BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926763 Length=1724 Score E Sequences producing significant alignments: (Bits) Value AT1G73850.1 | Symbols: | Protein of unknown function (DUF1666)... 2575 0.0 > AT1G73850.1 | Symbols: | Protein of unknown function (DUF1666) | chr1:27767263-27770457 FORWARD LENGTH=2091 Length=2091 Score = 2575 bits (1394), Expect = 0.0 Identities = 1624/1734 (94%), Gaps = 20/1734 (1%) Strand=Plus/Plus Query 1 GAAGAAGAAGGGGAAGAATTCAAGATGTCGTGTAACACAAGTTACCATGTGATATCTAGA 60 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 317 GAAGAAGAAGGGGAAGAACTCAAGATGTCGTGTAACTCAAGTTACCATGTGATATCTAGA 376 Query 61 GATCAAAATCCAGATTTGATAGCTGATATAGGGGACGACGGAGAATCTTTAGTGTTTTAC 120 |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 377 GATCCAAATCCGGATTTGATAGCTGATATAGCAGACGACGGAGAATCTTTAGTGTTTTAC 436 Query 121 AATAATAACTCTCAAGGTGGACTATGTAATCAACACACGAAGGAGGAGTTCAATAATGTC 180 ||||||| |||||||| ||| || ||||||||||||| | ||||||||||||||||| Sbjct 437 AATAATATTTCTCAAGGAGGAGTAAATAATCAACACACG-A--AGGAGTTCAATAATGTC 493 Query 181 TATCAAACTCATGAACAC---G-A-A-GAAGAAGATGATCAAGATTCCAACACTTCTTCT 234 |||||||||||||||||| | | | |||||||||||||||||||| |||||||||||| Sbjct 494 TATCAAACTCATGAACACGAAGAAGAGGAAGAAGATGATCAAGATTCTAACACTTCTTCT 553 Query 235 ACGGAGGAACACTTTTCTTCTGCCAATGTTTCTCCTTATCACAGCGAATCATCAGTAGAA 294 || ||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||||| Sbjct 554 ACAGAGGAGCACTTTTCTTCTGCCAATGTTTCTCCTTATCGCAGTGAATCATCAATAGAA 613 Query 295 GAGGAAGATGATGGCGTTGAAGATCTTCCTGACGATCGTTATGATGATGATGACGAAGAT 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 614 GAGGAAGATGATGGCGTTGAAGATCTTCCTGACGATCGTTATGATGATGATGACGAAGAT 673 Query 355 GAAGAGGTAGGAGGAGTGTCACGATACGATGTCGTTGAGGATTTGGTTCGTAAGCAACCA 414 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 674 GAAGAGGTAGGAGGAGTGTCACGATACGACGTCGTTGAGGATTTGGTTCGTAAGCAACC- 732 Query 415 AATACTACTACTAGTACTCGTGGTCCCTCTCGTTTCCAAAGTGGTTTGGTGTTCAATGAC 474 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 733 AA-A-TACTACTAGTACTCGTGGTCCCTCTCGTTTCCAAAGTGGTTTGGTGTTCAATGAC 790 Query 475 AAAAGCTACAATGCAGGAGAGTTTGTGTCTAATGGAGGAATCAAGAATGATGTTGACGAG 534 ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 791 AAAAGTTACAATGCAAGAGAGTTTGTGTCCAATGGAGGAATCAAGAATGATGTCGACGAG 850 Query 535 ATACAGCCATCATCGGGGTTTTCCATgagagagatcaaagcagaggaattagaggaagag 594 ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||| Sbjct 851 ATACAGCCATCATCGGGCTTTGACATGAGAGAGATAAAAGCAGAGGAATTAGAGGAAGAA 910 Query 595 gaagaagaagagagaggagagaTATTCGGACAGTCATACACGAATGGGTCAACGTCAAAA 654 |||||||||||||||||| | ||||||||| |||||| |||||||||||||||||| ||| Sbjct 911 GAAGAAGAAGAGAGAGGACAAATATTCGGAGAGTCATGCACGAATGGGTCAACGTCGAAA 970 Query 655 AGCTCATCAGAATGGAGAAACTCTGTCAAAACCGACGACCCTTTCTCAACTTCCTCCCGC 714 |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct 971 AGCTCATCGGAATGGAGAAACTCTGTCAAAACTGACGACCCTTTCTCAACGTCCTCTCGC 1030 Query 715 CGGAGTTGCCCTAAATGGGAATCTTACACCGTCTTCCAAAAGTACGACGAAGAAATGACT 774 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1031 CGGAGTTGCCCTAAATGGGAATCTTACACCGTCTTCCAAAAGTACGACGAAGAAATGACT 1090 Query 775 TTTCTCACTAGAATCACTGCTCAAAAGCTTCACGAAACTGAATCGTTAAAGTCAATCATG 834 ||||||||||||||| |||||||||||||||||||| | ||||| || |||||||| ||| Sbjct 1091 TTTCTCACTAGAATCTCTGCTCAAAAGCTTCACGAAGCAGAATCTTTGAAGTCAATTATG 1150 Query 835 GTGGAGCCAAGATCGATCTCGGAGAGGATCGTTCACAAGTTATCATCAAATGGATCACAC 894 |||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||| Sbjct 1151 GTGGAGCCAAGATCTATCTCGGAGAGGATCGTTCACAAGTTATCATCAAACGG-T--CAC 1207 Query 895 AAGAAAAAACAACAACGTTATCCTGGTGGCAATGGGTCGAGACCAAACCCGTACGTGGAA 954 |||||||||||| ||| ||||| || |||||||||||||||||||||| ||||||||| Sbjct 1208 AAGAAAAAACAAAAACAATATCCAGGCAGCAATGGGTCGAGACCAAACCCTTACGTGGAA 1267 Query 955 CTAGAATCAGCTTACGTGGCACAGATATGTCTAACATGGGAAGCTCTAAGTTGGAACTAC 1014 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1268 CTAGAATCCGCTTACGTGGCACAGATATGTCTAACATGGGAAGCTCTAAGTTGGAACTAC 1327 Query 1015 AAAAACTTCGAGAGAAAAAGATCATCCAGGCTACGAAGCTTCAACGACGTCGGATGTCCG 1074 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||| Sbjct 1328 AAAAACTTCGAGAGAAAAAGATCAACCACGCAACGAAGCTTCAACGACGTAGGATGTCCC 1387 Query 1075 GCCGGCATCGCCGACCAGTTCCGTACGTTTCACATTCTTTTACAAAGATACGTGGAGAAT 1134 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct 1388 GCCGGAATCGCCGACCAATTCCGTACGTTTCACATTCTTTTACAAAGATACGTAGAAAAT 1447 Query 1135 GAGCCTTATGAACATGGAAGAAGACCAGAGATTTATGCCCGAATGAGAACTCTTGCGCCC 1194 || ||||||||||||||||||||||||||||||||||| || ||| |||||||||| || Sbjct 1448 GAACCTTATGAACATGGAAGAAGACCAGAGATTTATGCTCGCATGCGAACTCTTGCTCCT 1507 Query 1195 AAATTGCTTCTTGTTCCTGAATACCAAGATTATGA-G--GAGGATGAGAAAGAAGAAGAG 1251 ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||| ||| Sbjct 1508 AAATTGCTTCTTGTTCCTGAATACCAAGATTATGAGGAAGAGGAGGAGAAGGAAGACGAG 1567 Query 1252 AAAGAGGAGGGTTTCAGGTCGAGGATATCGTCAGCGTCGTTCTTGATGATAATGGAGGAA 1311 || || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1568 AACGAAGAGGGTTTCAGGTCGAGGATATCGTCAGCTTCGTTCTTGATGATAATGGAGGAA 1627 Query 1312 TGCATAAGAACATTCATGAATTTTCTCAAAGCGGATAAAGAGAAGCCTTGTCAAAAGATC 1371 ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| Sbjct 1628 TGCATAAGAACATTCATGAATTTTCTCCAAGCGGATAAAGAAAAGCCTTGTCAGAAGATC 1687 Query 1372 CTCAAAGCCTTTTTTGGGAGAAGTAAACGAGGCTCCGTTGATCCAACCCTTGTCCATCTC 1431 |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 1688 ATCAAAGCCTTTTTTGGGAGAAGTAAACGAGGCCCCGTTGATCCAACCCTTGTACATCTC 1747 Query 1432 ATGAAGAAAGTCAACAAAAAGAAAAAGACGAAGCTGAAAGAGATGCGTCGAGGAGGAAAA 1491 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1748 ATGAAGAAAGTCAACACAAAGAAAAAGACGAAGCTGAAAGAGATGCGTCGAGGAGGGAAA 1807 Query 1492 TACATGAGGAAGAAGAAGATGAGTATAGAGGAAGAAATGGAGATATTGATGGG-TCTAAT 1550 |||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| Sbjct 1808 TACATGAGGAAGAAGAAGATGAGTATAGAGGAGGAAATGGAGATATTGATGGGAT-TAAT 1866 Query 1551 AGACTTGAAAGTGGTGTCAAGAGTATTGAGAATGAAAGAAATGAACGAAGAGAATTTGCA 1610 ||| ||||||||||| |||||||| || || ||||| ||||||||||||||||||||||| Sbjct 1867 AGATTTGAAAGTGGTTTCAAGAGTGTTAAGGATGAATGAAATGAACGAAGAGAATTTGCA 1926 Query 1611 TTGGTGTGAAGAGAAGATGAGCAAAGTTAAAATTATTCAAGGTGGAAAGGTGCTTCAAAG 1670 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1927 TTGGTGTGAAGAGAAGATGAGCAAAGTTAAAATTATTCAAGGTGGAAAGGTGCTTCAAAG 1986 Query 1671 AGATTCCACTCCACTTTTCTTTCCTCCACATTGACCCCACTATTTTAATCTAAT 1724 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1987 AGATTCCACTCCACTTTTCTTTCCTCCACATTGACCCCACTATTCTAATCTAAT 2040 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85240525410 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5