BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926407 Length=617 Score E Sequences producing significant alignments: (Bits) Value AT1G70760.1 | Symbols: CRR23 | inorganic carbon transport prote... 911 0.0 > AT1G70760.1 | Symbols: CRR23 | inorganic carbon transport protein-related | chr1:26687230-26688384 FORWARD LENGTH=796 Length=796 Score = 911 bits (493), Expect = 0.0 Identities = 578/619 (93%), Gaps = 5/619 (1%) Strand=Plus/Plus Query 1 GAACAGACAGAAACATAGAGATGAGCCGTTGCGGCTCTCTTGGGCTCTATGCCCCGAATG 60 ||||| ||||| |||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 19 GAACA-ACAGACACATAGAGATGAGCCGGTGCGGCTCTCTTGGGCTCTATGCCCCAAATG 77 Query 61 CTTTGCCATCTCTCTCCTTGAAGCCTCGCAGTGTGAAATCTCCTCTCTGTGTTACATCTT 120 ||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||| Sbjct 78 CTTTGCCATCTCTCTCCTTGAAGCCACGCAGTGTCAAATCTCCTTTCTGTATTACATCTC 137 Query 121 ACTCCAAACCAAACGATACTCTTCTTCATAATGTTGCCAAGATGAGAGCAAAGGCCGGTG 180 || ||||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||| Sbjct 138 ACACCAAACCCAACGACACTCTTCTTCATAATGTTAACAAGATGAGAGCAAAGGCCTGTG 197 Query 181 ATTTATTTGGAGAAAAGAAGACAGTTTTGGCAGCTCAACTCGGGGCAGTTCTTGCCACGA 240 || || |||||| |||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 198 ATATACTTGGAGCAAAGAAGACAATCTTGGCAGCTCAACTCGGGGCAGTTCTTGCCACGA 257 Query 241 TTGATCATCCGGCGTTAGCAATAACAGGAGTCAACAACCAGCAGGAATTGAGCAGTGTTG 300 |||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 258 TTGACCATCCAGCCTTAGCAATAACAGGAGTTAACAACCAGCAGGAATTGAGCAGTGTTG 317 Query 301 TGCTCGATATCGGGATCATATCCGTTTGGTACTTCCTCGTAATGCCACCAATCATCATGA 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 318 TGCTCGATATCGGGATCATATCCGTTTGGTACTTCCTAGTAATGCCACCAATCATCATGA 377 Query 361 ACTGGCTGAGAGTAAGATGGTACAGAAGGAAGTTCTTCGAGATGTATTTGCAGTTCATGT 420 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 378 ACTGGCTAAGAGTAAGATGGTACAGAAGGAAGTTCTTCGAGATGTATTTACAGTTCATGT 437 Query 421 TCGTCTTCATGTTCTTCCCCGGGCTACTGTTATGGGCACCATTTCTCAACTTCAGAAAGT 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 438 TCGTCTTCATGTTCTTCCCCGGGCTACTGTTATGGGCACCATTTCTCAACTTCAGGAAGT 497 Query 481 TCCCAAGAGATCC-ATCTATGAAGAATCCTTGGGACAAACCAACAGACCCAGACTCTATT 539 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 498 TCCCAAGAGATCCTAA-TATGAAGAATCCTTGGGACAAACCAACAGACCCAGACTCTATA 556 Query 540 AAGAACAACTACCTCAAATACCCAT-TCGCAACGCCAGAAGATTACGATCTCGATTAACC 598 |||||| |||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct 557 AAGAACGTTTACCTCAAATACCCATAT-GCGACGCCAGAAGATTACGATCTCGATTAACA 615 Query 599 GATAGATTCACAAGTTTGT 617 ||||||| ||||||| ||| Sbjct 616 GATAGATCCACAAGTCTGT 634 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29738615024 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5