BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg923930 Length=647 Score E Sequences producing significant alignments: (Bits) Value AT1G53670.1 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide re... 992 0.0 > AT1G53670.1 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide reductase B 1 | chr1:20036641-20038219 FORWARD LENGTH=800 Length=800 Score = 992 bits (537), Expect = 0.0 Identities = 613/650 (94%), Gaps = 3/650 (0%) Strand=Plus/Plus Query 1 TTATAAGGTGTGATTGTGTAATGGCTTCTTCTAGTAGTTTAAC-A--ATACAATCAAGTT 57 ||||||| ||||||||||| ||||||||||||| ||| ||||| | ||||||||||| | Sbjct 27 TTATAAGCTGTGATTGTGTGATGGCTTCTTCTACTAGATTAACTATTATACAATCAAGCT 86 Query 58 TCGTCTCTGCAAGAACAAGCCTCAATTCCTTCTCCAAGCCAAATCTTTCTGGCTTCGCTT 117 ||||||| ||||||||||| ||||||| | |||||||| |||||| |||||| ||||||| Sbjct 87 TCGTCTCCGCAAGAACAAGACTCAATTACGTCTCCAAGACAAATCATTCTGGGTTCGCTT 146 Query 118 GTCGTTCTCTTTCAAAACCCAGAAACTTGAGTCTCTTTGTTTCTTCTATGGGTTCTTCTA 177 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 147 GTCGTTCTCTTTCAAAACCCAGAAACTTGAGTCTCTCTGTTTATTCTATGGGTTCTTCTA 206 Query 178 GTTCTTCTCAGAAACCAGACAACGTCCAAGAGGCTGAGAAGAGTGACTATGCTTCTCTAA 237 ||||||||| |||||||||||||||||||||||||||||||| ||| | ||||||||||| Sbjct 207 GTTCTTCTCCGAAACCAGACAACGTCCAAGAGGCTGAGAAGAATGAGTTTGCTTCTCTAA 266 Query 238 GTGAAAATGAATGGAAGAAAAGGCTAACACCAGAACAGTATTACATCACTAGACAGAAGG 297 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 267 GTGAAAATGAATGGAAGAAACGGCTAACACCAGAACAGTACTACATCACTAGACAGAAGG 326 Query 298 GGACAGAGAGAGCTTTCACTGGGGAGTATTGGAACTCAAAGACCCCAGGAGTATACAATT 357 | |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 327 GCACAGAGAGAGCTTTCACTGGGGAGTATTGGAACTCAAAGACCCCTGGAGTATATAATT 386 Query 358 GCCTATGTTGCGACACGCCTCTATTTGATTCATCAACAAAGTTTGATAGTGGAACAGGGT 417 | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 387 GTGTATGTTGCGACACACCTCTATTTGATTCATCAACAAAGTTTGATAGTGGAACAGGGT 446 Query 418 GGCCATCTTATTACAAACCAATTGGAAACAATGTGAAGACAAAGCTAGACCTCTCTATCA 477 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447 GGCCATCTTACTACCAACCAATTGGAAACAATGTGAAGACAAAGCTAGACCTCTCTATCA 506 Query 478 TCTTCATGCCTAGACAAGAAGTTGTCTGTGCTGTTTGTAATGCCCATCTTGGCCATGTCT 537 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 507 TCTTCATGCCTAGACAAGAAGTTGTCTGTGCTGTTTGTAACGCCCATCTTGGTCATGTCT 566 Query 538 TTGATGACGGTCCACGCCCAACGGGAAAACGATATTGTCTCAACAGTGCTGCTCTGAAAC 597 |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 567 TTGACGACGGTCCACGCCCAACCGGAAAACGATATTGCCTCAACAGTGCTGCTCTGAAAC 626 Query 598 TTAACGCATTGGAGAAAACAAGAGATTGAGAGTATCTGGTACAAGGATTT 647 ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 627 TTAACGCATTGGAGAAAACAAGAGATTGAGAGTTTCTGGTACAAGGATTT 676 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31245639434 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5