BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924488 Length=1905 Score E Sequences producing significant alignments: (Bits) Value AT1G64390.1 | Symbols: AtGH9C2, GH9C2 | glycosyl hydrolase 9C2 ... 3149 0.0 > AT1G64390.1 | Symbols: AtGH9C2, GH9C2 | glycosyl hydrolase 9C2 | chr1:23911119-23915229 FORWARD LENGTH=2660 Length=2660 Score = 3149 bits (1705), Expect = 0.0 Identities = 1838/1904 (97%), Gaps = 2/1904 (0%) Strand=Plus/Plus Query 3 TCTCTATCtttttttCAGTCATGGAGAAATTTGCGCCCGTAGCTGCTCTGTTACTGCTTC 62 ||||| ||||||||| || |||||||||||||||||| || ||||||||||||||||||| Sbjct 191 TCTCTCTCTTTTTTTTAGCCATGGAGAAATTTGCGCCTGTCGCTGCTCTGTTACTGCTTC 250 Query 63 TTCTCTGTTTTCCGGTAGCTTTCTCCGGTCATGATTATGGTCAAGCTCTTTCAAAGAGTC 122 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 251 TTCTCTGTTTTCCGGTAGCTTTCTCCGGTCATGATTATGGTCAAGCTCTTTCCAAGAGTC 310 Query 123 TTCTCTTCTTCGAAGCTCAGAGATCTGGTGTTCTTCCTCGTAACCAGAGAGTCACTTGGC 182 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 311 TTCTCTTCTTCGAAGCTCAGAGATCTGGTGTTCTTCCTCGTAACCAAAGAGTCACTTGGC 370 Query 183 GTTCTCACTCCGGTCTCACCGACGGCAAATCAAGCGGCGTGAATCTGGTCGGAGGTTACT 242 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 371 GCTCTCACTCCGGTCTCACCGACGGCAAATCAAGCGGCGTGAATCTGGTCGGAGGTTACT 430 Query 243 ACGACGCCGGAGACAATGTGAAATTCGGACTACCGATGGCTTTCACGGTGACGATGATGG 302 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 431 ACGACGCCGGAGACAATGTGAAATTTGGATTACCGATGGCTTTCACGGTGACGATGATGG 490 Query 303 CGTGGAGTGTGATTGAATACGGTAATCAGTTACAAGTTAACGGCGAGCTTGGAAACTCCA 362 |||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||| Sbjct 491 CGTGGAGTGTGATTGAGTACGGGAATCAATTACAAGCCAACGGCGAGCTTGGAAACTCCA 550 Query 363 TTGACGCCATTAAATGGGGTACTGATTATTTCATCAAAGCCCATCCTGAGCCCAACGTCC 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 551 TTGACGCCATTAAATGGGGTACTGATTATTTCATCAAAGCCCATCCTGAGCCCAACGTCC 610 Query 423 TTTACGGCGAGGTTGGAGATGGCAACACCGACCATTACTGTTGGCAGAGACCGGAAGAAA 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 611 TTTACGGCGAGGTTGGAGATGGCAACACCGACCATTACTGTTGGCAGAGACCGGAAGAAA 670 Query 483 TGACGACGGACCGTAAAGCATACAGGATAGATCCGAGTAATCCCGGGTCGGATCTTGCCG 542 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 671 TGACGACGGACCGGAAAGCTTACAGGATAGATCCGAGTAATCCCGGGTCGGATCTTGCCG 730 Query 543 GAGAAACAGCAGCCGCCATGGCCGCCGCATCAATTGTGTTCCGCCGATCTAACCCTGTTT 602 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 731 GAGAAACAGCAGCCGCCATGGCCGCCGCATCAATTGTTTTCCGCCGATCTAACCCTGTTT 790 Query 603 ACTCTAGGCTACTACTCACTCACGCCTATCAGTTGTTTGATTTCGCCGACAAATACAGAG 662 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 791 ACTCTAGGCTACTACTCACTCACGCCTATCAGTTGTTTGATTTCGCCGACAAATACAGAG 850 Query 663 GAAAATACGACAGCAGTATCACTGTTGCCCAGAAATACTACCGATCCGTCAGTGGTTACA 722 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 851 GAAAATACGACAGCAGTATCACTGTTGCCCAGAAATACTACCGATCCGTCAGCGGTTACA 910 Query 723 ATGACGAGTTACTGTGGGCAGCTGCGTGGCTATACCAAGCTTCGAACAATCAGTTCTACT 782 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 911 ATGACGAGTTATTGTGGGCCGCTGCGTGGCTATACCAAGCTTCGAACAATCAGTTCTACT 970 Query 783 TGGACTACTTGGGTCGCAACGGTGACGCCATGGGTGGAACCGGTTGGTCTATGACTGAGT 842 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 971 TGGACTACTTGGGTCGCAACGGTGACGCCATGGGTGGTACCGGTTGGTCCATGACTGAGT 1030 Query 843 TCGGTTGGGACGTTAAGTACGCTGGTGTTCAAACCCTTGTTGCCAAGTTTTTGATGCAAG 902 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1031 TTGGTTGGGACGTTAAGTACGCTGGTGTTCAAACCCTTGTTGCCAAGTTTTTGATGCAAG 1090 Query 903 GCAAAGCAGGAAGGCACGCGCCTGTGTTCAGGAAGTTTCAAGAGAAAGCTGATTCCTTTA 962 ||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 1091 GCAAAGCAGGACGTCACGCACCTGTGTTCAGGAAGTATCAAGAGAAAGCTGATTCCTTTA 1150 Query 963 TGTGTTCCTTGTTGGGTAAAAGCTCGAGGAACATTCAGAAGACACCTGGTGGTTTGATTT 1022 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1151 TGTGTTCCTTGTTGGGTAAAAGCTCGAGGAACATTCAGAAGACACCAGGTGGTTTGATTT 1210 Query 1023 TCAGACAACGTTGGAACAATATGCAGTTTGTCACTAGTGCTTCCTTCTTGACCACGGTTT 1082 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 1211 TCAGACAACGTTGGAACAATATGCAGTTTGTCACAAGCGCTTCCTTCTTGACCACGGTTT 1270 Query 1083 ACTCTGATTACCTTACTTCTTCGCGAAGCAACTTGAGATGTGCCGCTGGAAATGTTGCTC 1142 |||| |||||||| |||||||| ||||||||||||||||||||||| |||||||| || | Sbjct 1271 ACTCAGATTACCTAACTTCTTCTCGAAGCAACTTGAGATGTGCCGCGGGAAATGTCGCAC 1330 Query 1143 CTTCGCAGCTTCTTTCCTTTGCTAAATCTCAGGTGGATTATATTCTTGGAGATAACCCGA 1202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1331 CTTCGCAGCTTCTTTCCTTTGCTAAATCTCAGGTGGATTATATTCTTGGAGATAACCCGA 1390 Query 1203 GAGCAACCAGCTACATGGTTGGTTATGGTAACAATTTCCCTCAGAGAGTTCACCACAGAG 1262 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1391 GAGCTACCAGCTACATGGTTGGTTATGGTAACAATTTCCCTCAGAGAGTTCACCACAGAG 1450 Query 1263 GCTCCTCCATTGTCTCTGTCAAGGTCGACCGTACATTTGTCACATGCCGAGGTGGATATG 1322 |||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 1451 GCTCTTCCATCGTCTCTGTCAAGGTGGACCGTACATTTGTCACCTGCCGAGGTGGATATG 1510 Query 1323 CCACGTGGTTTAGCCGTAAAGGCAGCGACCCGAACCTTCTCACTGGCGCTATTGTAGGCG 1382 |||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| || | Sbjct 1511 CCACTTGGTTCAGCCGTAAAGGCAGTGACCCGAACCTTCTCACTGGTGCTATTGTCGGTG 1570 Query 1383 GTCCTGATGCTTACGACAATTTCGCTGACAGGAGAGATAACTATGAGCAGACTGAGCCTG 1442 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1571 GCCCTGATGCTTACGACAATTTCGCTGACAGGAGAGATAACTATGAGCAGACTGAGCCTG 1630 Query 1443 CTACTTACAACAATGCACCACTTCTTGGTGTTCTCGCTCGTCTCAGCAGTGGTCATTCCG 1502 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 1631 CTACTTACAACAATGCACCACTCCTTGGTGTTCTTGCTCGTCTCAGCAGTGGTCATTCCG 1690 Query 1503 GATATAGTCAGTTTCTTCCAGTGGTTCCTGCTCCTGTTGTCCGAAGACCAATGCCTATTC 1562 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1691 GTTATAGCCAGTTTCTTCCAGTGGTTCCTGCTCCTGTTGTCCGAAGACCAATGCCTATTC 1750 Query 1563 GTAGACCGAAAGTGACTACTCCTGTCCGAGCTTCTGGTCCAGTGGCTATAGTTCAGAGGA 1622 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct 1751 GTAGACCGAAAGTGACTACTCCAGTCCGAGCTTCTGGTCCAGTGGCTATAGTTCAGAAGA 1810 Query 1623 TAACTAGTTCATGGGTCTCAAAGGGAAGGACTTACTACAGATACTCAACAACTGTGATTA 1682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1811 TAACTAGTTCATGGGTCTCAAAGGGAAGGACTTACTACAGATACTCAACAACTGTGATTA 1870 Query 1683 ACAAATCTTCTAGACCTTTGAAAAGTCTCAACCTGTCGATCAAGAATCTCTACGGACCAA 1742 ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| Sbjct 1871 ACAAATCTTCTAGACCTCTGAAAAGTCTCAACCTTTCGATCAAGAATCTCTATGGACCAA 1930 Query 1743 TCTGGGGACTCTCGAGATCAGGAAATTCGTTCGGTTTACCCTCGTGGATGCACTCATTGC 1802 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 1931 TCTGGGGACTCTCGAGATCAGGCAACTCGTTCGGTTTACCCTCGTGGATGCACTCATTGC 1990 Query 1803 CATCCGGAAAATCCCTAGAGTTCGTCTACATTCACTCAACAACACCTGCCAATGTCGCGG 1862 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1991 CATCCGGAAAATCCCTAGAGTTCGTCTACATTCACTCAACAACACCTGCAAATGTCGCGG 2050 Query 1863 TATCGAGCTACACGTTGGCTTGA-CTAGACTACAACAACAACAT 1905 |||| |||||||| ||||||||| | |||| ||||||||||||| Sbjct 2051 TATCCAGCTACACTTTGGCTTGATC-AGACAACAACAACAACAT 2093 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94326824055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5