BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926705 Length=670 Score E Sequences producing significant alignments: (Bits) Value AT1G73330.1 | Symbols: ATDR4, DR4 | drought-repressed 4 | chr1:... 931 0.0 > AT1G73330.1 | Symbols: ATDR4, DR4 | drought-repressed 4 | chr1:27568718-27569717 REVERSE LENGTH=1000 Length=1000 Score = 931 bits (504), Expect = 0.0 Identities = 612/664 (92%), Gaps = 7/664 (1%) Strand=Plus/Plus Query 12 GAAACAACCATGAAGGCTACCGTATCCATCACTGTCATCTTTCTCGTGGTCGCTTTGGCC 71 ||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||||| Sbjct 58 GAAACAATCATGAAGGCCACCATATCCATCACTACCATCTTTCTCGTGGTCGCTTTGGCC 117 Query 72 GCACCCTCTCTAGCTCGTCCAGACAATCATGTCGAGGACTCTGTAGGCCGTTTACTTCGT 131 |||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||| Sbjct 118 GCACCCTCCCTAGCTCGTCCTGACAACCATGTCGAGGACTCTGTAGGCCGTCTACTTCGT 177 Query 132 CCTGGTCAAACCTATCACATCGTACCTGC-AACTCCTGAGAGAGGAGGAGGTCTTTTCTC 190 ||||||||||| || |||||||||||||| || ||| |||| |||||||||| ||||||| Sbjct 178 CCTGGTCAAACGTACCACATCGTACCTGCGAA-TCCCGAGACAGGAGGAGGTATTTTCTC 236 Query 191 GAACAGTGAAGAGATCTGTCCTCTCGACATCCTCCAGTCAAACGATCTC-CTTGACTTGG 249 |||||||||||| ||||||||||| |||||| ||||||||||| ||| | |||||||||| Sbjct 237 GAACAGTGAAGAAATCTGTCCTCTTGACATCTTCCAGTCAAACAATC-CGCTTGACTTGG 295 Query 250 GCGTACCCATCAAATTTAAGTCCGAGTTATGGTTTGTTAAGGAAATGAATAATGTCGCCA 309 || |||||||||||||||||||||||||||||||||||||||||||||||| | || ||| Sbjct 296 GCCTACCCATCAAATTTAAGTCCGAGTTATGGTTTGTTAAGGAAATGAATAGTATCACCA 355 Query 310 TAGAGTTCGAGGCTCCCAACTGGTTTTTGTGTCCTGAAGAATCCAAGGGGTGGAGAGTCG 369 | ||||| |||||||| |||||||||||||||||| |||||||||||||||||||||| | Sbjct 356 TCGAGTTTGAGGCTCCGAACTGGTTTTTGTGTCCTAAAGAATCCAAGGGGTGGAGAGTTG 415 Query 370 TGTACTCTGAAGAATACAAAAAGAGTCTTATAATAAGCACTGGTGTTTCATCAAACCCAA 429 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 416 TGTACTCTGAAGAATTCAAAAAGAGTCTTATAATAAGCACTGGTGGTTCATCAAACCCAA 475 Query 430 GTGGCTTCCAGATCCATCGAGTTGACGGAGGTTTTTACAAGATTGTGTATTGTACGACCA 489 |||||||||||||||||||||| ||||||||| |||||||||||| |||||||| | || Sbjct 476 GTGGCTTCCAGATCCATCGAGTCGACGGAGGTGCTTACAAGATTGTATATTGTACAAACA 535 Query 490 TATCTCCTACTACGTGCATGGACGTTGGCATATTCACCGATATCTCTGGTGCACGACGCT 549 | || |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 536 TCTCGACTACTACGTGCATGAACGTTGGCATATTCACCGATATCTCTGGTGCACGACGCT 595 Query 550 TAGCCTTGACCAACGACGAGGCTCTCCTAGTTAAGTTCCAGAAGGCAGCAACTCCAAAAC 609 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 596 TAGCCTTGACCAGCGATGAGGCTCTCCTAGTTAAGTTCCAGAAGGCAGCAACTCCAAAAG 655 Query 610 CTGATTTGAAGACTAAGCTGAGGATGTTCCCTTTCTACTAACTAACAACT-T-GTACCAA 667 ||||||||||||||||||||||||||||||||||||||| | | |||||| | ||||||| Sbjct 656 CTGATTTGAAGACTAAGCTGAGGATGTTCCCTTTCTACTGATTCACAACTCTTGTACCAA 715 Query 668 -AAA 670 ||| Sbjct 716 GAAA 719 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32401024815 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5