BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg926720
Length=1439
Score E
Sequences producing significant alignments: (Bits) Value
AT1G73480.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 2187 0.0
AT1G18360.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 719 0.0
> AT1G73480.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:27628939-27632806 FORWARD LENGTH=2039
Length=2039
Score = 2187 bits (1184), Expect = 0.0
Identities = 1365/1449 (94%), Gaps = 25/1449 (2%)
Strand=Plus/Plus
Query 1 TCTGATTCATTTCT-TTGGTTTATGATCTGTTCAAGTAAAGGAACAACCTTAATCGCTAG 59
|||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 306 TCTGATTCATTTTTCTTGGTTTATGATCTGTTCAAGTAAAGGAACAATCTTAATCGCTAG 365
Query 60 CGGAAAAAATTCAAATTCAATCCCAAGATTACCCCTAACAGGGTCATCCGCAAA-T---C 115
|| |||||||||||| ||||||| ||||||||||||| |||||||||| |||| | |
Sbjct 366 AGGTAAAAATTCAAATACAATCCCTAGATTACCCCTAAAAGGGTCATCCACAAATTACGC 425
Query 116 G----G-ATTCAAATTCGAAACCCAATTAGTGTCGAAAAAACATTCCGACGATCATCGTC 170
| | |||||||||||||||||||| |||||| ||||| ||||| |||||| ||
Sbjct 426 GAATCGAATTCAAATTCGAAACCCAATCAGTGTC---AAAACTTTCCGGCGATCA---TC 479
Query 171 ATCGTCATCATCAATGGCGGTGGAAACAATGTTGATGGGATCAGATTCATCAACTTTGAT 230
| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 480 -T--TCATCGTCAATGGCGGTGGAAACAATGTCGATGGGATCAGATTCATCAACTTTGAT 536
Query 231 TCTAACATCTGGAGCAAGCGGTCGCGTTAGAGTACTCTTCTCGATGCGAGAGCTCAAGCG 290
||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 537 TCTAACATCAGGAGCAAGCGGTCGCGTTAGGGTACTCTTCTCGATGCGAGAGCTTAAGCG 596
Query 291 TCTCGTGACGATTATCCAATCGTTGATTCTTTTCCTCCTCCTTCCGTTTCGCGTCGTCGT 350
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 TCTCGTTACGATTATCCAATCGTTGATTCTTTTCCTCCTCCTTCCGTTTCGCGTCGTCGT 656
Query 351 TTGGCGGAGGAGGACTGGTGCGGTGGTCATCAGAGACGATAAACAGGAGAGGAAGGTTTG 410
||||||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct 657 TTGGCGGCGGAGGACTGGTGCGGTGGTTATCAGAGACGATAAGCAAGAGAGGAAGGTTTG 716
Query 411 GTCTCCGCCGCAGATCGTGGTGAGGAAGAGGAACATCGGTGGCGAAAGCGGATGCAGCGT 470
|||||| ||||||||||||||||||||||||||||||||||||| || | |||||||
Sbjct 717 GTCTCCTCCGCAGATCGTGGTGAGGAAGAGGAACATCGGTGGCG-AA----A-GCAGCGT 770
Query 471 TTCGCCTCCGTCGGTTCCGGCGGCGGTGGTGGATGAGGAGGTTGCTGTTCGACGTGAGCT 530
||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||| ||
Sbjct 771 TTCTCCTCCGTCGGTTCCAGCTGCGGTGGTGGATGGGGAGGTTGCTGTTCGACGTGAACT 830
Query 531 GGCGATTAAGCGAGTATTGGAGGATGAAGGCGGCGATGGAAGCTCCGTCAGAGATTATTC 590
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 831 GGCGATTAAGCGAGTTTTGGAGGATGAAGGCGGCGATGGAAGCTCCGTCAGAGATTATTC 890
Query 591 GCTTTTCACGACGAAGAGAGGTGATACGTTGTTTACACAGTCATGGTCACCTCTTTCCCC 650
||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 891 GCTATTCACGACGAAGAGAGGAGATACGTTGTTTAGTCAGTCATGGTCACCTCTTTCCCC 950
Query 651 AAATCACAGGGGGCTTATTGTTCTGCTACATGGATTAAACGAGCATAGTGGCAGGTATAG 710
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 AAATCACAGGGGACTTATTGTTCTGCTACATGGATTAAACGAGCATAGTGGCAGGTATAG 1010
Query 711 TGATTTTGCAAAGCAGCTTAATGCTAATGGGTTCAAGGTCTATGGAATTGACTGGATCGG 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 TGATTTTGCAAAGCAGCTTAATGCTAATGGGTTCAAGGTCTATGGAATTGACTGGATCGG 1070
Query 771 TCATGGCGGAAGTGATGGACTTCATGCTTACGTTCCTTCCCTTGATTACGCTGTCGCAGA 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1071 TCATGGCGGAAGTGATGGACTTCATGCTTACGTTCCTTCCCTTGATTACGCTGTCACAGA 1130
Query 831 TTTGAAATCATTTCTTGAAAAGGTATTCACAGAGAATCCAGGACTCCCCTGTTTCTGCTT 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 TTTGAAATCATTTCTTGAAAAGGTATTCACAGAGAATCCAGGACTCCCCTGTTTCTGCTT 1190
Query 891 TGGACACTCAACAGGTGGAGCAATCATTCTCAAGGCTATGCTGGATCCAAAGATTGAATC 950
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1191 TGGACACTCAACAGGTGGAGCAATCATCCTCAAGGCTATGCTGGATCCAAAGATTGAATC 1250
Query 951 TCGAGTTTCAGGCATTGTATTGACTTCACCAGCTGTTGGAGTTCAACCATCCCATCCAAT 1010
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 1251 TCGAGTTTCAGGCATTGCATTGACTTCACCAGCTGTTGGAGTCCAACCATCCCATCCAAT 1310
Query 1011 CTTCGCAGTTCTTGCTCCAATCATGGCGTTCCTCCTGCCCAGGTACCAAATCAGTGCAGC 1070
|||||| ||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct 1311 CTTCGCTGTTCTTGCTCCAATCATGGCGTTTCTACTACCCAGGTACCAAATCAGTGCAGC 1370
Query 1071 AAACAAGAAAGGAATGCCGGTTTCTCGTGATCCAGCAGCTCTTATCGCCAAATACTCTGA 1130
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1371 AAACAAGAAAGGAATGCCGGTTTCTCGTGACCCAGCAGCTCTCATCGCCAAATACTCTGA 1430
Query 1131 CCCGTTAGTCTTCACCGGATCCATCCGGGTTAAAACCGGATACGAGATCCTTAGAATCAC 1190
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1431 CCCATTAGTCTTCACCGGATCCATCCGGGTTAAAACCGGCTACGAGATCCTTAGAATCAC 1490
Query 1191 TGCTCACTTGCAACAGAACCTGAACAAAGTGAAAGTTCCTTTTCTTGTGATGCACGGTAG 1250
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1491 TGCTCACTTGCAACAGAACCTGAACAAAGTGAAAGTTCCCTTTCTTGTGATGCACGGTAC 1550
Query 1251 AGACGACACAGTGACCGATCCTAACGCTTCAAAGAAGCTCTATGAGGAAGCTTCCTCGTC 1310
||||||||||| |||||||||| ||| |||||||||||||| ||||||||| |||||||
Sbjct 1551 TGACGACACAGTTACCGATCCTAGCGCCTCAAAGAAGCTCTACGAGGAAGCTGCCTCGTC 1610
Query 1311 GGACAAATCAATCAAGCTCTACGATGGGTTATTGCACGATCTTCTCTTCGAACCCGAACG 1370
||||||||| ||||||||||||| ||||| |||||||||||||| || |||||||||||
Sbjct 1611 AGACAAATCACTCAAGCTCTACGACGGGTTGTTGCACGATCTTCTTTTTGAACCCGAACG 1670
Query 1371 AGAAATCATCGCTGGAGCCATATTAGATTGGCTAAACCAGCGGGTTTAGCTCGTTCAAAC 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1671 AGAAATCATCGCTGGAGCCATATTAGATTGGCTAAACCAGCGGGTTTAGCTCGTTCAAAC 1730
Query 1431 CAACAATCA 1439
|||||||||
Sbjct 1731 CAACAATCA 1739
> AT1G18360.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:6316695-6319427 REVERSE LENGTH=1673
Length=1673
Score = 719 bits (389), Expect = 0.0
Identities = 765/944 (81%), Gaps = 35/944 (4%)
Strand=Plus/Plus
Query 494 CGGTGGTGGATGAGGAGGTTGCTGTTCGACGTG-AGCTGGCGATTAAG-CGAGTATTGGA 551
||||||| |||||||| || || || | || | | |||| | | || || || |||||
Sbjct 444 CGGTGGTAGATGAGGAAGTAGCCATTAGGCG-GAAATTGGC-AATGAGACGGGTTTTGGA 501
Query 552 GGATGAA-GGCGGCGATGGAAGCTCCGTCAGAGATTAT-TCGCTTTTCACGACGAAGAGA 609
|||| || || ||||||||||||||||||||||||| | ||||| |||||||| ||||||
Sbjct 502 GGAT-AACGGTGGCGATGGAAGCTCCGTCAGAGATT-TCTCGCTATTCACGACCAAGAGA 559
Query 610 GGTGATACGTTGTTTACACAGTCATGGTCACCTCTT---TCCCCAAATCACAGGGGGCTT 666
||||| |||||||| || ||||||||| | ||| || ||| | || ||||||| |||
Sbjct 560 GGTGACACGTTGTTCACTCAGTCATGGACTCCTGTTGACTCCGCTAAGAACAGGGGACTT 619
Query 667 ATTGTTCTGCTACATGGAT-TAAACGAGCATAGTGGCAGGTATAGTGATTTTGCAAAGCA 725
|||||||||| ||||| | | ||||| || |||||||||||||||||||||||||||||
Sbjct 620 GTTGTTCTGCTTCATGG-TCTGAACGAACACAGTGGCAGGTATAGTGATTTTGCAAAGCA 678
Query 726 GCTTAATGCTAA-TGGGTTCAAGGTCTATGGAATTGACTGGATCGGTCATGGCGGAAGTG 784
||| |||| ||| ||| ||||||||||||||||| || |||||||||||||| ||||| |
Sbjct 679 GCTAAATG-TAAATGGATTCAAGGTCTATGGAATAGATTGGATCGGTCATGGTGGAAGCG 737
Query 785 ATGGACTTCATGCTTACGTTCCTTCCCTTGATTACGCTGTCGCAGATTTGAAATCATTTC 844
||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| |||
Sbjct 738 ATGGACTTCATGCTTACGTTCCTTCTCTTGATTATGCTGTCGCTGATTTGAAATCGTTTA 797
Query 845 TTGAAAAGGTA-TTCACAGAGAATCCAGGACTCCCCTGTTTCTGCTTTGGACACTCAACA 903
|||| |||||| || | || || || ||| | |||||||||||| |||| |||||||||
Sbjct 798 TTGAGAAGGTAATTG-CGGAAAACCCGGGATTGCCCTGTTTCTGCATTGGCCACTCAACA 856
Query 904 GGTGGAGCAATCATTCTCAA-GGCTATGCTGGATCCAAAGATTGAATCTCGAGTTTCAGG 962
|| ||||| ||||| || || ||||||||| ||| ||||||||||| |||||||||||||
Sbjct 857 GGAGGAGCCATCAT-CTTAAAGGCTATGCTAGATGCAAAGATTGAAGCTCGAGTTTCAGG 915
Query 963 CATTGTATTGACTTCACCAGCTGTTGGAGTTCAACCATCCCATCCAATCTTCG-CAGTTC 1021
||||| | |||||||| || |||||||| |||||| | |||| ||||||| | ||
Sbjct 916 GATTGTGCTAACTTCACCCGCAGTTGGAGTCCAACCAACTTATCCTATCTTCGGC-GTAA 974
Query 1022 TTGCTCCAATCATGGCGTTCCTCCTGCCCAGGTACCAAATCAGTGCAGC-AAACAAGAAA 1080
|||| ||| || | |||||||| | || || || || | ||||| || ||| ||||||
Sbjct 975 TTGCACCATTCCTCTCGTTCCTCATACCGAGATATCAGTTAAGTGCTGCGAAA-AAGAAA 1033
Query 1081 GGAATGCCGGTTTCTCGTGATCCAGCAGCTCTTATCGCC-AAATACTCTGACCCGTTAGT 1139
|||||||||||||||||| || | |||||| || | | ||||||||||||||| ||||
Sbjct 1034 ATAATGCCGGTTTCTCGTGACCCGGAAGCTCT-ATTGGCTAAATACTCTGACCCGCTAGT 1092
Query 1140 CTTCACCGGATCCATCCGGGTTAA-AACCGGATA-CGAGATCCTTAGAATCACTGCTCAC 1197
|| ||| |||| ||||| | || |||||| || ||||||||||||| | ||||||
Sbjct 1093 CTACACTGGATTTATCCGAGC-AAGAACCGG-TAACGAGATCCTTAGACTTGGTGCTCAT 1150
Query 1198 TTGCAACAGAACCTGAACA-AAGTGAAAGTTCCTTTTCTTGTGATGCACGGTAGAGAC-G 1255
|| | ||||| ||||||| || | || ||||| ||||||||||||||||| | || | |
Sbjct 1151 TTACTGCAGAATCTGAACAGAA-TCAAGGTTCCGTTTCTTGTGATGCACGGCACAG-CTG 1208
Query 1256 ACACAGTGACCGATCCTAACGCTTCAAAGAAGCTCTATGAGGAAGCTTCCTCGTCGGACA 1315
| ||||| || |||||||| | | | ||||||| || | || |||||||| || || |
Sbjct 1209 ATACAGTTACTGATCCTAAAGGTACTCAGAAGCTATACAATGAGGCTTCCTCATCCGATA 1268
Query 1316 AATCAATCAAGCTCTACGATGGGTTATTGCACGATCTTCTCTTCGAACCCGAACGAGAAA 1375
| || |||||||| ||||| ||||| || |||||||| ||||| ||||| ||||| ||||
Sbjct 1269 AGTCGATCAAGCTGTACGACGGGTTGTTACACGATCTGCTCTTTGAACCAGAACGGGAAA 1328
Query 1376 -TCATCGCTGGAGCCATATTAGATTGGCTAAACCAGCGGGTTTA 1418
| || ||||||| |||||| ||||||||||||| |||||||||
Sbjct 1329 CT-ATAGCTGGAGTCATATTGGATTGGCTAAACCGGCGGGTTTA 1371
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70933370085
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5