BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg925155
Length=2335
Score E
Sequences producing significant alignments: (Bits) Value
AT1G58520.2 | Symbols: RXW8 | lipases;hydrolases, acting on est... 2876 0.0
AT1G10090.1 | Symbols: | Early-responsive to dehydration stres... 1886 0.0
> AT1G58520.2 | Symbols: RXW8 | lipases;hydrolases, acting on ester
bonds | chr1:21729913-21738652 FORWARD LENGTH=3613
Length=3613
Score = 2876 bits (1557), Expect = 0.0
Identities = 1744/1830 (95%), Gaps = 30/1830 (2%)
Strand=Plus/Plus
Query 515 GTATAGGACCATAGCTAAAATGAGGCTTGGACATATTACTGGATGTGCCTCAAAGCCAAG 574
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1380 GTATAGCACCATAGCTAAAATGAGGCTTGGGCATATTACTGGATGTGCCTCAAAGCCAAG 1439
Query 575 TCAATTTACCGTTCTTATCCGTGCTATTCCATGGTCTCCTGAGCAATCTTACAGCGACAC 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 TCAATTTACCGTTCTTATCCGTGCTATTCCATGGTCTCCTGAGCAATCTTACAGCGACAC 1499
Query 635 ACTGAGCAAATTCTTCACAAATTACTATTCATCAAGCTATGTGTCCCACCAAATGGTCTA 694
|||||||||||||||||||| ||||| || || ||||| ||||||||||||||||||||
Sbjct 1500 GCTGAGCAAATTCTTCACAAACTACTACTCGTCCAGCTACGTGTCCCACCAAATGGTCTA 1559
Query 695 CCATAATGGTATCATTCAGAGACTGTTGCGTGAGGCGGAGAGGATGTGCCAGACTCTAAA 754
||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 1560 CCATAATGGCATCATTCAGAGACTGCTGCGTGATGCGGAGAGGATGTGCCAGACTCTAAA 1619
Query 755 ACACGTTTCTCCTGAAATCAATTGTAAACCAAGTTTGAA-GCCATGCATCTTTTGTGGAG 813
|||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||
Sbjct 1620 ACACGTTTCTCCTGAAATCAATTGTAAACCGAGTTT-AAGGCCATGCACCTTTTGTGGAG 1678
Query 814 GACCTACAGCCACAAATTCTTTTCATATCCTATCTAATGAGGCGGACAGTGTGAAAGGAA 873
||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1679 GACCTACAGCCACAAGTTCTTTTCATATCCTATCGAATGAGGCAGACAGTGTGAAAGGAA 1738
Query 874 TGGAGCTTGGTGAGTTGAC--T-A-T--GACTACGACAGAGCAAGAACGTCCAGCTGCTT 927
||||||||||||||||||| | | | |||||||||||||||||||||| |||||||||
Sbjct 1739 TGGAGCTTGGTGAGTTGACTATGACTACGACTACGACAGAGCAAGAACGTTCAGCTGCTT 1798
Query 928 TTGTGTTTTTCAAAACACGCTATGATGCTCTTGTTGTTTCAGAGGTTCTACAATCATCAA 987
|||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1799 TTGTGTTTTTTAAGACTCGCTATGATGCTCTTGTTGTTTCGGAGGTTCTACAATCATCAA 1858
Query 988 ATCCTATGCTATGGGTGACAGACTTAGCTCCAGAACCTCACGATGTGTATTGGAAGAATC 1047
|||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct 1859 ATCCTATGTTATGGGTGACAGACTTAGCCCCAGAACCTCATGATGTGTACTGGAAGAATC 1918
Query 1048 TCAACATTCCTTATCGACAACTTTGGATACGGAAAATAGCAACCCTTGTTGGTGCAGTTG 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 TCAACATTCCTTATCGACAACTTTGGATACGGAAAATAGCAACCCTTGTTGGTGCAGTTG 1978
Query 1108 CTTTCATGTTTGTGTTTCTTATTCCCGTGACCTTCATTCAAGGGCTGACTCAACTAGAGC 1167
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1979 CTTTCATGTTTGTGTTTCTTATTCCCGTTACCTTCATTCAAGGGCTGACTCAACTAGTGC 2038
Query 1168 AGCTGTCTCACGCATTTCCTTTTCTAAGAGGCATCTTGAGGAAGCAGTTTATAAGCCAGG 1227
|||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |||||
Sbjct 2039 AGCTGTCTCACGCATTTCCTTTTCTAAGAGGCATCTTGAGCAAGAACTTTATAAACCAGG 2098
Query 1228 TCATCACAGGGTACTTACCCAGTGTGATCTTGATTCTATTTTTCTATGCCGTTCCACCAT 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2099 TCATCACAGGGTACTTACCCAGTGTGATCTTGATTCTATTTTTCTATGCCGTTCCACCAT 2158
Query 1288 TGATGATGTATTTTTCGGCCTTGGAGGGATGTATTTCACGGAGTATAAGGAAGAAGAGTG 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2159 TGATGATGTATTTTTCGGCCTTGGAGGGATGTATTTCACGGAGTATAAGGAAGAAGAGTG 2218
Query 1348 CTTGCATCAAAGTCTTATATTTTACCATTTGGAATGTGTTCTTCGTGAATATTTTATCGG 1407
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2219 CTTGCATCAAAGTCTTATATTTTACCATTTGGAATGTGTTCTTCGTGAATATATTATCAG 2278
Query 1408 GGTCTGTTATCAGGCAACTGAATGTCTTTTCTAGTGTCAGAGACATACCTGCACAACTTG 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2279 GGTCTGTTATCAGGCAACTGAATGTCTTTTCTAGTGTCAGAGACATACCTGCACAACTTG 2338
Query 1468 CAAGATCAGTGCCAACACAGGCTGGCTTCTTCATGACCTATTGTTTCACATCTGGTTGGG 1527
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2339 CTAGAGCAGTGCCAACACAGGCTGGCTTCTTCATGACCTATTGTTTCACATCTGGTTGGG 2398
Query 1528 CGAGTTTGGCTTGTGAAATAATGCAGCCTATGGCTCTTATCTGGAATCTGGTAGCAAAAG 1587
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2399 CCAGTTTGGCTTGTGAAATAATGCAGCCTATGGCTCTTATCTGGAATCTGGTAGCAAAAG 2458
Query 1588 TTGTTACCAAGAACGAGGATGAGTCATATGAAACACTTAGGTTCCCATACCACACCGAAA 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2459 TTGTTACCAAGAACGAGGATGAGTCATATGAAACACTTAGGTTCCCATACCACACCGAAA 2518
Query 1648 TTCCTCGGCTGCTTTTGTTTGGGCTCCTGGGTTTCACCAATTCAGTCATAGCACCACTGA 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2519 TTCCTCGGCTGCTTTTGTTTGGGCTCCTGGGTTTCACCAATTCAGTCATAGCACCACTGA 2578
Query 1708 TACTGCCGTTTTTGCTGATATACTTTTTCCTTGCATATCTCATATACAAAAATCAGATAC 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2579 TACTGCCGTTTTTGCTGATATACTTTTTCCTTGCATATCTCATATACAAAAATCAAATAC 2638
Query 1768 TCAACGTGTATATTACAAAGTACGAAAGCGGTGGACAATACTGGCCTATTTTCCACAACA 1827
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2639 TCAACGTGTATATTACGAAGTACGAAAGCGGTGGACAATACTGGCCTATTTTCCACAACA 2698
Query 1828 CAACAATCTTTTCACTGATCTTGACACAGATTATAGCTTTGGG-TTTCTTCGGATTAAAG 1886
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 2699 CAACAATCTTTTCACTGATCTTGACACAGATTATAGCTTTGGGGTTT-TTCGGATTAAAG 2757
Query 1887 CTATCAACGGTTGCTTCGGGTTTCACTATACCATTGATTCTTCTCACTTTGCTTTTTAGT 1946
|||||||| ||||||||||||||||| ||||| || ||||||||||| || |||||||||
Sbjct 2758 CTATCAACAGTTGCTTCGGGTTTCACCATACCGTTAATTCTTCTCACGTTACTTTTTAGT 2817
Query 1947 GAGTATTGTCGGCAGAGGTTTGCGCCCATTTTCAACAAAAATCCTGCCCAGGTTCTCATA 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2818 GAGTATTGTCGGCAGAGGTTTGCGCCCATTTTCAACAAAAATCCTGCCCAGGTTCTCATA 2877
Query 2007 GATATGGACAGGGCTGATGAAATCTCAGGAAAGATGGAAGAGTTACATAAAAAATTGCAT 2066
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2878 GATATGGACAGAGCTGATGAAATATCAGGAAAGATGGAAGAGTTACATAAAAAATTGCAT 2937
Query 2067 AATGTATACTCGCAGATACCATTACACTCTGAGAAATCATCGAGTAAAGCTGAATGCAGT 2126
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 2938 AATGTATACTCGCAGATACCATTACACTCTCAGAAATCATCGAGTAAAGCTGAATGTAGT 2997
Query 2127 AATCCTTTCAAAAATCAGGAGTTACCAGATCCTGAAAAATTGAAGCCAGAGGAAGGGGAT 2186
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2998 AATCCTTTCAAAAAGCAGGAGTTACCAGATCCTGAAAAATTGAAGCCAGAGGAGGGGGAT 3057
Query 2187 GCGATAGCGAAAGAGTTATGGGGATATC-AAGGCAATGAATCTGGTCAAGAACATGACGC 2245
|||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct 3058 GCGATAGCTAAAGAGTTATGGGGAT-TCCAAGGCAATGAATCTGGTCAAGAACATGACAC 3116
Query 2246 TAAGTCCTGTCCCAGTGCTTCACCAGAGCATCTTTCTCCAAAGCTGATCGAACTTCACAA 2305
||||||||| || | | ||||||||||||| |||||||||||||||
Sbjct 3117 TAAGTCCTG----AG--C---A--------TCTTTCTCCAAAGAAGATCGAACTTCACAA 3159
Query 2306 ACGGAACTAGACAGACATTTTTTACTAGTG 2335
||||||||||||||| ||||| |||||||
Sbjct 3160 ACGGAACTAGACAGATGTTTTT-ACTAGTG 3188
Score = 669 bits (362), Expect = 0.0
Identities = 396/413 (96%), Gaps = 0/413 (0%)
Strand=Plus/Plus
Query 101 TAGGAAACAACCATCCAATTACTGTGTATATTTTGGCCGAAGGCTTGTTTGTGGTGGGGC 160
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 909 TAGGAAACAGCCAGCCAATTACTGTGTATATTTTGGCCGAAGGCTTGTTTGTGGTGGTGC 968
Query 161 TAGACGTTATGATCCGTTTTGGTATGAGAGGTTTGTGCCGTCTCCAAGTTGGCTGGTTAA 220
||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||
Sbjct 969 TAGACGTTATGATCCTTTTTGGTATGAGAGGTTTGTGCCGTCTCCAAGTTGGCTTGTGAA 1028
Query 221 AGCATGGGAAACTAGTGAAGATGAGTTATTAGCTGCTGCTGGTCTTGATGCTGTTGTCTT 280
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1029 AGCATGGGAGACTAGTGAAGACGAGTTATTAGCTGCTGCTGGTCTTGATGCTGTCGTCTT 1088
Query 281 CCTTAGGATGGTCCTTTTCAGCATTCGTATTTTCTTTATAGTTGCTGTTATTTGCATTGC 340
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1089 CCTTAGGATGGTCATTTTCAGCATTCGTATTTTCTTTATAGTTGCTGTTATTTGCATTGC 1148
Query 341 CTTTGTACTGCCTGTTAATTATTATGGGCAACCGATGGTGCATAAGGAAATCCATTTGGA 400
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 CTTTGTGCTGCCTGTTAATTATTATGGGCAACCGATGGTGCATAAGGAAATCCATTTGGA 1208
Query 401 GTCATCCGAAGTGTTCACAATCGAAAATCTTAAAGAAGGCTCCAAATGGCTGTGGGTTCA 460
||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1209 GTCATCCGAAGTGTTTACAATTGAAAATCTTAAAGAAGGCTCAAAATGGCTGTGGGTTCA 1268
Query 461 TTGTCTTGCACTGTACATTATAACCTCAGCGGCATGTCTTCTTCTTTATTTTG 513
|||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct 1269 TTGTCTTGCACTGTACATTATAACCTCAGCGGCATGTCTTCTGCTCTACTTTG 1321
> AT1G10090.1 | Symbols: | Early-responsive to dehydration stress
protein (ERD4) | chr1:3290311-3296198 REVERSE LENGTH=2910
Length=2910
Score = 1886 bits (1021), Expect = 0.0
Identities = 1888/2298 (82%), Gaps = 94/2298 (4%)
Strand=Plus/Plus
Query 17 TGAGATGGA-GATATCAGCTCTTCTT-ACATCTGCCGGGATTAATATCTCGATATGCATA 74
||||||||| | | ||||| ||| || || ||||| ||||||||||| |||||||| ||
Sbjct 357 TGAGATGGATG-TCTCAGCACTT-TTAACGTCTGCTGGGATTAATATAGCGATATGCGTA 414
Query 75 GTGCTTTTGTCACTTTATTCTATACTTAGGAAA-CAACCATCCAATTACTGTGTATATTT 133
|||||| | || |||||||| || | || |||| || ||| ||||||| ||||| || ||
Sbjct 415 GTGCTTGTATCGCTTTATTCCATTC-TACGAAAGCAGCCAGCCAATTATTGTGTTTACTT 473
Query 134 TGGCCGAAGGCTTGTTTG-TGGTGGGGCTAGACGTTATGATCCGT-TTTGGTATGAGAGG 191
||| ||| |||| | || || | | || |||| ||||||| | |||||||||||||
Sbjct 474 TGGTCGATTGCTT-TCTGACGGAAGAGTTAAACGTCATGATCC-TCGTTGGTATGAGAGG 531
Query 192 TTTGTGCCGTCTCCAAGTTGGCTGGTTAAAGCATGGGAAACTAGTGAAGATGAGTTATTA 251
|| | ||| ||||| |||||||| || ||||| |||||||| | ||| || ||| | ||
Sbjct 532 TTCGCGCCCTCTCCTAGTTGGCTCGTGAAAGCTTGGGAAACCACTGAGGAAGAGATGTTG 591
Query 252 GCTGCTGCTGGTCTTGATGCTGTTGTCTTCCTTAGGATGGTCCTTTTCAGCATTCGTATT 311
|||||||||||||| |||||||| || ||| | ||||||||| ||| |||||||||||||
Sbjct 592 GCTGCTGCTGGTCTGGATGCTGTGGTTTTCATCAGGATGGTCATTTGCAGCATTCGTATT 651
Query 312 TTCTTTATAGTTGCTGTTATTTGCATTGCCTTTGTACTGCCTGTTAATTATTATGGGCAA 371
|||| || || || || ||||| |||||||||| | |||||||| |||||||| |||
Sbjct 652 TTCTCAATCGTCGCAGTCGTTTGCCTTGCCTTTGTGTTACCTGTTAACTATTATGGACAA 711
Query 372 CCGATGGTGCATAAGGAAATCCATTTGGAGTCATCCGAAGTGTTCACAATCGAAAATCTT 431
||||| ||| |||||| ||||||||||||||| | ||| |||||||| || || |||
Sbjct 712 AAGATGGAGCACAAGGAAGTCCATTTGGAGTCATTGGGAGTATTCACAATTGAGAACCTT 771
Query 432 AAAGAAGGCTCCA-AATGGCTGTGGGTTCATTGTCT-TGCACTGTACATTATAACCTCAG 489
|| | ||| || |||||| |||||||||||||| | || ||||||| ||| |||| |
Sbjct 772 AATCCACGCT-CACGATGGCTCTGGGTTCATTGTCTCT-CATTGTACATCATATCCTCTG 829
Query 490 CGGCATGT-CTTCTTCTTTATTTTGAGTATAGGACCATAGCTAAAATGAGGCTTGGACAT 548
| |||||| | ||||||||| |||||||||| || |||||| |||| |||||||| |||
Sbjct 830 CAGCATGTGC-TCTTCTTTACTTTGAGTATAAGAACATAGCCAAAAAGAGGCTTGCCCAT 888
Query 549 ATTACTGGATGTGCCTCAAAGCCAAGTCAATTTACCGTTCTTATCCGTGCTATTCCAT-G 607
|||| ||||| |||||||||||||||||| ||||| |||||||| ||||||||||| |
Sbjct 889 ATTAGTGGATCTGCCTCAAAGCCAAGTCATTTTACTGTTCTTATTCGTGCTATTCC-TCA 947
Query 608 GTCTCCTGAGCAATCTTACAGCGACACACTGAGCAAATTCTTCACAAATTACTATTCATC 667
||||||||| || || |||||||| ||| ||||||||| ||| |||||||||||| || |
Sbjct 948 GTCTCCTGACCAGTCCTACAGCGAGACAGTGAGCAAATACTTTACAAATTACTATGCACC 1007
Query 668 AAGCTATGTGTCCCACCAAATGGTCTACCATAATGG-TATCATTCAGAGACTGTTGCGTG 726
|||||||||||| |||| ||||||||||| | |||| | ||||||| |||||| || ||
Sbjct 1008 AAGCTATGTGTCGCACCTAATGGTCTACCGTGATGGCT-TCATTCACAGACTGATGAATG 1066
Query 727 AGGCGGAGAGGATGTGCCAGACTCTAAAACACGTTTCTCCTGAAATCAA-TTGTAAACCA 785
|| ||||||||||||| ||| || ||||||| |||||||||| | | || |||||| ||
Sbjct 1067 AGACGGAGAGGATGTGTCAGGCTATAAAACATGTTTCTCCTG-ATTTAAGTTGTAATCCG 1125
Query 786 AGTTTGAAGCCATGCATCTTTTGTGGAGGACCTACAGCCACAAATTCTTTTCATATCCTA 845
||||||||| ||||| || ||||| |||||| ||||||||||||||||||| ||| |
Sbjct 1126 AGTTTGAAGTCATGCGTCCTTTGT---GGACCTGCAGCCACAAATTCTTTTCAAATCATC 1182
Query 846 TCTAATGAGGCGGACAGTGTGAAAGGAATGGAGCTTGGTGAGTTGACTATGACTACGACA 905
|| || ||| | |||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 1183 TCGAACGAGACAGACAGTGTCAAAGGATTGGAGCTTGGTGAGTTGACTTTGACTACGACA 1242
Query 906 GAGCAAGAACGTCCAGCTGCTTTTGTGTTTTTCAAAACACGCTATGATGCTCTTGTTGTT 965
||| |||||||||| | |||||||||||||||||| | || ||||||||||||||||||
Sbjct 1243 GAGGAAGAACGTCCCGTTGCTTTTGTGTTTTTCAAGAGTCGTTATGATGCTCTTGTTGTT 1302
Query 966 TCAGAGGTTCTACAATCATCAAATCCTATGCTATGGGTGACAGACTTAGCTCCAGAACCT 1025
||||| ||||| ||| || ||||||||||| |||||||| ||||||| |||||||| |||
Sbjct 1303 TCAGAAGTTCTTCAAACACCAAATCCTATGTTATGGGTGGCAGACTTGGCTCCAGAGCCT 1362
Query 1026 CACGATGTGT-ATTGGAAG-AATCTCA-ACATTCCTTATCGACAACTTTGGATACGGAA- 1081
|| ||||| | | ||| || ||||||| | || |||||||| || |||||||| | |||
Sbjct 1363 CATGATGT-TCACTGG-AGAAATCTCAGA-ATACCTTATCGGCAGCTTTGGATGC-GAAG 1418
Query 1082 AATAGCAACCCTTGTTGGTGCAGTTGCTTTCATGTTTGTGTTTCTTATTCCCGTGACCTT 1141
|||||||||||||||||||||| |||| |||||||||||||||||| |||| || |||||
Sbjct 1419 AATAGCAACCCTTGTTGGTGCAATTGCCTTCATGTTTGTGTTTCTTTTTCCTGTTACCTT 1478
Query 1142 CATTCAAGGGCTGACTCAACTA-GAGCAGCTGTCTCACGCA-TTTCCTTTTCTAAGAGGC 1199
|||||||||||||||||||| | | | | || || | | ||||||||||||| || |
Sbjct 1479 TGTTCAAGGGCTGACTCAACTACCAAC-GTTATC-CAAGAATTTTCCTTTTCTAAAAGAC 1536
Query 1200 ATCTTGAGGA-AGCA-GTTTAT-AAGCCAGGTCATCACAGGGTACTTACCCAGTGTGATC 1256
|||||| | || | |||||| || ||||||||||||||||| ||||| ||||||||
Sbjct 1537 CTCTTGA--ACAGGAGGTTTATGGAG-CAGGTCATCACAGGGTATTTACCAAGTGTGATT 1593
Query 1257 TTGATTCTATT-TTTCTATGCCGTTCCACCATTGATGATGTATTTTTCGGCCTTGGAGGG 1315
||| ||||||| ||| ||| ||||||| |||||||||||||| ||||| ||||||||||
Sbjct 1594 TTGGTTCTATTCTTT-TATACCGTTCCGCCATTGATGATGTACTTTTCAACCTTGGAGGG 1652
Query 1316 ATGTATTTCACGGAGT-ATAAGGAAGAAGAGTGCTTG-CATCAAAGTCTTATATTTTACC 1373
|||| |||| |||||| | ||| || || ||||| || | ||||| | ||||| || |||
Sbjct 1653 ATGTGTTTCTCGGAGTCA-AAGAAAAAAAAGTGCATGTC-TCAAAATTTTATACTTCACC 1710
Query 1374 ATTTGGAATGTGTTCTTCGTGAATATTTTATCGGGGTCTGTTATCAGGCAACTGAATGTC 1433
|| ||||||||||||||||| |||||| |||| || |||||||||||||| | | |||
Sbjct 1711 ATCTGGAATGTGTTCTTCGTCAATATTCTATCAGGCTCTGTTATCAGGCAGTTTACCGTC 1770
Query 1434 TTTTCTAGTGTCAGAGACATACCTGCACAACTTGC-AAGATC-AGTGCCAACACAGGCTG 1491
|| |||||| || ||| |||||||||||||||| || | | || ||| |||||||||
Sbjct 1771 TTGAATAGTGTGAGGGACGTACCTGCACAACTTGCGAA-A-CTTGTTCCAGCACAGGCTG 1828
Query 1492 GCTTCTTCATGACCTATTGTTTCACATCTGGTTGGGC-GAGTTTGGCTTGTGAAATAATG 1550
||||||||||||||||||||||||| ||||||||||| | ||||||| |||||||| |||
Sbjct 1829 GCTTCTTCATGACCTATTGTTTCACGTCTGGTTGGGCCG-GTTTGGCATGTGAAATCATG 1887
Query 1551 CAGCCTAT-GGCTCTTATCTGGAATCTGGTAGCAAAAGTTGTTACCAAGAACGAGGATGA 1609
|| ||| | || |||||| ||||||||| | ||||||||| || |||||| |||| ||
Sbjct 1888 CAACCTGTAGG-TCTTATTTGGAATCTGATTGCAAAAGTTATTGTTAAGAACAAGGAGGA 1946
Query 1610 GTCATATGAAACACTTAGGTT-CCCATACCACACCGAAATTCCTCGGCTGCTTTTGTTTG 1668
||||||||||||||||||||| ||| ||||| || |||||||| | || |||||||| |
Sbjct 1947 GTCATATGAAACACTTAGGTTTCCC-TACCATACAGAAATTCCAAGACTACTTTTGTTCG 2005
Query 1669 GGCTCCTGGGTTTCACCAATTCAGTCATAGCACCACTGATACTGCCGTTTTTGCTGATAT 1728
||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||| |
Sbjct 2006 GGCTCCTGGGTTTCACCAATTCAGTCATAGCGCCTCTGATACTGCCGTTTCTGCTGATCT 2065
Query 1729 ACTTTTTCCTT-GCATATCTCATATACAAAAATCAGATACTCAACGTGTATATTACAAAG 1787
|||||||| || |||||||| |||||||||||||||||| ||||||| ||||||||||||
Sbjct 2066 ACTTTTTC-TTCGCATATCTTATATACAAAAATCAGATAATCAACGTCTATATTACAAAG 2124
Query 1788 TACGAAAGCGGTGGACAATACTGGCCTATTTTCCACAACACAACAATCTTTTCACTGATC 1847
|| ||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||
Sbjct 2125 TATGAAAGCGGTGGACAATATTGGCCTGTTTTTCACAACACTACAATCTTTTCACTGATC 2184
Query 1848 TTGACACA-GATTATAGCTTTGGG-TTTCTTCGGATTAAAGCTATCAACGGTTGCTTCGG 1905
||| | || | |||||||| | || ||| ||||| ||||||||||||||||||||||| |
Sbjct 2185 TTGTCGCAAG-TTATAGCTCTAGGCTTT-TTCGGGTTAAAGCTATCAACGGTTGCTTCAG 2242
Query 1906 GTTTCACTATACCATTGATTCTTCTCACT-TTGCTTTTTAGTGAGTATTGTCGGCAGAGG 1964
||||||| || || || || ||||||||| || || |||||||||||||| ||||| |||
Sbjct 2243 GTTTCACCATCCCGTTAATCCTTCTCACTCTT-CTATTTAGTGAGTATTGCCGGCAAAGG 2301
Query 1965 TTTGCGCCCATTTTCAACAAAAATCCTGCCCAGGTTCTCATAGATATGGACAGGGCTGAT 2024
||||||||||| ||| | ||| |||| ||| || |||| || | ||||||||| || |||
Sbjct 2302 TTTGCGCCCATATTCCAGAAATATCCAGCCGAGATTCTTATCGCTATGGACAGAGCAGAT 2361
Query 2025 GAAATCTCAGGAAAGATGGAAGAGTTACATAAAAAATTGCATAA-T-GTATACTCGCAGA 2082
|| || ||||||||||||||||| ||||||| || ||| | || | | |||||| ||||
Sbjct 2362 GAGATGACAGGAAAGATGGAAGAGATACATAACAACTTG-A-AAGTTGCATACTCTCAGA 2419
Query 2083 TACCATTACAC-T-CTGA-GAAATCATCGAGTAAAGCTGAATGCAGTAATCCTTTCAAAA 2139
||||| || | |||| ||| || | || ||||||| |||| | ||||| | |
Sbjct 2420 TACCA--ACGTGTTCTGAAGAA-TC--C-AGCAAAGCTGGTTGCACTTCTCCTTGCTCAG 2473
Query 2140 ATCAGGAGTTACCAGATCCTGAAAAATTGAAGCCAGAGGAAGGGGATGCG-ATAGC-GAA 2197
||||||||||||||||| ||||| | |||||||| ||| ||| | || | | ||| ||
Sbjct 2474 ATCAGGAGTTACCAGATTCTGAAGAGTTGAAGCCTGAGAAAGAGAAT-CTTAAAGCTGAT 2532
Query 2198 -AGAGTTATGGG-GATATCAAG-GCAA-TGAATCTGGTCAAGAACATGACGCT-AAGTCC 2252
| | | ||||| | | || || | || | ||||||||| || | ||| | | || |||
Sbjct 2533 TACA-T-ATGGGAG-T-TCCAGAG-AAGTAAATCTGGTCTTGATCTTGAGG-TGAAATCC 2586
Query 2253 TGTCCCAGTGCTTCACCA 2270
|||||||||||||| |||
Sbjct 2587 TGTCCCAGTGCTTCCCCA 2604
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115913058405
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5