BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926090 Length=831 Score E Sequences producing significant alignments: (Bits) Value AT1G67940.1 | Symbols: ATNAP3, AtSTAR1, NAP3 | non-intrinsic AB... 1376 0.0 > AT1G67940.1 | Symbols: ATNAP3, AtSTAR1, NAP3 | non-intrinsic ABC protein 3 | chr1:25477670-25478803 FORWARD LENGTH=1063 Length=1063 Score = 1376 bits (745), Expect = 0.0 Identities = 799/825 (97%), Gaps = 3/825 (0%) Strand=Plus/Plus Query 4 TTGAAAACTTTAAAGCCATGCCGTCACTTTGGTCTAATGAATCCGATGG---ATTACGAG 60 |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct 119 TTGAAAACTTTAAAGCCATGCCATCACTTTGGTCTAACGAATCCGATGGATCATTACGAG 178 Query 61 AGCATCTTGTGGACGTTGTTGTGTCTGGTTCAGAACCAAAGATTCGGGTACATGATCTGA 120 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 AGCATCTTGTGGATGTTGTTGTGTCTGGTTCAGAACCAAAGATTCGGGTACATGATCTGA 238 Query 121 CCCGAGTCGCCGATGATGGATCTCGGATCTTGAAAGGAGTTACGGTGGATTTACCAAAAG 180 |||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| Sbjct 239 CCCGAGTCGCCGATGATGGATCTCGGATCTTGAAAGGAGTTACGATAGATATACCAAAAG 298 Query 181 GTATGATCGTTGGCGTGATTGGACCAAGTGGAAGTGGAAAGTCAACGTTTCTGAGATCTC 240 ||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 299 GTATGATCGTTGGTGTGATTGGACCTAGTGGAAGTGGAAAGTCAACGTTTTTGAGATCTC 358 Query 241 TGAATCGTCTTTGGGAACCGCCGGAGTCAACTGTGTTCTTGGACGGTGAAGATATAACGA 300 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 359 TGAATCGTCTTTGGGAACCACCGGAGTCAACTGTGTTCTTGGACGGTGAAGATATAACCA 418 Query 301 AGGTTGATGTTATTGCTCTTCGTCGTAGAGTTGGAATGCTTTTTCAGCTTCCTGTTCTTT 360 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 ACGTTGATGTTATTGCTCTTCGTCGTAGAGTTGGAATGCTTTTTCAGCTTCCTGTTCTTT 478 Query 361 TTCAAGGGACTGTTGCGGATAATGTGAGATATGGTCCAAATTTGAGAGGGGAGAAACTAA 420 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 479 TTCAAGGGACTGTTGCGGATAATGTGAGATATGGTCCGAATTTGAGAGGGGAGAAACTAA 538 Query 421 GTGACGAAGAGGTTTATAAGCTGCTAAGTCTTGCAGACCTTGATGCTTCCTTTGCTAAGA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 539 GTGACGAAGAGGTTTATAAGCTGCTAAGTCTTGCAGACCTTGATGCTTCCTTTGCTAAGA 598 Query 481 AGACTGGTGCAGAGTTATCTGTGGGTCAAGCTCAACGAGTAGCACTTGCAAGGACTCTAG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 AGACTGGTGCAGAGTTATCTGTGGGTCAAGCTCAACGAGTAGCACTTGCAAGGACTCTAG 658 Query 541 CTAACGAGCCTGAGGTGTTGCTGCTGGATGAACCAACAAGTGCTCTTGATCCGATATCGA 600 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 659 CCAACGAGCCTGAGGTGTTGCTGCTCGATGAACCAACAAGTGCTCTTGATCCGATATCGA 718 Query 601 CAGAGAACATTGAGGATGTTATAGTGAAACTGAAGAAGCAGAGAGGTATTACGACTGTGA 660 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 719 CAGAGAACATTGAGGATGTTATAGTGAAACTGAAGAAGCAGAGAGGGATTACTACTGTGA 778 Query 661 TTGTTTCTCACAGTATCAAGCAGATTCAGAAAGTTGCTGATATTGTTTGTCTTATTGTCG 720 ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| Sbjct 779 TTGTTTCTCACAGTATCAAGCAGATTCAGAAAGTTGCTGATATCGTTTGCCTTGTTGTCG 838 Query 721 ACGGAGAGATTGTTGAAGTTCTGAAACCGAGTGAGCTTTCGCACGCTACGCATCCAATGG 780 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 839 ACGGAGAGATTGTTGAAGTTCTTAAACCAAGTGAGCTTTCGCACGCTACGCATCCAATGG 898 Query 781 CACAGAGGTTTCTTCAACTCAGTTCTTGAGACCAATTTCTCATTG 825 |||||||||||||||||||||||||||||||||| |||||||||| Sbjct 899 CACAGAGGTTTCTTCAACTCAGTTCTTGAGACCATTTTCTCATTG 943 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40488722482 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5