BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926960 Length=341 Score E Sequences producing significant alignments: (Bits) Value AT1G75750.1 | Symbols: GASA1 | GAST1 protein homolog 1 | chr1:2... 512 8e-145 AT2G18420.1 | Symbols: | Gibberellin-regulated family protein ... 141 4e-33 > AT1G75750.1 | Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28441526-28442367 REVERSE LENGTH=667 Length=667 Score = 512 bits (277), Expect = 8e-145 Identities = 320/340 (94%), Gaps = 6/340 (2%) Strand=Plus/Plus Query 5 CTCTCCTTGGAGAATTATGGCTATTTCAAAAGCTCTTATTGCTTCTCTTCTCATATCTCT 64 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 68 CTCTCCTTGGAGAATCATGGCTATTTCAAAAGCTCTTATCGCTTCTCTTCTCATATCTCT 127 Query 65 TCTTGTTCTTCAACTCGTCCAGGCCGATGTCTTCGAAAACTCTCAGAAGAAAAAAGGTTA 124 ||||||||| |||||||||||||| |||| |||||||||| ||||||||||| ||||| Sbjct 128 TCTTGTTCTCCAACTCGTCCAGGCTGATG---TCGAAAACTCACAGAAGAAAAATGGTTA 184 Query 125 CGCAAAGAAGATCGATTGTGGGAGTGCTTGTGTAGCACGGTGCAGGCTCTCGAGGAGGCC 184 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 185 CGCAAAGAAGATCGATTGTGGGAGTGCGTGTGTAGCACGGTGCAGGCTTTCGAGGAGGCC 244 Query 185 GAGGCTGTGTCACAGAGCGTGCGGGACTTGCTGCTACAGGTGCAACTGTGTGCCTCCGGG 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 GAGGCTGTGTCACAGAGCGTGCGGGACTTGCTGCTACAGGTGCAACTGTGTGCCTCCGGG 304 Query 245 CACATACGGTAACTACGACACGTGCCAGTGCTACGCTACCCTCACCACCCACGGTGGACG 304 || ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 305 TACGTACGGAAACTACGACAAGTGCCAGTGCTACGCTAGCCTCACCACCCACGGTGGACG 364 Query 305 CCGCAAGTGCCCATAAGAA-A--CAAAGCTCTTAATAGCT 341 ||||||||||||||||||| | ||||||||||||| ||| Sbjct 365 CCGCAAGTGCCCATAAGAAGAAACAAAGCTCTTAATTGCT 404 > AT2G18420.1 | Symbols: | Gibberellin-regulated family protein | chr2:7993801-7994554 FORWARD LENGTH=565 Length=565 Score = 141 bits (76), Expect = 4e-33 Identities = 137/166 (83%), Gaps = 5/166 (3%) Strand=Plus/Plus Query 162 CGGTGCAGGCTCTCGAGGAGGCCGAGGCTGTGTCACAGAGCGTGCGGGACTTGCTGCTAC 221 |||||||| || ||||| ||||| | || ||||||||||||||||||||||||||| | Sbjct 187 CGGTGCAGTCTTTCGAGTAGGCCAAATCTTTGTCACAGAGCGTGCGGGACTTGCTGCG-C 245 Query 222 -AGGTGCAACTGTGTGCCTCCGGGCACATACGGTAACTACGACACGTG-CCAGTGCTACG 279 ||||||||||| ||| | |||||||||| ||| |||||||||| || || |||||| | Sbjct 246 TAGGTGCAACTGCGTGGCACCGGGCACATCCGGAAACTACGACAAATGTCC-GTGCTATG 304 Query 280 CTACCCTCACCACCCACGGTGGACGCCGCAAGTGCCCATAAGAAAC 325 || ||| ||||||||||| |||||| | ||||| || ||| |||| Sbjct 305 GTAGCCTAACCACCCACGGAGGACGCAGAAAGTGTCCTTAA-AAAC 349 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15934876433 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5