BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg925876 Length=1657 Score E Sequences producing significant alignments: (Bits) Value AT5G24740.1 | Symbols: | Protein of unknown function (DUF1162)... 444 1e-123 AT5G24750.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 196 4e-49 AT5G48830.2 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 150 4e-35 > AT5G24740.1 | Symbols: | Protein of unknown function (DUF1162) | chr5:8469951-8489703 REVERSE LENGTH=10517 Length=10517 Score = 444 bits (240), Expect = 1e-123 Identities = 354/408 (87%), Gaps = 12/408 (3%) Strand=Plus/Plus Query 901 AGGTGGAAGCTACTCTGTCTGTGATCAATGTGCATTTCTCTCCGTCGATATTTGAAGGAA 960 |||| |||||||||||| || || ||||||| |||||||||||||| |||||| ||||| Sbjct 2276 AGGTTGAAGCTACTCTGCCTATGTTCAATGTCCATTTCTCTCCGTCAATATTTAAAGGAG 2335 Query 961 TCATGTCTGTGATTGAATGTCTTGATACTCAGGATCATGGAGA-TCGAAATGCTCCA-AT 1018 |||||||||||||||||| |||||||| ||||||||||||| | ||||||| ||||| | Sbjct 2336 TCATGTCTGTGATTGAATATCTTGATATTCAGGATCATGGA-ACTCGAAATCCTCCACCT 2394 Query 1019 TGACCCC-GTTCCCATCTTTCGTTTCACCGTCGATACCAACTTGGTACTTTTCAGGTTGC 1077 | |||| | ||||||||||| |||||| || | ||| |||||| | |||| ||||||| Sbjct 2395 T--CCCCTGCTCCCATCTTTCACTTCACCATCAAAACCGACTTGGCATTTTTAAGGTTGC 2452 Query 1078 ACGTCAACCTTGAAAATGAAGGAGAAAATAGCACAGTGCTTGTTCTTTCTATTCAACAGC 1137 ||||||| || |||||| |||||||||||||||||||||||||||||||||| || |||| Sbjct 2453 ACGTCAATCTCGAAAATAAAGGAGAAAATAGCACAGTGCTTGTTCTTTCTATACAGCAGC 2512 Query 1138 TGGATCTCTGGTATTCACTTACCAAAGTTGAAGAGTGGTCGGTCCGTGTGAAAACATTGG 1197 | |||||||||||||||| | | | | ||||||||||||| ||||||| ||||||||||| Sbjct 2513 TTGATCTCTGGTATTCACGTGCTATATTTGAAGAGTGGTCAGTCCGTGCGAAAACATTGG 2572 Query 1198 AAATAAAAGCTTGCTCCTCTAAAGATGCAG---ACGGTCATATTTTGTGTTCATCTGGGA 1254 |||||| ||||||||||||||||||||||| || |||||||||| ||||||||||| | Sbjct 2573 AAATAACAGCTTGCTCCTCTAAAGATGCAGCTGACAGTCATATTTTATGTTCATCTGGAA 2632 Query 1255 ATCTACTGAAATCGTACTCTGCCTATGGACAGGGGATGGATGCTCATA 1302 ||||||| ||||||| || | || ||||||| |||||||||||||||| Sbjct 2633 ATCTACTCAAATCGT-CT-TCCC-ATGGACATGGGATGGATGCTCATA 2677 Score = 278 bits (150), Expect = 2e-73 Identities = 178/191 (93%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 1325 AGGAAACATGAGTACAAAAGTCCAGATAAGAGATGTGTCTCTTCTTATATCAGATGGAAG 1384 |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 5238 AGGAAACATGAGCATAAAAGTCCAGATAAGAGATGTGTCTCTTCTTATATCAGATGGAAA 5297 Query 1385 GTGGGGATGTAGCGGTCTGCTTCTTGAAGTTCTTATGAGAAACTTTCTGCTGCAAGCTAA 1444 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct 5298 GTGGGGATGTAGCGGTATGCTTCTTGAAGTTCTTATGAGAAACTTTCTCCTGCAAGCTAA 5357 Query 1445 TCTGACCGCGAAGAAGGA-GGAGAGTTTGGTTTCATGTGATCTTGAAGTGAATTATAA-A 1502 |||| ||| || || | ||||||||||||||||||||||||||||||||||||||| | Sbjct 5358 TCTGGCCGAAAAAAAT-ATGGAGAGTTTGGTTTCATGTGATCTTGAAGTGAATTATAATA 5416 Query 1503 ATATGCACAAG 1513 ||||||||||| Sbjct 5417 ATATGCACAAG 5427 Score = 147 bits (79), Expect = 5e-34 Identities = 122/142 (86%), Gaps = 5/142 (4%) Strand=Plus/Plus Query 762 TGGATTTCAGATGTGGTTGAGAAAAGAGAGTTTGCTGGTAAGAAGGCTAAGCTTGCTGCT 821 |||| ||||||||| ||||||||||||||||||||||||||||| ||||| |||||| || Sbjct 298 TGGAGTTCAGATGTCGTTGAGAAAAGAGAGTTTGCTGGTAAGAAAGCTAAACTTGCTTCT 357 Query 822 GCAGAATTGGCAAAATTATCCAGGCGTATCTTTGATAGTCCAG-CAGGGAATCCTTTTAG 880 |||||| |||||||||| ||||||||| |||| || | ||||| | || ||| ||| | Sbjct 358 GCAGAACTGGCAAAATTGTCCAGGCGTGTCTTCGACAATCCAGGC-GGAAATTCTT--A- 413 Query 881 TATGTCATATATTGCAGCCAAG 902 ||||||||||||| | |||||| Sbjct 414 TATGTCATATATTACTGCCAAG 435 > AT5G24750.1 | Symbols: | UDP-Glycosyltransferase superfamily protein | chr5:8490572-8494587 REVERSE LENGTH=1863 Length=1863 Score = 196 bits (106), Expect = 4e-49 Identities = 126/135 (93%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 630 ATCATATGCCCATTTATGCTGGATCAGTTCTATTGGGCAGAAAAGATGTCTTGGCTTGGT 689 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1315 ATCATATGCCCATTTATGCTGGATCAGTTCTATTGGGCAGAAAAGATGTCTTGGCTTGGA 1374 Query 690 GTTGCTCCTCAACCATTGAAAAGATACCACCTGCTTCTGGAGGAAACAAATGATGAGAA- 748 |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| Sbjct 1375 GTTGCTCCTCAACCATTGAAAAGAAACCACCTGCTTCTAGAGGACTCAAATGATGAGAAG 1434 Query 749 --CATCATGGAAGCT 761 ||||| ||||||| Sbjct 1435 AACATCACGGAAGCT 1449 > AT5G48830.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. | chr5:19800169-19803098 REVERSE LENGTH=1874 Length=1874 Score = 150 bits (81), Expect = 4e-35 Identities = 93/99 (94%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1514 AGCTCTATACCAGTGGTTGCATCAGAATATGGAAGCAGTTGTGTTGATGTATGATGATCG 1573 ||||||||| |||||||||||||||||| ||||||||||||| | ||||||||| ||||| Sbjct 1351 AGCTCTATATCAGTGGTTGCATCAGAATCTGGAAGCAGTTGTATCGATGTATGAAGATCG 1410 Query 1574 CTTTGACCTCTACATTCTTCAAACTCAGGTTATCAACAA 1612 |||||||||||||||||||||||| |||||||||||||| Sbjct 1411 CTTTGACCTCTACATTCTTCAAACCCAGGTTATCAACAA 1449 Score = 89.8 bits (48), Expect = 8e-17 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 359 CAAAATAAGAAAATCAGGCAAGGAGGATCGGTTTGCAGAATTCTTATATTTCCA 412 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 1072 CAAAATAAGAAAATCAGGCAAGGAGGATCTGTTTGCAGAATTTTTATATTTCCA 1125 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 81877088895 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5