BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg925797
Length=788
Score E
Sequences producing significant alignments: (Bits) Value
AT1G66390.1 | Symbols: ATMYB90, PAP2, MYB90 | myb domain protei... 1160 0.0
AT1G56650.1 | Symbols: PAP1, MYB75, SIAA1, ATMYB75 | production... 778 0.0
AT1G66370.1 | Symbols: MYB113, AtMYB113 | myb domain protein 11... 601 4e-171
AT1G66380.1 | Symbols: MYB114, AtMYB114 | myb domain protein 11... 555 3e-157
AT1G56640.1 | Symbols: | pseudogene, similar to An2 truncated ... 161 8e-39
> AT1G66390.1 | Symbols: ATMYB90, PAP2, MYB90 | myb domain protein
90 | chr1:24763957-24765541 FORWARD LENGTH=986
Length=986
Score = 1160 bits (628), Expect = 0.0
Identities = 737/790 (93%), Gaps = 6/790 (1%)
Strand=Plus/Plus
Query 3 TTATATTTATCTTTGCTCCATGGAAGGTTCGTCGAAAGGGTTAAGAAAAGGTGCATGGAC 62
||| |||| |||||| |||||||| |||||||| |||||||| || ||||||||||||||
Sbjct 78 TTA-ATTTTTCTTTGGTCCATGGAGGGTTCGTCCAAAGGGTTGAGGAAAGGTGCATGGAC 136
Query 63 TGCTGAAGAAGATAGTCTCTTGAGGCAATGTATTGATAAGTATGGAGAAGGCAAATGGCA 122
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 137 TGCTGAAGAAGATAGTCTCTTGAGGCTATGTATTGATAAGTATGGAGAAGGCAAATGGCA 196
Query 123 CCAAGTTCCTTTGAGAGCTGGGCTAAACCGGTGCAGAAAGAGTTGTAGACTAAGATGGTT 182
|||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 197 TCAAGTTCCTTTGAGAGCTGGGCTAAATCGATGCAGAAAGAGTTGTAGACTAAGATGGTT 256
Query 183 AAACTATTTAAAGCCAAGTATCAAGAGGGGAAGATTTAGCTCTGATGAAGTTGATCTTCT 242
|||||||| ||||||||||||||||| |||||| ||||| ||||||||||||||||||
Sbjct 257 GAACTATTTGAAGCCAAGTATCAAGAGAGGAAGACTTAGCAATGATGAAGTTGATCTTCT 316
Query 243 TCTTCGCCTTCATAAGCTTCTCGGAAATAGGTGGTCCCTGATTGCTGGTCGATTGCCTGG 302
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 317 TCTTCGCCTTCATAAGCTTCTAGGAAATAGGTGGTCCTTGATTGCTGGTCGATTGCCTGG 376
Query 303 TCGGACTGCTAATGATGTCAAAAATTACTGGAACACCCATCTAAGTAAGAAACATGA-AC 361
|||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 377 TCGGACCGCTAATGATGTCAAAAATTACTGGAACACCCATCTGAGTAAAAAACATGAGTC 436
Query 362 --CATGTTGTAAGACTaaaatgaaaaagaaaaaCATCATTTCCCCTCCTACAACACCGGT 419
| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 437 TTCGTGTTGTAAGTCTAAAATGAAAAAGAAAAACATTATTTCCCCTCCTACAACACCGGT 496
Query 420 CCAAAAAATCGATGTTTTTAAGCCTCGACCTCGATCCTTCTCCGTAAACAATGGCTGTAG 479
||||||||||| |||||||||||||||||||||||||||||| || |||||||| || ||
Sbjct 497 CCAAAAAATCGGTGTTTTTAAGCCTCGACCTCGATCCTTCTCTGTTAACAATGGTTGCAG 556
Query 480 CCATCTCAGTGGTCTACCAGAAGTTGATTTAATTCCTTCCTGCCTTGGACTCAACAACAA 539
|||||||| |||||| ||||||||||||||||||||||| |||||||||||||| || ||
Sbjct 557 CCATCTCAATGGTCTGCCAGAAGTTGATTTAATTCCTTCATGCCTTGGACTCAAGAAAAA 616
Query 540 TAATGTTTGTGAAAATAGTATCACATGTAACAAAGATGATGAGAAAGATGATTTTGTGAA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 617 TAATGTTTGTGAAAATAGTATCACATGTAACAAAGATGATGAGAAAGATGATTTTGTGAA 676
Query 600 TAATCTAATGAATGGAGATAATATGTGGTTGGAGAATTTACTAGAGGAGAGCCAAGAAGC 659
|||||||||||||||||||||||||||||||||||||||||| | ||| | |||||||||
Sbjct 677 TAATCTAATGAATGGAGATAATATGTGGTTGGAGAATTTACTGGGGGAAAACCAAGAAGC 736
Query 660 AGATGCGATAGTTCC-GAAAGCAACGACAACTGAAGAGGGGGCCACTTTGGCGTTTGACC 718
|||||||| ||||| ||| || |||||| ||||| | |||||||||||||||||||||
Sbjct 737 TGATGCGATTGTTCCTGAA-GCGACGACAGCTGAACATGGGGCCACTTTGGCGTTTGACG 795
Query 719 TTGAGCAACTTTGGAGTCTGTTTGATGGAGAGACTGTGGAACTTGATTAGTGTTTCTCAC 778
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 796 TTGAGCAACTTTGGAGTCTGTTTGATGGAGAGACTGTTGAACTTGATTAGTGTTTCTCAC 855
Query 779 CGTTTGTTTA 788
||||||||||
Sbjct 856 CGTTTGTTTA 865
> AT1G56650.1 | Symbols: PAP1, MYB75, SIAA1, ATMYB75 | production
of anthocyanin pigment 1 | chr1:21233595-21235137 REVERSE
LENGTH=914
Length=914
Score = 778 bits (421), Expect = 0.0
Identities = 673/793 (85%), Gaps = 23/793 (3%)
Strand=Plus/Plus
Query 6 TATTTATCTTTGCTCCATGGAAGGTTCGTCGAAAGGGTTAAGAAAAGGTGCATGGACTGC 65
||| |||||||| |||||||| |||||||| |||||| | |||||||||| |||||| |
Sbjct 33 TATCTATCTTTGTTCCATGGAGGGTTCGTCCAAAGGGCTGCGAAAAGGTGCTTGGACTAC 92
Query 66 TGAAGAAGATAGTCTCTTGAGGCAATGTATTGATAAGTATGGAGAAGGCAAATGGCACCA 125
||||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||
Sbjct 93 TGAAGAAGATAGTCTCTTGAGACAGTGCATTAATAAGTATGGAGAAGGCAAATGGCACCA 152
Query 126 AGTTCCTTTGAGAGCTGGGCTAAACCGGTGCAG-AAAGAGTTGTAGACTAAGATGGTTAA 184
||||||| | ||||||||||||||||||||||| ||| ||||||||| |||||||||| |
Sbjct 153 AGTTCCTGTAAGAGCTGGGCTAAACCGGTGCAGGAAA-AGTTGTAGATTAAGATGGTTGA 211
Query 185 ACTATTTAAAGCCAAGTATCAAGAGGGGAAGATTTAGCTCTGATGAAGTTGATCTTCTTC 244
||||||| ||||||||||||||||| |||| | |||||||||||||||| ||||||||||
Sbjct 212 ACTATTTGAAGCCAAGTATCAAGAGAGGAAAACTTAGCTCTGATGAAGTCGATCTTCTTC 271
Query 245 TTCGCCTTCATAAGCTTCTCGGAAATAGGTGGTCCCTGATTGCTGGTCGATTGCCTGGTC 304
|||||||||||| |||||| || ||||||||||| | |||||||| |||| |||||||
Sbjct 272 TTCGCCTTCATAGGCTTCTAGGGAATAGGTGGTCTTTAATTGCTGGAAGATTACCTGGTC 331
Query 305 GGACTGCTAATGATGTCAAAAATTACTGGAACACCCATCTAAGTAAGAAACATGAACCAT 364
|||| || ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| |
Sbjct 332 GGACCGCAAATGACGTCAAGAATTACTGGAACACTCATCTGAGTAAGAAACATGAACCGT 391
Query 365 GTTGTAAGACTaaa-atgaaaaagaaaaaCATCATTTCCCCT-CCTACAACACCGGTC-C 421
||||||||| |||| |||||||||| | |||| | ||| | ||||||||||||| | |
Sbjct 392 GTTGTAAGA-TAAAGATGAAAAAGAGAGACATTACG-CCCATTCCTACAACACCGG-CAC 448
Query 422 -AAAAAATCGATGTTTTTAAGCCTCGACCTCGATCCTTCTCCGTAAACAATGGCTGTAGC 480
|||||| | |||||| |||||||||||||||||||||| | || ||||| | ||| | |
Sbjct 449 TAAAAAA-CAATGTTTATAAGCCTCGACCTCGATCCTTCACAGTTAACAACGACTGCAAC 507
Query 481 CATCTCAGTGGTCTACCAGAAGTTGAT-TTAATTCCTTCC-TGCCTTGGACTCAACAACA 538
||||||| || | |||| ||||||| ||||| ||| || ||||||||||| |||| ||
Sbjct 508 CATCTCAATGCCCCACCAAAAGTTGACGTTAAT-CCT-CCATGCCTTGGACTTAACATCA 565
Query 539 ATAATGTTTGTGAAAATAGTATCACATGTAACAAAGATGATGA-GAAAGATGATTTTGTG 597
||||||||||||| |||||||||| || ||||||||| | || |||||| | | |||
Sbjct 566 ATAATGTTTGTGACAATAGTATCATATACAACAAAGATAA-GAAGAAAGACCAACTAGTG 624
Query 598 AATAATCTAAT-GAATGGAGATAATATGTGGTTGGAGAATTTACTAGAGGAGAGCCAAGA 656
|||||| | || || |||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct 625 AATAATTTGATTGA-TGGAGATAATATGTGGTTAGAGAAATTCCTAGAGGAAAGCCAAGA 683
Query 657 AGCAGATGCGATAGTTCC-GAAAGCAACGACAACTGAAGAGGGGGCCACTTTGGCGTTTG 715
| |||| | ||||| ||| || |||||||| ||| |||||| ||| ||||| ||||
Sbjct 684 GGTAGATATTTTGGTTCCTGAA-GCGACGACAACAGAAAAGGGGGACACCTTGGCTTTTG 742
Query 716 ACCTTGAGCAACTTTGGAGTCTGTTT-GATGGAGAGACTGTGGAACTTGATTAGTGTTTC 774
|| |||| |||||||||||||| ||| ||||||||||||||| || ||||||||||||||
Sbjct 743 ACGTTGATCAACTTTGGAGTCT-TTTCGATGGAGAGACTGTGAAATTTGATTAGTGTTTC 801
Query 775 TCACCGTTTGTTT 787
|| |||||||
Sbjct 802 GAACA-TTTGTTT 813
> AT1G66370.1 | Symbols: MYB113, AtMYB113 | myb domain protein
113 | chr1:24753634-24754604 FORWARD LENGTH=741
Length=741
Score = 601 bits (325), Expect = 4e-171
Identities = 531/628 (85%), Gaps = 23/628 (4%)
Strand=Plus/Plus
Query 37 AAAGGGTTAAGAAAAGGTGCATGGACTGCTGAAGAAGATAGTCTCTTGAGGCAATGTATT 96
|||||||| ||||||||| |||||||| |||||||||||| ||||||||||||||| |||
Sbjct 16 AAAGGGTTGAGAAAAGGTACATGGACTACTGAAGAAGATATTCTCTTGAGGCAATGCATT 75
Query 97 GATAAGTATGGAGAAGGCAAATGGCACCAAGTTCCTTTGAGAGCTGGGCTAAACCGGTGC 156
|||||||||||||||||||||||||| | ||||||||| ||| |||| || || ||||||
Sbjct 76 GATAAGTATGGAGAAGGCAAATGGCATCGAGTTCCTTTAAGAACTGGTCTCAATCGGTGC 135
Query 157 AGAAAGAGTTGTAGACTAAGATGGTTAAACTATTTAAAGCCAAGTATCAAGAGGGGAAGA 216
|||||||||||||||| |||||||| || ||||| ||||||||||| ||||| |||| |
Sbjct 136 CGAAAGAGTTGTAGACTTAGATGGTTGAATTATTTGAAGCCAAGTATTAAGAGAGGAAAA 195
Query 217 -TTTAGCTCTGATGAAGTTGATCTTCTTCTTCGCCTTCATAAGCTTCTCGGAAATAGGTG 275
| | |||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||
Sbjct 196 CTCT-GCTCCGATGAAGTTGATCTTGTTCTTCGCCTTCATAAACTTCTAGGAAATAGGTG 254
Query 276 GTCCCTGATTGCTGGTCGATTGCCTGGTCGGACTGCTAATGATGTCAAAAATTACTGGAA 335
|||| |||| |||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 255 GTCCTTGATCGCTGGTAGATTGCCTGGTCGGACTGCTAATGATGTCAAGAATTACTGGAA 314
Query 336 CACCCATCTAAGTAAGAA--AC-ATGAACCATGTTGTAAGACTaaaatgaaaaagaaaaa 392
||| ||| | |||||||| || |||||| ||| |||||||| || |||| ||| |||||
Sbjct 315 CACTCATTTGAGTAAGAAGCACGATGAACGATGCTGTAAGACGAAGATGATAAACAAAAA 374
Query 393 CATCATTTCCCCTCCTACAACACCGGTCCAAAAAATCGATGTTTTTAAGCCTCGACCTCG 452
||| | ||| | |||||| || ||| |||||||||||||||||| |||||||| |||||
Sbjct 375 CATTACTTCTCATCCTACTTCATCGGCCCAAAAAATCGATGTTTTAAAGCCTCGGCCTCG 434
Query 453 ATCCTTCTCCG-TAAACAATGGCTGTAGCCATCTCAGTGGTCTA-CCAGAAGTTGAT-TT 509
||||||||||| |||| ||| | || | | || ||| | ||| ||| ||||||| ||
Sbjct 435 ATCCTTCTCCGATAAA-AATAGTTGCAACGATGTCAATA-TCTTGCCAAAAGTTGACGTT 492
Query 510 AATTCCTTC-C-TGCCTTGGACTCAACAACAATAATGTTTGTGAAAATAGTATCACATGT 567
|||||| | | | ||||||||||||||||| |||||||||||| |||||| ||||||
Sbjct 493 G-TTCCTTTACAT-C-TTGGACTCAACAACAATTATGTTTGTGAAAGTAGTATTACATGT 549
Query 568 AACAAAGATGATG-AGAAAGATGATTTTGTGAATA--A-TCTAATGAATGGAGATAATAT 623
||||||||||| | | |||||| | || | |||| | |||| || |||||||||||||
Sbjct 550 AACAAAGATGA-GCAAAAAGATAAGCTTATTAATATTAATCTATTGGATGGAGATAATAT 608
Query 624 GTGGTTGGAGAA-TTTACTAGAGG-AGA 649
||||| ||| || |||||| |||| |||
Sbjct 609 GTGGTGGGA-AAGTTTACTGGAGGCAGA 635
> AT1G66380.1 | Symbols: MYB114, AtMYB114 | myb domain protein
114 | chr1:24757413-24758490 FORWARD LENGTH=420
Length=420
Score = 555 bits (300), Expect = 3e-157
Identities = 381/420 (91%), Gaps = 6/420 (1%)
Strand=Plus/Plus
Query 22 ATGGAAGGTTCGTCGAAAGGGTTAAGAAAAGGTGCATGGACTGCTGAAGAAGATAGTCTC 81
||||| |||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGGGTTCGTCCAAAGGGTTGAGGAAAGGTGCATGGACTGCTGAAGAAGATAGTCTC 60
Query 82 TTGAGGCAATGTATTGATAAGTATGGAGAAGGCAAATGGCACCAAGTTCCTTTGAGAGCT 141
|||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 61 TTGAGGCAGTGTATTGGTAAGTATGGAGAAGGCAAATGGCATCAAGTTCCTTTAAGAGCT 120
Query 142 GGGCTAAACCGGTGCAG-AAAGAGTTGTAGACTAAGATGGTTAAACTATTTAAAGCCAAG 200
|||||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 121 GGGCTAAATCGGTGCAGGAAA-AGTTGTAGACTAAGATGGTTAAACTATTTGAAGCCAAG 179
Query 201 TATCAAGAGGGGAAGATTTAGCTCTGATGAAGTTGATCTTCTTCTTCGCCTTCATAAGCT 260
||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 180 TATCAAGAGAGGAAAATTTAGTTCTGATGAAGTTGATCTTCTTCTTCGTCTTCATAAGCT 239
Query 261 TCTCGGAAATAGGTGGTCCCTGATTGCTGGTCGATTGCCTGGTCGGACTGCTAATGATGT 320
||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||
Sbjct 240 TCTAGGAAATAGGTGGTCCTTGATTGCTGGTCGATTACCTGGTCGGACCGCTAATGATGT 299
Query 321 CAAAAATTACTGGAACACCCATCTAAGTAAGAAACATGAACCATGTTGTAAGACTaaaat 380
||| || ||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||
Sbjct 300 CAAGAACTACTGGAACACCCATCTGAGTAAGAAGCATGAACCGTGTTGTAAAACTAAGAT 359
Query 381 gaaaaagaa-aaaCATCATTTCCCCTCCTACA-ACACCGGTCCAAAAAATCGATGTTTTT 438
|||||| | ||| || || ||||||||| | ||||||| ||||||| ||||| |||||
Sbjct 360 -AAAAAGGATAAATATTATAACCCCTCCTA-ATACACCGGCCCAAAAAGTCGATATTTTT 417
> AT1G56640.1 | Symbols: | pseudogene, similar to An2 truncated
protein, blastp match of 70% identity and 7.4e-11 P-value
to GP|7673092|gb|AAF66731.1|AF146706_1|AF146706 An2 truncated
protein {Petunia x hybrida} | chr1:21229999-21230469 REVERSE
LENGTH=471
Length=471
Score = 161 bits (87), Expect = 8e-39
Identities = 108/118 (92%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 156 CAGAAAGAGTTGTAGACTAAGATGGTTAAACTATTTAAAGCCAAGTATCAAGAGGGGAAG 215
||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||
Sbjct 13 CAGGAAGAGTTGTAGACTAAGATGCTTATACTATTTGAAGCCAAGTATCAAGAGAGGAAG 72
Query 216 ATTTA-GCTCTGATGAAGTTGATCTTCTTCTTCGCCTTCATAAGCTTCTCGGAAATAG 272
||||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 73 ATTTAGGCTCTGATGAAGTTGATCTTCTTCTTCGCCTTCCCAACCTTCTAGGAAATAG 130
Score = 137 bits (74), Expect = 1e-31
Identities = 149/185 (81%), Gaps = 6/185 (3%)
Strand=Plus/Plus
Query 281 TGATTGCTGGTCGATTGCCTGGTCGGACTGCTAATGATGTCAAAAATTACTGGAACACCC 340
|||||||||||| |||| |||||| ||| | || | |||||||||||||| |||||| |
Sbjct 228 TGATTGCTGGTCTATTGGCTGGTCAGACCACAAACGGTGTCAAAAATTACTTGAACACTC 287
Query 341 ATCTAAGTAAGAAACATGAACCATGTTGTAAGACT-a-a-aatgaaaaagaaaaa-CATC 396
| || |||||||||||||||||||||||||||| | | | || ||||| ||||| |||
Sbjct 288 AACTGAGTAAGAAACATGAACCATGTTGTAAGATTTAGATAAAAAAAAAAAAAAAGCATT 347
Query 397 ATTTCCCCTCCTACAACACCGGTCCAAAAAATCGATGTTTTTAAGCCTCGACCTCGATCC 456
| |||| | |||| | || || | ||||| | ||||||||||| | ||||||| ||||
Sbjct 348 ACTTCCAATGCTACCATACTGGGCTAAAAA-TGGATGTTTTTAATC-TCGACCTTAATCC 405
Query 457 TTCTC 461
|||||
Sbjct 406 TTCTC 410
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 38328654161
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5