BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924634 Length=710 Score E Sequences producing significant alignments: (Bits) Value AT5G26110.1 | Symbols: | Protein kinase superfamily protein | ... 961 0.0 AT1G08120.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 531 5e-150 > AT5G26110.1 | Symbols: | Protein kinase superfamily protein | chr5:9117907-9119826 REVERSE LENGTH=1261 Length=1261 Score = 961 bits (520), Expect = 0.0 Identities = 586/619 (95%), Gaps = 0/619 (0%) Strand=Plus/Plus Query 72 AGGGTGTTTGAGTCTACATTTACCGGAAGAAGATCCATTGTGAAAGAACGATTCTCGAAG 131 |||||||| |||||||||||| | |||||||||||||| ||||||||||| ||||||||| Sbjct 312 AGGGTGTTCGAGTCTACATTTGCTGGAAGAAGATCCATCGTGAAAGAACGTTTCTCGAAG 371 Query 132 AAATATAGACACCCGATTTTGGATGCGAAACTCACACTCAAACGCTTGAATGCGGAGGCT 191 ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||| Sbjct 372 AAATATAGACATCCGATTTTGGATGCAAAACTCACACTTAAACGCTTGAATGCGGAAGCT 431 Query 192 AGGTGTATGACAAAGGCAAGAAAGCTCGGGGTTTGTACTCCAATCCTCTATGCTGTGGAT 251 |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 432 AGGTGTATGACAAAGGCAAGAAAGCTCGGGGTTTGTACTCCAGTCCTATATGCTGTGGAT 491 Query 252 ACTCTGCTTCACTCTTTAACACTTGAGTACATTGAGGGCGTCTCTGTTAAAGACATTTTC 311 |||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| Sbjct 492 ACTCTGCTTCACTCTTTAACACTTGAGTACATTGAGGGGGTCTCTGTTAAGGATATTTTC 551 Query 312 CTTGACTTTGGGGCCAATGGGATTATTGAGGAACGGTTAGATGATGTTGCTGCTCAGATT 371 ||||| |||||| |||||||| || |||||||||| |||||||||||||||||||||||| Sbjct 552 CTTGAGTTTGGGACCAATGGGGTTGTTGAGGAACGTTTAGATGATGTTGCTGCTCAGATT 611 Query 372 GGGGCTGCAATTGCTAAGCTCCATGATGGTGGCCTGGCTCACGGTGATTTGACTACATCA 431 ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| Sbjct 612 GGGGCTGCAATTGCTAAGCTCCATGATGGTGGCTTGGCTCATGGTGATTTGACCACATCA 671 Query 432 AATATGTTAGTCAGAAGTGGAACAAATCAGCTGGTACTAATCGATTTTGGCTTGAGTGTC 491 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 672 AATATGTTAGTCAGAAGTGGAACAAATCAGCTGGTACTAATTGATTTTGGCTTGAGCGTC 731 Query 492 ACATCGACCTTGCCTGAAGACAAAGCTGTTGATTTATATGTGCTTGAAAGAGCCTTACTC 551 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 732 ACATCGACCTTGCCTGAAGACAAAGCTGTTGATTTATATGTACTTGAAAGAGCCTTACTC 791 Query 552 TCAATGCATTCTTCATGCGGGAATGTGATGGATCGTATATTGACAGCGTATAGGAAGTCC 611 ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct 792 TCAATGCATTCGTCATGCGGGAATGTGATGGATCGTATACTGACGGCGTATAGGAAGTCC 851 Query 612 TCGAAGCAATGGTCAGCCACGTTTAACAAGCTCGCGCAAGTGAGGCAACGAGGGAGAAAA 671 || |||||||||||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct 852 TCAAAGCAATGGTCAGCCACGTTTAACAAGCTCGCACAAGTGAGACAGCGAGGGAGAAAG 911 Query 672 CGGACTATGATTGGATGAG 690 ||||||||||||||||||| Sbjct 912 CGGACTATGATTGGATGAG 930 > AT1G08120.1 | Symbols: | BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G26110.1); Has 235 Blast hits to 235 proteins in 96 species: Archae - 21; Bacteria - 0; Metazoa - 117; Fungi - 8; Plants - 47; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). | chr1:2538615-2539661 FORWARD LENGTH=1047 Length=1047 Score = 531 bits (287), Expect = 5e-150 Identities = 413/468 (88%), Gaps = 32/468 (7%) Strand=Plus/Plus Query 72 AGGGTGTTTGAGTCTACATTTACCGGAAGAAGATCCATTGTGAAAGAACGATTCTCGAAG 131 ||||| || |||||||||||| | |||||||||||||||||||||||||| ||||||||| Sbjct 139 AGGGTATTGGAGTCTACATTTTCTGGAAGAAGATCCATTGTGAAAGAACGTTTCTCGAAG 198 Query 132 AAATATAGACACCCGATTTTGGATGCGAAACTCACACTCAAACGCTTGAATGCGGAGGCT 191 |||||| | ||||||||||||||||| |||||||||||| | || | ||| Sbjct 199 AAATATCGCCACCCGATTTTGGATGCCAAACTCACACTC--A------AA--C----GCT 244 Query 192 AGGTGTATGACAAAGGCAAGAAAGCTCGGGGTTTGTACTCCAATCCTCTATGCTGTGGAT 251 ||||||||||||||||||||||| ||||||||||||||| || |||||||||||||| Sbjct 245 ---TGTATGACAAAGGCAAGAAAGCTAGGGGTTTGTACTCCAGTCATCTATGCTGTGGAT 301 Query 252 ACTCTGCTTCACTCTTTAACACTTGAGTACATTGAGGGCGTCTCTGTTAAAGACATTTTC 311 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 302 ACTCTGCTTCACTCTTTAACACTTGAGTACATTGAGGGCGTCTCTGTTAAAGACATTCTC 361 Query 312 CTTGACTTT-GGGGCCAATGGGATTATTGAGGAACGGTTAGATGATGTTGCTGCTCAGAT 370 ||||||||| ||||| |||||| || |||||||||||||||||||||||||| ||||||| Sbjct 362 CTTGACTTTTGGGGCGAATGGGGTTGTTGAGGAACGGTTAGATGATGTTGCTACTCAGAT 421 Query 371 TGGGGCTGCAATTGCTAAGCTCCATGATGGTGGCCTGGCTCACGGTGATTTGACTACATC 430 |||| | || || ||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct 422 TGGGACGGCCATCGCTAAGCTCCATGATGGTGGCTTGGCTCACGGTGATTTGACCACATC 481 Query 431 AAATATGTTAGTCAGAAGTGGAACAAATCAG-CTG---------G-T---ACTAATCGAT 476 ||||||||||||||||||||||||||||||| ||| | | |||||||||| Sbjct 482 AAATATGTTAGTCAGAAGTGGAACAAATCAGGCTGATTTAATCAGCTGGTACTAATCGAT 541 Query 477 TTTGGCTTGAGTGTCACATCGACCTTGCCTGAAGACAAAGCTGTTGAT 524 ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 542 TTTGGCTTGAGTGTCACATCGACCTTGCCTGAAGACAGAGCTGTTGAT 589 Score = 235 bits (127), Expect = 4e-61 Identities = 179/202 (89%), Gaps = 11/202 (5%) Strand=Plus/Plus Query 498 ACCTTGCCTGAAGACAAAGCTGTTGAT-T---TATAT---GTGCTTG-A-A-AGAGC-CT 546 ||||||||||||||||||||||||||| | ||||| ||| || | | | ||| | Sbjct 600 ACCTTGCCTGAAGACAAAGCTGTTGATCTAAATATATACCTTGCCTGAAGACAAAGCTGT 659 Query 547 TACTCTCAATGCATTCTTCATGCGGGAATGTGATGGATCGTATATTGACAGCGTATAGGA 606 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 660 TACTCTCAATGCATTCTTCATGCGGGAATGTGATGGATCGTATACTGACAGCGTATAGGA 719 Query 607 AGTCCTCGAAGCAATGGTCAGCCACGTTTAACAAGCTCGCGCAAGTGAGGCAACGAGGGA 666 | ||||| ||||||||||| ||||| |||||||||||||| |||||| |||||||||||| Sbjct 720 ACTCCTCAAAGCAATGGTCCGCCACATTTAACAAGCTCGCCCAAGTGCGGCAACGAGGGA 779 Query 667 GAAAACGGACTATGATTGGATG 688 |||| ||||||||||||||||| Sbjct 780 GAAAGCGGACTATGATTGGATG 801 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34410390695 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5