols: | unknown protein; INVOLVED IN: biologi... 3627 0.0 AT3G20350.1 | Symbols: | unknown protein; INVOLVED IN: biologi... 1122 0.0 AT1G50659.1 | Symbols: | | chr1:18770937-18771930 REVERSE LEN... 717 0.0 > AT1G50660.1 | Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink). | chr1:18770937-18774686 FORWARD LENGTH=2928 Length=2928 Score = 3627 bits (1964), Expect = 0.0 Identities = 2143/2229 (96%), Gaps = 14/2229 (1%) Strand=Plus/Plus Query 3 TATGGCGGTGATTAAGTGATGAAAGTCACCGGAAAGCCGTATTCGACGGCGACATTACCG 62 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 432 TATGGCGGTGATTACGTGATGAAAGTCACCGGAAAGCCGTATTCGACGGCGACATTACCG 491 Query 63 GCTTTTGAGTCGGAAAAGAATCTCTTCTCTCACGGTCCAGATCTCAGAGCTATTCAAAGA 122 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 492 GCCTTTGAGTCGGATAAGAATCTCTTCTCTCACGGTCCAGATCTCAGAGCTATTCAAAGA 551 Query 123 GCTACTACAGTCACTAAACGTCGAGCAAGGAACCCGAGTTTGACTCGTCAGCGAAGATCC 182 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 552 GCTACTACTGTCACTAAACGTCGAGCTAGGAACCCGAGTTTGACTCGTCAGCGAAGATCC 611 Query 183 GTTGCTTCTGGTGGCAGACGAAGCCGGCCGGAGACTCCGCTATTGAAATGGAAGGTGGAG 242 | | |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 612 GGTCCTTCTGGTGGCAGACGAAGCCGGCCGGAGACTCCTTTATTGAAATGGAAGGTGGAG 671 Query 243 GATCGGAATAAAGAGAGAAGCGGCGTTGTCGAAGACGATGATTACGAGGATGATGGATGT 302 ||||||||||||||||||||||||||||| ||||||||||||||| || ||| | Sbjct 672 GATCGGAATAAAGAGAGAAGCGGCGTTGTAGAAGACGATGATTAC------GA-GGA--T 722 Query 303 AGTAATAATAACCAGGTTGCGAGGTCAGAGACTACTCGCCGCAAGGATCGGAGGAAAATC 362 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 723 -G--ATAATCACCAGGTTGCGAGGTCAGAGACTACTCGCCGCAAGGATCGGAGGAAAATC 779 Query 363 TCACGGCCTGTCTCTGTTAGGAAACTCGCCGCCGGGCTATGGCGGTTGCAAGTTCCTGAC 422 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 780 GCACGGCCTGTCTCTGTTAGGAAACTCGCCGCTGGGCTATGGCGGTTGCAAGTTCCTGAC 839 Query 423 GCGAGTTCTAGCGGCGGAGAAAGAAAGGGCAAAGAGGGGTTAGGGTTTCAGGGATGTGCT 482 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 840 GCGAGTTCCAGCGGCGGAGAAAGAAAGGGCAAAGAGGGGTTAGGGTTTCAGGGAAATGGT 899 Query 483 GGATACATGGGTGTTCCGTATCTTTATCATCATAGTGACAAACCTTCTGGCGGTCAAAGC 542 ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||| Sbjct 900 GGATACATGGGTGTTCCGTATCTTTATCACCATAGTGACAAACCCTCTGGTGGTCAGAGC 959 Query 543 AATAAGATAAGGCAGAACCCTAGCACTATTGCTACGACAAAAAATGGATTCTTGTGTAAG 602 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 960 AATAAGATAAGGCAGAACCCTAGTACTATTGCTACGACAAAAAATGGATTCTTGTGTAAG 1019 Query 603 CTCGAGCCTTCAATGCCATTTCCCCACTCGGCCATGGAGGGGGCAACAAAATGGGATCCT 662 ||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct 1020 CTCGAACCTTCAATGCCATTTCCCCACTCAGCAATGGAGGGGGCGACAAAATGGGATCCT 1079 Query 663 GTCTGCTTGGATACAATGGATGAAGTACACCAAATATATAGCAACATGAAGCGTATTGAT 722 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1080 GTCTGCTTGGATACAATGGAGGAAGTACACCAAATATATAGCAACATGAAGCGTATTGAT 1139 Query 723 CAGCAAGTGAATGCTGTGTCATTGGTTTCTTCCCTTGAAGCAGAACTGGAGGAAGCACAT 782 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1140 CAGCAAGTGAATGCTGTGTCATTGGTTTCTTCCCTTGAAGCAGAACTGGAGGAAGCACAT 1199 Query 783 GCTCGCATTGAAGATCTCGAGAGCGAGAAGCGATCTCATAAAAAGAAACTCGAGCAGTTT 842 |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1200 GCTCGCATAGAAGATCTCGAGAGCGAGAAGCGATCTCATAAAAAGAAGCTCGAGCAGTTC 1259 Query 843 TTGAGGAAAGTTAGCGAGGAGAGGGCTGCTTGGCGGAGCAGGGAGCACGAGAAGGTCCGA 902 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1260 TTGAGGAAAGTTAGCGAGGAGAGGGCTGCTTGGCGGAGCAGGGAGCATGAGAAGGTCCGA 1319 Query 903 GCAATCATTGATGATATGAAAACTGATATGAACAGGGAGAAGAAAACCCGTCAGAGATTA 962 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320 GCAATTATTGACGATATGAAAACTGATATGAACAGGGAGAAGAAAACCCGTCAGAGATTA 1379 Query 963 GAAATCGTGAATCATAAATTAGTCAACGAGCTTGCAGATTCAAAGTTAGCCGTGAAGCGT 1022 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1380 GAAATCGTAAATCATAAACTAGTCAACGAGCTTGCAGATTCAAAGTTAGCCGTGAAGCGT 1439 Query 1023 TACATGCAGGACTACGAAAAGGAAAGGAAAGCAAGAGAATTGATTGAGGAAGTTTGCGAC 1082 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1440 TACATGCAGGACTACGAAAAGGAAAGGAAAGCAAGAGAATTGATTGAGGAAGTTTGCGAC 1499 Query 1083 GAACTTGCAAAGGAAATAGGAGAAGATAAAGCTGAGATTGAAGCATTGAAGAGAGAATCC 1142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1500 GAACTTGCAAAGGAAATAGGAGAAGATAAAGCTGAGATTGAAGCATTGAAGAGAGAATCC 1559 Query 1143 ATGAGCCTCAGAGAAGAAGTAGACGATGAAAGAAGAATGCTGCAGATGGCTGAGGTCTGG 1202 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1560 ATGAGCCTCAGAGAAGAAGTGGACGATGAAAGAAGAATGCTACAGATGGCTGAGGTCTGG 1619 Query 1203 CGTGAGGAACGTGTCCAGATGAAGCTTATTGATGCCAAAGTAGCACTTGAGGAAAGGTAC 1262 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1620 CGTGAGGAACGTGTCCAGATGAAGCTTATTGATGCCAAAGTAGCACTCGAGGAAAGGTAC 1679 Query 1263 TCACAAATGAACAAGCTTGTAGGAGATTTGGAATCTTTCCTTAGGTCAAGAGATATTGTG 1322 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 1680 TCACAAATGAACAAGCTTGTAGGAGATTTGGAATCTTTCCTTAGGTCACGAGATATCGTG 1739 Query 1323 ACAGATGTCAAAGAGGTTAGAGAGGCTGAGTTATTAAGAGAAACCGCGGCATTGGTTAAT 1382 ||||||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||| Sbjct 1740 ACAGATGTCAAAGAGGTGAGAGAAGCTGAGTTATTAAGAGAAACCGCAGCATCAGTTAAT 1799 Query 1383 ATCCAAGAAATCAAGGAATTTACATATGAGCCTTCAAACCCGGATGATATCTACGCGGTG 1442 ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||| Sbjct 1800 ATCCAAGAAATCAAGGAATTTACGTATGTGCCTGCAAACCCGGATGATATCTACGCGGTG 1859 Query 1443 TTTGAAGAAATGAATATCGGTGAAGCCCATGATAGAGAAATGGAGAAATCTGTTGCTTAC 1502 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1860 TTTGAAGAAATGAATCTCGGTGAAGCCCATGATAGAGAAATGGAGAAATCTGTCGCTTAC 1919 Query 1503 AGTCCAACCAGCCATGGTTCTAAAGTTCACACGGTAAGTCCAGATGCCAATTTGATGAAC 1562 ||||||| |||||| | ||||||||||||||||||||||| |||||||||| |||||||| Sbjct 1920 AGTCCAATCAGCCACGATTCTAAAGTTCACACGGTAAGTCTAGATGCCAATATGATGAAC 1979 Query 1563 AAGAAAGGGAGACACTCAGATGCTTTTACTCACCAGAATGGAGACATAGAAGAAGATGAT 1622 ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1980 AAGAAAGGGAGACACTCAGATGCTTATACTCACCAGAATGGAGACATTGAAGAAGATGAT 2039 Query 1623 AGCGGTTGGGAAACAGTGAGCCACCTCGAAGAACAAGGATCGAGTTACTCACCAGATGGG 1682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2040 AGCGGTTGGGAAACAGTGAGCCACCTCGAAGAACAAGGATCGAGTTACTCACCAGATGGG 2099 Query 1683 AGCATTCCTTCTGTGAACAACAAAAATCACCATCACCGAGACAGCAACGCCTCGAGTGGT 1742 ||||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||| Sbjct 2100 AGCATTCCTTCTGTGAACAACAAGAATCACAATCACCGACACAGCAACGCCTCCAGTGGT 2159 Query 1743 GGTACAGAGTCCTTAGGCAAAGTTTGGGATGAGACAATGACTCCAACCACAGAGATAAGC 1802 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2160 GGTACAGAGTCCTTAGGCAAAGTTTGGGATGATACAATGACTCCAACCACAGAGATAAGT 2219 Query 1803 GAAGTGTGTTCCATTCCAAGGCGGTCATCCAAAAAAGTTTCATCGATAGCAAAGCTTTGG 1862 |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| Sbjct 2220 GAAGTGTGTTCCATTCCAAGACGGTCATCCAAAAAGGTTTCATCAATAGCAAAGCTTTGG 2279 Query 1863 AGATCATCAGGTGCAAGCAATGGAGATAGAGATAGCAACTACAAGGTAATATCAATGGAA 1922 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2280 AGATCAACAGGTGCAAGCAATGGAGATAGAGATAGCAACTACAAGGTAATATCAATGGAA 2339 Query 1923 GGTATGAATGGAGGAAGGGTTTCAAATGGGAGAAAATCAAGCGCGGGAATGGTTTCACCA 1982 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2340 GGTATGAATGGAGGAAGGGTTTCAAATGGGAGAAAGTCAAGCGCGGGAATGGTTTCACCA 2399 Query 1983 GACAGAGTCTCGAGCAAAGGCGGATTCAGCCCGATGATGGATTTGGTTGGACAATGGAAC 2042 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2400 GACAGAGTCTCGAGCAAAGGCGGATTTAGCCCGATGATGGATTTGGTTGGACAATGGAAC 2459 Query 2043 TCTTCACCGGAATCTGCAAATCATCCTCATGTAAACCGAGGAGGAATGAAAGGTTGCATA 2102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2460 TCTTCACCGGAATCTGCAAATCATCCTCATGTAAACCGAGGAGGAATGAAAGGTTGCATA 2519 Query 2103 GAATGGCCTAGAGGTGCACAGAAGAATAGTTTGAAGTCAAAACTCATTGAAGCACGAATC 2162 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2520 GAATGGCCTAGAGGTGCACAGAAGAGTAGTTTGAAGTCAAAACTCATTGAAGCACGAATC 2579 Query 2163 GAAAGCCAAAAGGTTCAGTTAAAGCATGTCCTTAAACAGAAGATTTAGGAGCCGAAACGG 2222 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | Sbjct 2580 GAAAGCCAAAAGGTTCAGTTAAAGCATGTCCTTAAACAGAGGATTTAGGAGCC-AAACCG 2638 Query 2223 TTTT-GGTC 2230 |||| |||| Sbjct 2639 TTTTTGGTC 2647 > AT3G20350.1 | Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1); Has 15095 Blast hits to 11224 proteins in 1051 species: Archae - 223; Bacteria - 1586; Metazoa - 7000; Fungi - 1255; Plants - 746; Viruses - 40; Other Eukaryotes - 4245 (source: NCBI BLink). | chr3:7096348-7099767 FORWARD LENGTH=2671 Length=2671 Score = 1122 bits (607), Expect = 0.0 Identities = 1270/1573 (81%), Gaps = 113/1573 (7%) Strand=Plus/Plus Query 156 CCGAGTTTGACTCGTCAGCGAAGATCCGTTGC-T-TCTGGT--GGCAGACGAAGCCGGCC 211 ||||| || |||||||| ||||||| | | || | ||| || || || | |||| |||| Sbjct 345 CCGAGCTTCACTCGTCAACGAAGAT-C-TGGCGTGTCT-GTCAGG-AGGCTAAGCAGGCC 400 Query 212 GGAGACTCCGCTATTGAAATGGAAGGTGGAGGATCGGAATAAAGAGAGAAGCGGCGTTGT 271 ||||||||| | |||||||| |||||||||||||| || | ||| || |||||| || Sbjct 401 GGAGACTCCTCAATTGAAATCGAAGGTGGAGGATCAAAACATTGAGCGATGCGGCGGGGT 460 Query 272 CGAAGACGATGATTACGAGGATGATGGATGTAGTAATAATAACCAGGTTGCGAGGTCAGA 331 ||||| | |||| ||||||||||| ||| | | |||| | | | |||| ||||| Sbjct 461 TGAAGATGGTGATAACGAGGATGAT-GAT-T-G---TAAT-A--A-GATGCGTTGTCAG- 509 Query 332 GACTACTCGCCGCAAGGATCGGAGGAAAATCTCACGGCCTGTCT-CTGTTAGGAAACTCG 390 || | || | | | | ||| | | | |||||||| | ||||||||||||| | Sbjct 510 GA--A--CG--G--A-G-T---AGG--AGTGT-ACGGCCTG-ATACTGTTAGGAAACTTG 552 Query 391 CCGCCGG-GCTATGGCGGTTGCAAGTTCCTGACGCGAG-TTCTAGCGGCGGAGA-AAGAA 447 | ||||| | | ||||| |||| ||| || || ||| | ||||||||||||||| ||| Sbjct 553 CTGCCGGAG-TGTGGCGATTGCGAGTCCCGGATGCG-GTTTCTAGCGGCGGAGATAAG-- 608 Query 448 AGG-GCAAAGAGGGGTTAGGGTTTCAGG-----GAT-G---TGCTGGATACATGGGTGTT 497 ||| |||| || ||||| ||||||||| | | | ||||||| || ||||| | Sbjct 609 AGGAGCAAGGATCGGTTACGGTTTCAGGAAACTGCTGGTCCTGCTGGAAACTTGGGTCCT 668 Query 498 CCGTATCT-TTATCATCA-TA-G-TGACAAACCTTCTGGCGGTCAAAGCAATAAGAT-AA 552 | || | | |||||| || | | |||||||| ||||||| ||||||||| || | || Sbjct 669 CTGT-TTTATTATCACCACCATGATGACAAACATTCTGGCTTTCAAAGCAACAA-TTCAA 726 Query 553 GGCAGAACCCTAGCACTATTGCTACGACAAAAAATGGATTCTTGTGTAAGC-TCGAGCCT 611 | | || | |||| || | | | ||||||||||||||| | |||||| Sbjct 727 -G-A-AA--CAAGCA-TA--G-T----------A--GATTCTTGTGTAAGCAT-GAGCCT 764 Query 612 TCAATGCCATTTCCCCACTCG-GCCATGGAGGGGGCAACAAAATGGGATCCTGTCTGCTT 670 ||| | ||||||||||||| | || |||||||| ||||||||||||||||| ||||||| Sbjct 765 TCAGTTCCATTTCCCCACT-GCGCGATGGAGGGAGCAACAAAATGGGATCCCATCTGCTT 823 Query 671 GGATACAATGGATGAAGTACACCAAATATATAGCAACATGAAGCGTATTGATCAGCAAGT 730 |||||||| |||||| ||||||||||| |||| |||| ||||| | | | |||| ||||| Sbjct 824 GGATACAAGGGATGATGTACACCAAATCTATACCAACGTGAAGTGGAATAATCAACAAGT 883 Query 731 GAATGCTGTGTCATTGGTTTCTTCCCTTGAAGCAG-AACTGGAGGAAGCACATGCTCGCA 789 ||||| ||| ||||| | |||||| ||||| | |||| ||||||| | |||| ||| Sbjct 884 GAATGATGTTTCATTAGCTTCTTCTATTGAA-TTGAAACTTCAGGAAGCTCGTGCTTGCA 942 Query 790 TTGAA-GATCTCGAGAGCGAGAAGCGATCTCATAAAAAGAAACTCGAGCAGTTTTTGAGG 848 || || ||||| ||||| |||||||||||||| |||||||| || |||||||| ||| | Sbjct 943 TT-AAGGATCTTGAGAGTGAGAAGCGATCTCAGAAAAAGAAGCTTGAGCAGTTCCTGAAG 1001 Query 849 AAAGTTAGCGAGGAGAGGGCTGCTTGGCGGAGCAGGGAGCACGAGAAGGTCCGAGCAATC 908 |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct 1002 AAAGTTAGCGAGGAGAGGGCAGCTTGGCGGAGCAGAGAGCATGAGAAGGTCCGAGCAATT 1061 Query 909 ATTGATGATATGAAAACTGATATGAA-CAGGGAGAAGAAAACCCGTCAGAGATTAGAAAT 967 |||||||| |||||| |||| ||||| || ||| ||||| || ||||||||||||||||| Sbjct 1062 ATTGATGACATGAAAGCTGACATGAACCA-GGAAAAGAAGACTCGTCAGAGATTAGAAAT 1120 Query 968 CGTGAA-TCATAAATTAGTCAACGAGCTTGCAGATTCAAAGTTAGCCGTGAAGCGTTACA 1026 ||| || ||| ||||||||||| ||||||||||||||||||||||| || |||||||||| Sbjct 1121 CGTCAATTCA-AAATTAGTCAATGAGCTTGCAGATTCAAAGTTAGCAGTAAAGCGTTACA 1179 Query 1027 TGCAGGACTACGAAAAGGAAAGGAAAGCAAGAGAATTGATTGAGGAAGTTTGCGACGAAC 1086 |||| || ||| || |||||||||| |||||||||||||| || |||||||| || |||| Sbjct 1180 TGCATGATTACCAACAGGAAAGGAAGGCAAGAGAATTGATCGAAGAAGTTTGTGATGAAC 1239 Query 1087 TTGCAAAGGAAATAGGAGAAGATAAAGCTGAGATTGAAGCATTGAAGAGAGAATCCATGA 1146 | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1240 TGGCAAAGGAAATAGAAGAAGATAAAGCTGAGATTGAAGCATTGAAGAGCGAATCCATGA 1299 Query 1147 GCCTCAGAGAAGAAGTAGACGATGAAAGAAGAATGCTGCAGATGGCTGAGGTCTGGCGTG 1206 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1300 ATCTCAGAGAGGAAGTAGACGATGAAAGAAGAATGCTGCAGATGGCTGAGGTTTGGCGTG 1359 Query 1207 AGGAACGTGTCCAGATGAAGCTTATTGATGCCAAAGTAGCACTTGAGGAAAGGTACTCAC 1266 |||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||| Sbjct 1360 AGGAACGTGTCCAGATGAAGCTTATTGATGCCAAAGTAACACTCGAGGAAAAGTATTCAC 1419 Query 1267 AAATGAACAAGCTTGTAGGAGATTTGGAATCTTTCCTTAGGTCAAGAGATATTGTGACAG 1326 |||||||||| || ||||||||| ||||| | ||||| || |||||| ||| | |||| Sbjct 1420 AAATGAACAAACTCGTAGGAGATATGGAAGCCTTCCTCAGTTCAAGAAATACT---ACAG 1476 Query 1327 ATGTCAAAGAGGTTAGAGAGGCTGAGTTATTAAGAGAAACCGCGGCATTGGTT-A-A-TA 1383 ||| |||||||| |||| || || || ||||||||||| || |||| ||| | | || Sbjct 1477 GTGTGAAAGAGGTGAGAGTTGCGGAATTGTTAAGAGAAACTGCTGCATCAGTTGATAATA 1536 Query 1384 TCCAAGAAATCAAGGAATTTACATATGAGCCTTCAAACCCGGATGATATC-TACGCGGTG 1442 |||||||||||||||||||||| ||||| || |||| ||||| |||||| | | | || Sbjct 1537 TCCAAGAAATCAAGGAATTTACGTATGAACCCGCAAAGCCGGACGATATCCT-CATGTTG 1595 Query 1443 TTTGAAGAAATGAATATCGGTGAAGCCCATGATAGAGAAATG-GAGAAATCTGTTGCTTA 1501 |||||| ||||||| || |||||| ||| |||||||||| | ||| ||| |||||| || Sbjct 1596 TTTGAACAAATGAACATGGGTGAAAACCAGGATAGAGAAA-GCGAGCAATATGTTGCCTA 1654 Query 1502 CAGTCCAACCAGCCATGGTTCTAAAGTTCACACGGTAAGTCCAGATGCCAATTTGATGAA 1561 |||||| |||||| | ||| |||| |||||||||||||||||||| ||||||||| || Sbjct 1655 CAGTCCGGTCAGCCACGCTTCAAAAGCTCACACGGTAAGTCCAGATGTCAATTTGATTAA 1714 Query 1562 CAAGAAAGGGAGACACTCAGA-TGCTTTTACTCACCAGAATGGAGACATA-GAAGAAGAT 1619 ||| | ||||||||||| || |||||| ||| | |||||||| || || ||||||||| Sbjct 1715 CAA-A--GGGAGACACTC-GAATGCTTTCACTGATCAGAATGGTGA-ATTTGAAGAAGAT 1769 Query 1620 GATAGCGGTTGGGAAACAGTGAGCCAC-CTCGAAGAACAAGGATCGAGTTACTCACCAGA 1678 || || || |||||||| |||||||| || |||||||| ||||| |||||||| ||||| Sbjct 1770 GACAGTGGCTGGGAAACTGTGAGCCATTCT-GAAGAACACGGATCCAGTTACTCTCCAGA 1828 Query 1679 TGGGAGCATTCCT 1691 || |||||| ||| Sbjct 1829 TGAGAGCATCCCT 1841 > AT1G50659.1 | Symbols: | | chr1:18770937-18771930 REVERSE LENGTH=994 Length=994 Score = 717 bits (388), Expect = 0.0 Identities = 446/472 (94%), Gaps = 12/472 (3%) Strand=Plus/Minus Query 3 TATGGCGGTGATTAAGTGATGAAAGTCACCGGAAAGCCGTATTCGACGGCGACATTACCG 62 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 563 TATGGCGGTGATTACGTGATGAAAGTCACCGGAAAGCCGTATTCGACGGCGACATTACCG 504 Query 63 GCTTTTGAGTCGGAAAAGAATCTCTTCTCTCACGGTCCAGATCTCAGAGCTATTCAAAGA 122 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 503 GCCTTTGAGTCGGATAAGAATCTCTTCTCTCACGGTCCAGATCTCAGAGCTATTCAAAGA 444 Query 123 GCTACTACAGTCACTAAACGTCGAGCAAGGAACCCGAGTTTGACTCGTCAGCGAAGATCC 182 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 443 GCTACTACTGTCACTAAACGTCGAGCTAGGAACCCGAGTTTGACTCGTCAGCGAAGATCC 384 Query 183 GTTGCTTCTGGTGGCAGACGAAGCCGGCCGGAGACTCCGCTATTGAAATGGAAGGTGGAG 242 | | |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 383 GGTCCTTCTGGTGGCAGACGAAGCCGGCCGGAGACTCCTTTATTGAAATGGAAGGTGGAG 324 Query 243 GATCGGAATAAAGAGAGAAGCGGCGTTGTCGAAGACGATGATTACGAGGATGATGGATGT 302 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 323 GATCGGAATAAAGAGAGAAGCGGCGTTGTAGAAGACGATGATTACGAGGATGAT--A--- 269 Query 303 AGTAATAATAACCAGGTTGCGAGGTCAGAGACTACTCGCCGCAAGGATCGGAGGAAAATC 362 | | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 268 A-TCA------CCAGGTTGCGAGGTCAGAGACTACTCGCCGCAAGGATCGGAGGAAAATC 216 Query 363 TCACGGCCTGTCTCTGTTAGGAAACTCGCCGCCGGGCTATGGCGGTTGCAAGTTCCTGAC 422 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 215 GCACGGCCTGTCTCTGTTAGGAAACTCGCCGCTGGGCTATGGCGGTTGCAAGTTCCTGAC 156 Query 423 GCGAGTTCTAGCGGCGGAGAAAGAAAGGGCAAAGAGGGGTTAGGGTTTCAGG 474 |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 155 GCGAGTTCCAGCGGCGGAGAAAGAAAGGGCAAAGAGGGGTTAGGGTTTCAGG 104 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 110642001180 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5