BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg923674
Length=1362
Score E
Sequences producing significant alignments: (Bits) Value
AT1G51780.1 | Symbols: ILL5 | IAA-leucine resistant (ILR)-like ... 2172 0.0
AT1G51760.1 | Symbols: IAR3, JR3 | peptidase M20/M25/M40 family... 1539 0.0
> AT1G51780.1 | Symbols: ILL5 | IAA-leucine resistant (ILR)-like
gene 5 | chr1:19204512-19206586 FORWARD LENGTH=1531
Length=1531
Score = 2172 bits (1176), Expect = 0.0
Identities = 1267/1312 (97%), Gaps = 2/1312 (0%)
Strand=Plus/Plus
Query 7 ATCTCTTGATTCACAATGAGTTTCTGCAAATTGGTTTCTTTTGTTTTGATCCTTCACTTA 66
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 76 ATCTCTTGATTCACGATGAGTTTCTGCAAATTGGTTTCTTTTGTTTTGATCCTTCACTTA 135
Query 67 CTCAACTCGTGTCTGATTTCATGTTCCTCGAATGAGTTGTCTCAAATCCCTAAAAAGTTC 126
|| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct 136 CTAAACTCGTGTCTGATTTCATGTTCCTCGAATGATTTGTCTCAAATTCCTAAAAATTTC 195
Query 127 CTTAGTCTAGCTAAAAGAGATGATTTTTTCGATTGGATGGTTGGAATAAGAAGGAGGATC 186
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 196 CTTAGTCTAGCTAAAAGAGAAGATTTTTTCGATTGGATGGTTGGAATAAGAAGGAGGATC 255
Query 187 CACGAGAACCCAGAATTAGGTTACGAGGAAGTAGAGACATCTAAGCTAGTCAGGACAGAA 246
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 256 CACGAGAACCCAGAGTTAGGTTACGAGGAAGTAGAGACATCTAAGCTAGTCAAGACAGAA 315
Query 247 TTGGAGAAGATGGGTGTGTCTTATAAGTATCCAGTTGCTGTAACTGGTGTTATTGGATAT 306
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 316 TTGGACAAGATGGGTGTGTCTTATAAGAATCCAGTTGCTGTAACTGGTGTTATTGGATAT 375
Query 307 GTTGGAACTGGTCATGCCCCCTTTGTTGCTTTGAGGGCTGATATGGATGCACTTCCTATT 366
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 376 GTTGGAACTGGCCATGCCCCCTTTGTTGCTTTGAGGGCTGATATGGATGCACTTCCTATT 435
Query 367 CAGGAAATGGTGGAATGGGAACACAAGAGTAAGATTCCAGGGAAGATGCACGCTTGCGGT 426
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 CAGGAAATGGTGGAATGGGAACACAAGAGTAAGATTCCAGGGAAGATGCACGCTTGCGGA 495
Query 427 CATGACGCTCACCCTACGATGCTCCTCGGTGCTGCAAAGTTGCTCAAAGAACACCAAGAG 486
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 CATGACGCTCACACTACGATGCTCCTCGGTGCTGCAAAGTTGCTCAAAGAACACCAAGAA 555
Query 487 GAGCTACAGGGTACAGTGATTCTGGTTTTCCAACCAGCTGAGGAAGGAGGAGCAGGTGCA 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 GAGCTACAGGGTACAGTGATTCTGGTTTTCCAACCAGCTGAGGAAGGAGGAGCAGGTGCA 615
Query 547 AAGAAAATCGTGGAGGCTGGAGTGTTGGAGAATGTGGGTGCAATCTTTGGAATACATGTT 606
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 616 AAGAAAATCGTGGAGGCTGGAGTATTGGAGAATGTGGGTGCAATCTTTGGATTACATGTT 675
Query 607 TCCAATCTATTGGGATTAGGTCAAGTGAGCTCAAGAGAGGGTCTATTGATGGCTGGTAGT 666
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 676 TCGAATCTATTGGGATTAGGTCAACTGAGCTCAAGAGAGGGTCTATTGATGGCTGGTAGT 735
Query 667 GGACGTTTCAAAGCTAAGATAAGCGGGAAAGGAGGTCATGCGGCTCTTCCTCAATTCGCC 726
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 736 GGACGTTTCAAAGCTACGATAAGCGGGAAAGGAGGTCATGCAGCTCTTCCTCAATTCGCC 795
Query 727 ATAGATCCAGTATTGGCAGCTTCAAATGTTATTCTGAGCTTACAACACCTGGTTTCGCGA 786
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 796 ATAGATCCAGTATTGGCAGCTTCAAATGTTATTCTGAGCTTACAACACCTCGTTTCACGA 855
Query 787 GAGGCAGATCCTTTAGACTCGCAGGTGGTTACAGTTGCTATATTTGAAGGCAGTGATGCT 846
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 856 GAGGCAGATCCTTTAGACTCGCAGGTGGTTACAGTTGCTACATTTGAAGGCAGTGATGCT 915
Query 847 TTTAATGTCATTCCCGACTCTGTTACTATCGGTGGCACATTCCGAGCCCTTTCACCTAAA 906
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 916 TTTAATGTCATTCCCGACTCTGTTACTATCGGTGGCACATTCCGAGCCCTTTTACCTAAA 975
Query 907 AGTTTTGAGCAACTCAAGCAAAGAATTGAGCAGGTTATCACAACGCAAGCAAGCGTAAAT 966
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 976 AGTTTTGAGCAACTCAAGCAAAGAATTGTTCAGGTTATCACAACGCAAGCAAGCGTAAAT 1035
Query 967 ATGTGTAATGCAACAGTTGACTTTCTTGAAGATGAGACTCCTCCTTTCCCTCCCG-CTGA 1025
|||||||||||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct 1036 ATGTGTAATGCAACAGTTGACTTTCTTGAAGATGAGACTCCTCCTTTCCCGCC-GACTGT 1094
Query 1026 GAACGACAAAGTCTTGCACCTGTTTTACGAGAACGTTTCAGTGGATATGTTAGGGATTGA 1085
|||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1095 GAACAATAAAACCTTGCACCTGTTTTACAAGAACGTTTCAGTGGATATGTTAGGGATTGA 1154
Query 1086 GAATTATGTTGAGACGCGACCAGTAATGGTATCAGAGGATTTCGCTTTCTACCAAAAAGA 1145
||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||
Sbjct 1155 GAATTATGTTGAGACGCTACCAGTGATGGTATCAGAGGATTTTGCTTTCTACCAACAAGC 1214
Query 1146 AATGCCGGGACATTTTAGCTTTGTTGGGATGCAGAACAAATCCCATTCACCAATGGCGAA 1205
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1215 AATCCCGGGACATTTTAGCTTTGTTGGGATGCAGAACAAATCTCATTCACCAATGGCGAA 1274
Query 1206 CCCTCACTCTCCGTATTTTGAAGTTAATGAAGAATTACTCCCTTATGGTGCTTCCCTTCT 1265
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1275 CCCTCACTCTCCGTTTTTTGAAGTTAATGAAGAATTACTCCCTTATGGTGCTTCCCTTCT 1334
Query 1266 TGCTTCTTTGGCCACAAGATATCTTCTTGAGTCGTCTTCATCGCCAAATAAA 1317
|||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 1335 TGCTTCTTTGGCCACAAGATATCTTCTTGACTCATCTTCATCGCCAAATAAA 1386
> AT1G51760.1 | Symbols: IAR3, JR3 | peptidase M20/M25/M40 family
protein | chr1:19199419-19201642 FORWARD LENGTH=1684
Length=1684
Score = 1539 bits (833), Expect = 0.0
Identities = 1174/1337 (88%), Gaps = 29/1337 (2%)
Strand=Plus/Plus
Query 22 ATGAGTTTCTGCAAATTGGTTTCTTTTGTTTTGATCCTTCACTTACTCAACT-CGTGTCT 80
|||||||||| ||||| ||||||||||||||||||||||||||| || || | || |||
Sbjct 144 ATGAGTTTCTTCAAATGGGTTTCTTTTGTTTTGATCCTTCACTTGCTTAA-TCCGACTCT 202
Query 81 GATTTCATGTTCCTCGAATGAGTTGTCTCAAATCCCTAAAAAGTTCCTTAGTCTAGCTAA 140
||||||||||||||| |||| ||| |||||||| ||| |||||| |||| | | |||||
Sbjct 203 GATTTCATGTTCCTCTAATGGGTTATCTCAAATACCTTCAAAGTTTCTTACTTTGGCTAA 262
Query 141 AA-GAGATGATTTTTTCGATTGGATGGTTGGAATAAGAAGGAGGATCCACGAGAACCCAG 199
|| || |||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||
Sbjct 263 AAGGA-ATGATTTTTTCGATTGGATGGTTGGAATCAGAAGGAGAATCCATGAGAATCCAG 321
Query 200 AATTAGGTTACGAGGAAGTAGAGACATCTAAGCTAGTCAGGA-CAGAATTGGAGAAGATG 258
| |||||||| ||||||||||||||||||||||| || | || |||| ||||||||||||
Sbjct 322 AGTTAGGTTATGAGGAAGTAGAGACATCTAAGCTTGTTA-GAGCAGAGTTGGAGAAGATG 380
Query 259 GGTGTGTCTTATAAGTATCCAGTTGCTGTAACTGGTGTTATTGGATATGTTGGAACTGGT 318
||||| ||||||||||| ||||||||||| ||||||||| |||| |||||||||||||||
Sbjct 381 GGTGTTTCTTATAAGTACCCAGTTGCTGTTACTGGTGTTGTTGGGTATGTTGGAACTGGT 440
Query 319 CATGCCCCCTTTGTTGCTTTGAGGGCTGATATGGATGCACTTCCTATTCAGGAAATGGTG 378
||||| || ||||||||||| ||||||||||||||||||||| |||| ||||||||||||
Sbjct 441 CATGCTCCTTTTGTTGCTTTAAGGGCTGATATGGATGCACTTGCTATGCAGGAAATGGTG 500
Query 379 GAATGGGAACACAAGAGTAAGATTCCAGGGAAGATGCACGCTTGCGGTCATGACGCTCAC 438
||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||
Sbjct 501 GAATGGGAACACAAGAGTAAGGTTCCAGGGAAGATGCACGCTTGTGGACATGACGCTCAC 560
Query 439 CCTACGATGCTCCTCGGTGCTGCAAAGTTGCTCAAAGAACACCAAGAGGAGCTACAGGGT 498
|||||||||| |||||||||||||| |||||||||||||| |||| |||||||||||
Sbjct 561 ACTACGATGCTTCTCGGTGCTGCAAAATTGCTCAAAGAACATGAAGAAGAGCTACAGGGC 620
Query 499 ACAGTGATTCTGGTTTTCCAACCAGCTGAGGAAGGAGGAGCAGGTGCAAAGAAAATCGTG 558
|||||| |||| |||||||||||||||||||||||||||| |||||||||||| || |||
Sbjct 621 ACAGTGGTTCTAGTTTTCCAACCAGCTGAGGAAGGAGGAGGAGGTGCAAAGAAGATTGTG 680
Query 559 GAGGCTGGAGTGTTGGAGAATGTGGGTGCAATCTTTGGAATACATGTTTCCAATCTATTG 618
|||||||||||||||||||||||| |||||||||||||| ||||||| | |||| ||||
Sbjct 681 GAGGCTGGAGTGTTGGAGAATGTGAGTGCAATCTTTGGATTACATGTCACAAATCAATTG 740
Query 619 GGATTAGGTCAAGTGAGCTCAAGAGAGGGTC-TATTGATGGCTGGTAGTGGACGTTT-CA 676
| |||||||||||||||||| |||||||||| ||| | ||||||||||||| | ||| ||
Sbjct 741 GCATTAGGTCAAGTGAGCTCGAGAGAGGGTCCTAT-GTTGGCTGGTAGTGG-CTTTTTCA 798
Query 677 AAGCTAAGATAAGCGGGAAAGGAGGTCATGCGGCTCTTCCTCA--ATTCGCCATAGATCC 734
||||||||||||||||||||||||| || || |||||||| || || | | ||||||||
Sbjct 799 AAGCTAAGATAAGCGGGAAAGGAGGCCACGCAGCTCTTCCGCAGCATAC-C-ATAGATCC 856
Query 735 -AGTATTGGCAGCTTCAAATGTTATTCTGAGCTTACAACACCTGGTTTCGCGAGAGGCAG 793
| || |||||||||||||||||||| | |||||||||||||| ||||| ||||||||||
Sbjct 857 GA-TACTGGCAGCTTCAAATGTTATTGTTAGCTTACAACACCTCGTTTCACGAGAGGCAG 915
Query 794 ATCCTTTAGACTCGCAGGTGGTTACAGTTGCTATATTTGAAGGCAGTGATGCTTTTAATG 853
||||||||||||| ||||||||||||||||||| |||||||||| ||| |||||| ||||
Sbjct 916 ATCCTTTAGACTCTCAGGTGGTTACAGTTGCTAAATTTGAAGGCGGTGGTGCTTTCAATG 975
Query 854 TCATTCCCGACTCTGTTACTATCGGTGGCACATTCCGAGCCCTTTCACCTAAAAGTTTTG 913
| ||||| |||||||||||||||||||| ||||||||||| ||||| ||||||| |||
Sbjct 976 TGATTCCTGACTCTGTTACTATCGGTGGTACATTCCGAGCTTTTTCAACTAAAAGCTTT- 1034
Query 914 A-GCAACTCAAGCAAAGAATTGAGCAGGTTATCACAACGCAAGCAAGCGTAAATATGTGT 972
| |||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||
Sbjct 1035 ATGCAACTCAAGAAAAGAATTGAGCAGGTTATCACAAGGCAAGCGAGCGTGAATATGTGT 1094
Query 973 AATGCAACAGTTGACTTTC-TTGAAGATGAGACTCCTCCTTTCCCTCCCGCTG-AGAACG 1030
||||||||||| || |||| ||||||| |||| ||| |||||| || ||| | || |
Sbjct 1095 AATGCAACAGTGGA-TTTCATTGAAGAGGAGAAACCTTTTTTCCCACCAACTGTA-AATG 1152
Query 1031 ACAAAGTCTTGCACCTGTTTTACGAGAACGTTTCAGTG-GATATGTTAGGGATTGAGAAT 1089
|||||| ||| |||| ||||| | |||||||||||| | |||||||||||||||||||||
Sbjct 1153 ACAAAGCCTTACACCAGTTTTTCAAGAACGTTTCAG-GCGATATGTTAGGGATTGAGAAT 1211
Query 1090 TATGTTGAGACGCGACCAGTAATGGTATCAGAGGATTTCGCTTTCTACCAAAAAGAAATG 1149
|| || |||| || |||| |||||| |||||| |||||| ||||||||||| ||| |||
Sbjct 1212 TACGTCGAGATGCAACCATTAATGGGATCAGAAGATTTCTCTTTCTACCAACAAGCAATC 1271
Query 1150 CCGGGACATTTTAGCTTTGTTGGGATGCAGAACAAATCCCATTCACCAATGGCGAACCCT 1209
||||||||||||||||| ||||| ||||| |||||| | | |||||||||||||| ||||
Sbjct 1272 CCGGGACATTTTAGCTTCGTTGGAATGCAAAACAAAGCTCGTTCACCAATGGCGAGCCCT 1331
Query 1210 CACTCTCCGTATTTTGAAGTTAATGAAGAATTACTCCCTTATGGTGCTTCCCTTCTTGCT 1269
||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||| ||||
Sbjct 1332 CACTCGCCGTACTTTGAAGTTAACGAAGAATTACTACCTTATGGTGCTTCCCTTCATGCT 1391
Query 1270 TCTTTGGCCACAAGATATCTTCTTGAG-TC---GTCTTCATCGCCAAATAAAAGTTACAT 1325
|| |||||||||||||||||||||| | | ||||| | | |||||| ||| |||
Sbjct 1392 TCCATGGCCACAAGATATCTTCTTGAACTAAAAG-CTTCAACTCTAAATAAGAGTAACAA 1450
Query 1326 AAAAGATGAACTTTGAT 1342
|||||||||||||||||
Sbjct 1451 AAAAGATGAACTTTGAT 1467
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67067928120
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5