BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925541 Length=405 Score E Sequences producing significant alignments: (Bits) Value ATCG00440.1 | Symbols: NDHC | NADH:ubiquinone/plastoquinone oxi... 660 0.0 > ATCG00440.1 | Symbols: NDHC | NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein | chrC:50001-50363 REVERSE LENGTH=363 Length=363 Score = 660 bits (357), Expect = 0.0 Identities = 361/363 (99%), Gaps = 0/363 (0%) Strand=Plus/Plus Query 22 ATGTTTCTGCTTTACGAATATGATATTTTCTGGGCATTTTTACTAATATCAAGTGCTATT 81 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGTTTCTGCTTTACGAATATGATATTTTCTGGGCATTTTTACTAATATCAAGTGCTATT 60 Query 82 CCTGTTTTGGCATTTCTAATTTCCGGAGTTTTATCTCCAATTAGGAAGGGGCCGGAGAAA 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CCTGTTTTGGCATTTCTAATTTCCGGAGTTTTATCTCCAATTAGGAAGGGGCCGGAGAAA 120 Query 142 CTTTCTAGTTATGAATCAGGTATAGAACCGATCGGGGATGCTTGGTTACAATTTAGAATC 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTTTCTAGTTATGAATCAGGTATAGAACCGATCGGGGATGCTTGGTTACAATTTAGAATC 180 Query 202 CGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAACTGTTTTTCTGTAT 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CGTTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAACTGTTTTTCTGTAT 240 Query 262 CCGTGGGCAATGAGTTTCGATGTACTGGGGGCATCTGCTTTTATAGAAGCTTTCATTTTC 321 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 241 CCGTGGGCAATGAGTTTCGATGTACTGGGGGTATCTGCTTTTATAGAAGCTTTCATTTTC 300 Query 322 GTGCTTATCCTAATTCTTGGTTTAGTTTATGCATGGCGAAAAGGAGCATTGGAGTGGTCT 381 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 301 GTGCTTATCCTAATTCTTGGTTTAGTTTATGCATGGCGAAAAGGAGCATTGGAATGGTCT 360 Query 382 TAG 384 ||| Sbjct 361 TAG 363 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19152012369 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5