BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg924948 Length=574 Score E Sequences producing significant alignments: (Bits) Value AT1G60970.1 | Symbols: | SNARE-like superfamily protein | chr1... 898 0.0 > AT1G60970.1 | Symbols: | SNARE-like superfamily protein | chr1:22447848-22449526 REVERSE LENGTH=833 Length=833 Score = 898 bits (486), Expect = 0.0 Identities = 544/573 (95%), Gaps = 0/573 (0%) Strand=Plus/Plus Query 1 AGATTTCTTCACCTTACGCCATGGAATTACCCCCAAAAGTGAAAAACATTTTGCTTTTGG 60 |||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||| Sbjct 120 AGATTTCTTCTCCTTAAGCCATGGAATTGCCCCCAAAAGTGAAAAACATCTTGCTTTTGG 179 Query 61 ATTCTGAAGGAAAGCGTGTAGCGGTTAAGTATTACTCAGATGACTGGCCAACGAATTCAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 180 ATTCTGAAGGAAAGCGTGTAGCGGTTAAGTATTACTCAGATGACTGGCCAACAAATTCAG 239 Query 121 AGAAGGAAGCCTTCGAAAAATCGGTGTTCACCAAGACTCAGAAAACTAATGCTTGGACCG 180 ||||||| ||||||||||| ||||| || |||||||||||||| |||||| |||||| Sbjct 240 CTCAGGAAGCGTTCGAAAAATCCGTGTTTACAAAGACTCAGAAAACAAATGCTAGGACCG 299 Query 181 AAGTGGAAGTGACAGCATTGGAGAACAACATTGTTCTGTACAAATTTGTGCAAGATCTCC 240 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 300 AAGTGGAAGTGACAGCACTGGAGAACAACATTGTTGTGTACAAATTTGTGCAAGATCTCC 359 Query 241 ATTTCTTTGTTACGGGCGGTGAAGAGGAAAACGAGCTTATATTAGCCAGTGTGCTTGAGG 300 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 360 ATTTCTTTGTTACGGGCGGTGAAGAGGAAAACGAGCTTATCTTAGCCAGTGTGCTTGAGG 419 Query 301 GACTCTTCGATGCAGTGACCCTTCTCCTTAGAGGCAATGTTGATAAGAGAGAGGCACTGG 360 ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 420 GACTCTTTGATGCAGTGACCCTTCTCCTTAGAAGCAATGTTGATAAGAGAGAGGCACTAG 479 Query 361 ACAACCTTGATCTCATCTTCCTGTGCTTTGATGAAATTATCGATGGCGGTATTGTTCTGG 420 ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 480 ACAACCTTGATCTCATCTTTCTAAGCTTTGATGAAATTATCGATGGCGGTATTGTTCTGG 539 Query 421 AGACGGACGCAAATGTGATCGCAGGTAAAGCAGGGATCAATAGCGCTGACCCTAACGCTC 480 ||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||||| Sbjct 540 AGACGGATGCAAATGTAATAGCAGGTAAAGCAGGGATCAATAGCACTGACCCTAACGCTC 599 Query 481 CTCTATCCGAGCAGACGATAAGTCAGGCACTCGCGACTGCAAGAGAACATTTGACAAGGT 540 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 600 CTCTATCCGAGCAGACGATAAGTCAAGCACTCGCGACTGCAAGAGAACATTTGACAAGGT 659 Query 541 CACTTATGAAATGATGTGTGTGTTGCTCTTCGG 573 ||||||||||||||||||||| ||||||||||| Sbjct 660 CACTTATGAAATGATGTGTGTTTTGCTCTTCGG 692 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27578546703 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5