BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926748 Length=1735 Score E Sequences producing significant alignments: (Bits) Value AT1G73730.1 | Symbols: EIL3, SLIM1, ATSLIM, AtEIL3 | ETHYLENE-I... 2641 0.0 AT3G20770.1 | Symbols: EIN3, AtEIN3 | Ethylene insensitive 3 fa... 195 2e-48 > AT1G73730.1 | Symbols: EIL3, SLIM1, ATSLIM, AtEIL3 | ETHYLENE-INSENSITIVE3-like 3 | chr1:27730031-27732514 REVERSE LENGTH=2167 Length=2167 Score = 2641 bits (1430), Expect = 0.0 Identities = 1645/1748 (94%), Gaps = 17/1748 (1%) Strand=Plus/Plus Query 1 TTTTGATTGATTTTGATTAAATGGGCGATCTTGCTGGGTCCGTGGCAGACATCAGGATGG 60 ||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| Sbjct 132 TTTTGATTGATTTTGTTTAAATGGGCGATCTTGCTATGTCCGTAGCAGACATCAGGATGG 191 Query 61 AGAATGAGCCTGATGACTTGGCTAGTGATAATGTTGCTGAGATTGATGTGAGTGATGAAG 120 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 192 AGAATGAGCCTGATGATTTAGCTAGTGATAATGTTGCTGAGATTGATGTGAGTGATGAAG 251 Query 121 AGATTGATGCTGAAGACCTTGAGAGACGGATGTGGAAAGATCGTGTCAGGCTTAAAAGAA 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 AGATTGATGCTGACGACCTTGAGAGACGGATGTGGAAAGATCGTGTCAGGCTTAAAAGAA 311 Query 181 TCAAAGAGCGACAGAAAGTTGGCTCTCAGGGAGCTCAAACGAAGGAGACACCGAAGAAAA 240 ||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||| Sbjct 312 TCAAAGAGCGACAAAAAGCTGGCTCTCAAGGAGCTCAAACGAAGGAGACACCTAAGAAAA 371 Query 241 TCTCGGATCAAGCTCAGAGGAAGAAAATGTCTAGAGCTCAAGATGGTATACTTAAGTACA 300 |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 372 TCTCTGATCAAGCTCAGAGGAAGAAAATGTCTAGAGCTCAAGATGGTATCCTTAAGTACA 431 Query 301 TGTTGAAGCTTATGGAAGTCTGCAAAGTTCGCGGGTTTGTTTATGGTATAATACCGGAAA 360 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 432 TGTTGAAGCTTATGGAAGTCTGCAAAGTTCGCGGGTTTGTCTATGGTATAATACCGGAAA 491 Query 361 AGGGAAAGCCCGTGAGCGGTTCCTCTGACAATATAAGAGCTTGGTGGAAAGAGAAAGTGA 420 |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 492 AGGGCAAGCCTGTGAGTGGTTCCTCTGACAATATAAGAGCTTGGTGGAAAGAGAAAGTGA 551 Query 421 AGTTTGATAAGAACGGGCCAGCCGCAATTGCTAAATACGAAGAGGAGTGTTTAGCTTTTG 480 |||||||||||||||| || || || ||||||||||||||||||||||||||||| |||| Sbjct 552 AGTTTGATAAGAACGGTCCTGCTGCTATTGCTAAATACGAAGAGGAGTGTTTAGCGTTTG 611 Query 481 GTAAATCCGATGGGAATAGGAATTCGCAGTTTGTTCTCCAGGACCTGCAAGATGCAACTT 540 | ||||| ||||||||||||||||| ||||||||||||||||| |||||||||| |||| Sbjct 612 GGAAATCTGATGGGAATAGGAATTCACAGTTTGTTCTCCAGGATTTGCAAGATGCTACTT 671 Query 541 TAGGGTCTCTGTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAAAGGAAGTATCCGC 600 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 672 TAGGGTCTTTGTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAAAGGAAGTATCCGT 731 Query 601 TGGAAAAAGGGACTCCTCCGCCTTGGTGGCCAACCGGGAATGAAGAATGGTGGGTGAAAC 660 |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 732 TGGAGAAAGGGACGCCTCCGCCTTGGTGGCCAACGGGGAATGAAGAATGGTGGGTGAAAC 791 Query 661 TCGGTCTGCCCAAAAGCCAGAGTCCTCCTTACAGAAAACCGCACGATCTCAAGAAGATGT 720 |||||||||| ||||||||||||||||||||| ||||||| || |||||||||||||||| Sbjct 792 TCGGTCTGCCTAAAAGCCAGAGTCCTCCTTACCGAAAACCTCATGATCTCAAGAAGATGT 851 Query 721 GGAAGGTTGGAGTTTTAACGGCAGTGATCAATCATATGTTGCCTGATATTGCAAAGATTA 780 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 852 GGAAGGTTGGAGTTTTAACGGCAGTGATCAATCATATGTTACCTGATATTGCAAAGATTA 911 Query 781 AGAGGCATGTTCGCCAGTCGAAATGTTTACAGGACAAGATGACAGCTAAAGAGAGTGCGA 840 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 912 AGAGGCATGTTCGTCAGTCGAAATGTTTACAGGACAAGATGACAGCTAAAGAGAGTGCGA 971 Query 841 TTTGGTTGGCGGTTTTGAACCAAGAGGAATCCCTGATTCAGCAGCCTAGCAGTGACAATG 900 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 972 TTTGGTTGGCGGTTTTGAACCAAGAGGAATCTTTGATTCAGCAGCCTAGCAGTGACAATG 1031 Query 901 GAAACTCCAATGTAACCGAGGCACATCGGAGGGGTAATAACGCTGACAGGAGGAAACCTG 960 ||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 1032 GAAACTCCAATGTGACTGAGACACATCGTAGGGGTAATAACGCTGACAGGAGGAAACCTG 1091 Query 961 TGATCAACAGTGACAGTGACTATGATGTTGATGGGACAGAGGATGCTTCAGGTTCAGTTT 1020 || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1092 TGGTCAACAGTGACAGTGACTATGATGTTGATGGGACAGAGGAAGCTTCAGGTTCAGTTT 1151 Query 1021 CATCTAAAGACAGTAGAAGAAATCAGACTCAAAAAGAACAACCAACAGCCATTTCACATA 1080 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 1152 CATCTAAAGACAGTAGAAGAAATCAGATTCAAAAAGAACAACCAACAGCCATCTCACAT- 1210 Query 1081 T-AGTAAGAGATCAAGATAAAACAGAGAAACATCGCAGAAGGAAAAGACCCCGAATCAGA 1139 | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| Sbjct 1211 TCAGTAAGAGATCAAGATAAAGCAGAGAAACATCGCAGAAGGAAAAGACCTCGAATTAGA 1270 Query 1140 TCCGGAACAAACAATCGACAAGAGGAAGAACAACCTGAAGCTGAACAAAGAAACATCTTA 1199 |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1271 TCCGGAACTGTCAATCGACAAGAGGAAGAACAACCTGAAGCTCAACAAAGAAACATCTTA 1330 Query 1200 CCTGATATGAATCATGTGGATGACCCTCTGCTAGAATATAACATCAACGGTACTCATCAC 1259 ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 1331 CCTGATATGAATCATGTTGATGCCCCTCTGCTAGAATATAACATCAACGGTACTCATCAA 1390 Query 1260 GAGGAAGATGTTGTAGACCCAAACATTGCCTTAGGACCAGAGGAGAATGGTCTGGAATTA 1319 ||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||| || Sbjct 1391 GAGGACGATGTTGTCGACCCAAATATTGCCTTAGGACCAGAGGATAATGGTCTGGAACTA 1450 Query 1320 GTGGTTCCTGAGTTCCATAACAACTATACTTATCTTCCACCTGTTAATAGA-CAAGA-TA 1377 ||||||||||||||| |||||||||||||||||||||||| ||||||| || ||| | || Sbjct 1451 GTGGTTCCTGAGTTCAATAACAACTATACTTATCTTCCACTTGTTAAT-GAACAA-ACTA 1508 Query 1378 TGATGCCTGTAGACGAAAGGCCAATGCTTTATGGACCAAATCCTAACCATGAGCTGCAAT 1437 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| Sbjct 1509 TGATGCCTGTAGACGAAAGGCCAATGCTTTATGGACCAAACCCTAACCAAGAGCTTCAAT 1568 Query 1438 TTGGGTCAGGTTACAACTTCTACAATCCCTCTGCAGTGTTTGTGCATAATCAGGAAGACG 1497 |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 1569 TTGGGTCAGGGTACAACTTCTACAATCCCTCTGCAGTGTTTGTACATAACCAGGAAGACG 1628 Query 1498 ACATTCTCCATACACAGATAGAAATGAATGCACAAGCACCACCTCACAACAGCGGGTTCG 1557 ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 1629 ACATTCTCCATACACAGATAGAAATGAATACACAAGCACCACCTCACAACAGTGGGTTCG 1688 Query 1558 AGG---CCCCAGGAGGAGTACTTCAACCCCTTGGTTTACTCGGAAATGAAGACGGCGTAG 1614 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1689 AGGAGGCCCCAGGAGGAGTACTTCAACCCCTTGGTTTACTCGGAAATGAAGACGGTGTAA 1748 Query 1615 CAGGGAGTGAGTTGTCTCAGTATCCGAGTGACATTATGTCTCCATTTAATGACCTGT-CG 1673 |||||||||||||| ||||||||| ||||| |||| |||||||||| | |||| || | Sbjct 1749 CAGGGAGTGAGTTGCCTCAGTATCAGAGTGGCATTCTGTCTCCATTGACTGACTTGGAC- 1807 Query 1674 TTTGATTATGGTA-TT--G---ATGATTTCTCATGGTTTGGAGCTTAGTGTCTTGCCAtt 1727 ||||| |||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct 1808 TTTGACTATGGTGGTTTTGGTGATGATTTCTCATGGTTTGGAGCTTAGTGTCTTGCCATT 1867 Query 1728 ttttttGG 1735 |||||||| Sbjct 1868 TTTTTTGG 1875 > AT3G20770.1 | Symbols: EIN3, AtEIN3 | Ethylene insensitive 3 family protein | chr3:7260432-7263352 REVERSE LENGTH=2413 Length=2413 Score = 195 bits (105), Expect = 2e-48 Identities = 481/656 (73%), Gaps = 52/656 (8%) Strand=Plus/Plus Query 249 CAAGCTCA-GAGGAAGAAAATGTCTAGAGCTCAAGATGGTATACTT-AAGTACATGTTGA 306 |||||| | |||||||||||||||||||||||||||||| || ||| ||||| ||||||| Sbjct 512 CAAGCT-AGGAGGAAGAAAATGTCTAGAGCTCAAGATGGGAT-CTTGAAGTATATGTTGA 569 Query 307 AGCTTATGGAAGTCTGCAAAGTTCGCGGGTTTGTTTATGGTATAATACCGGAAAA-GGGA 365 || | |||||||| || |||| || || ||||||||||| || || ||||| || |||| Sbjct 570 AGATGATGGAAGTTTGTAAAGCTCAAGGCTTTGTTTATGGGATTATTCCGGAGAATGGGA 629 Query 366 AAGCCCGTGAGC-GGTTCCTCTGACAATATAAGAGCTTGGTGGAAAGAGAAAGTGAAGTT 424 | ||| |||| | ||| | ||||| ||| |||| | ||||||||||| || || | ||| Sbjct 630 A-GCCTGTGA-CTGGTGCTTCTGATAATTTAAGGGAGTGGTGGAAAGATAAGGTTAGGTT 687 Query 425 TGATAAG-AACGGGCCAGCCGCAATTGCTAAATA-CGAAGAGGAGTGTT-TAGCTTTTGG 481 |||| | || || || || || ||| | || || | ||| |||| | || | || Sbjct 688 TGATC-GTAATGGTCCTGCGGCTATTACCAAGTATC-AAGCGGAGAATAATATCCCGGGG 745 Query 482 -TAAATCCGATGGGAATAG---GAATTCG-CAGTTTGTTC-T-CCA-G---GACCTGCAA 530 | || || || |||| || || | | | | || | || | || || ||| Sbjct 746 ATTCAT--GAAGGTAATAACCCGA-TTGGACCGACTCCTCATACCTTGCAAGAGCTTCAA 802 Query 531 GATGCAACT-TTAGGGTCTCTGTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAAAG 589 || | ||| || || || || || ||| | ||||||||||| |||||||||||||| || Sbjct 803 GACACGACTCTT-GGATCGCTTTTGTCTGCGTTGATGCAACACTGTGATCCTCCTCAGAG 861 Query 590 GAAGTAT-CCGCTGGAAAAAGGGACT-CCTCCGCCTTGGTGGCC-AACCGGGAATGAAGA 646 | || | || |||| ||||| | | ||||| || |||||||| || ||||| || || Sbjct 862 -ACGTTTTCCTTTGGAGAAAGG-AGTTCCTCCTCCGTGGTGGCCTAAT-GGGAAAGAGGA 918 Query 647 ATGGTGGG-TGAAACTCGGTCTGCCCAAA-AGCCAGAGTCCT-C-C-TTACA-GAAAACC 700 |||||| | || || ||| |||| ||| | | || ||||| | | ||||| ||| || Sbjct 919 TTGGTGGCCTCAA-CTTGGTTTGCCTAAAGATCAAG-GTCCTGCACCTTACAAGAAG-CC 975 Query 701 GCACGATCTCAAGAAGATGTGGAAGGTTGGAGTTTTAACGGCAGTGATCAATCATATGTT 760 || ||| | |||||| |||||| || || ||||| || || || ||||| |||||||| Sbjct 976 TCATGATTTGAAGAAGGCGTGGAAAGTCGGCGTTTTGACTGCGGTTATCAAGCATATGTT 1035 Query 761 GCCTGATATTGCAAAGATTAAG-AGGCAT-GTTCGCCAGTCGAAATGTTTACAGGACAAG 818 ||||||||||| ||||| | | || | || | || || |||||||| ||||| ||| Sbjct 1036 TCCTGATATTGCTAAGATCC-GTAAGC-TCGTGAGGCAATCTAAATGTTTGCAGGATAAG 1093 Query 819 ATGACAGCTAAAGAGAGTGCGATTTGG-TTGGCGGTT-TTGAACCAAGAGGAATCC 872 ||||| |||||||||||||| | ||| ||| | || || |||||||| || ||| Sbjct 1094 ATGACTGCTAAAGAGAGTGCTACCTGGCTTG-CTATTATT-AACCAAGAAGAGTCC 1147 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85792731405 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5