BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg926998 Length=949 Score E Sequences producing significant alignments: (Bits) Value AT1G76080.1 | Symbols: ATCDSP32, CDSP32 | chloroplastic drought... 1447 0.0 > AT1G76080.1 | Symbols: ATCDSP32, CDSP32 | chloroplastic drought-induced stress protein of 32 kD | chr1:28547786-28549419 REVERSE LENGTH=1257 Length=1257 Score = 1447 bits (783), Expect = 0.0 Identities = 895/949 (94%), Gaps = 8/949 (1%) Strand=Plus/Plus Query 1 ATCCTACACACACT--CTC--ACGATGGCCACCGTCGCTAACTTCTTAGCCAAACCAATC 56 |||| ||||||||| | | || |||||||||||||||||||||||||||||||||||| Sbjct 48 ATCCCACACACACTACCACAAACAATGGCCACCGTCGCTAACTTCTTAGCCAAACCAATC 107 Query 57 GCCACCGTAGTCCCACGGCCTTCCTCCGCCGTTGCTTCAACCTCCTCCTTCGTATTCTTT 116 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 108 TCCACCGTAGTCCCACGGCCATCCTCCGCCGTTGCTTCGACCTCCTCCTTCGTATTCTTT 167 Query 117 AACCATAAAACCAACT-CTCTGTTCCGGAGGGAAAACCTCCCGAAAAGACTATTCTCGGC 175 ||||||||||| || | |||||||||||||| ||||||||||||||||| ||||||| || Sbjct 168 AACCATAAAACTAA-TCCTCTGTTCCGGAGGAAAAACCTCCCGAAAAGATTATTCTCCGC 226 Query 176 TGTGAAAGTGAAGGCCGGAGCGGCGTCTCCGGGGAAGGTGGGTACACCCCCGGCGAAAGA 235 |||||| | ||||| ||||||||||||||||| |||||||||||||| |||||||| || Sbjct 227 CGTGAAAATAAAGGCTGGAGCGGCGTCTCCGGGAAAGGTGGGTACACCACCGGCGAATGA 286 Query 236 CGAGAAGGTACAAAAGATTCACAGCGGAGAGGAATTCGACG-AGGCGTTGAAAAATGCAA 294 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | Sbjct 287 CGAGAAGGTACAAAAGATTCACAGCGGAGAGGAATTCGACGTA-GCGTTGAAAAATGCGA 345 Query 295 AGAGCAAACTTGTGGTTGCGGAGTTTGCTACGAGTAAGAGTGATCAGAGTAATAAGATAT 354 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 346 AGAGCAAACTCGTGGTTGCAGAGTTTGCTACGAGTAAGAGTGATCAGAGTAATAAGATAT 405 Query 355 ATCCGTTTATGGTGGAACTGAGCAGGACCTGTAACGACGTCGTTTTCTTGCTCGTCATGG 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 406 ATCCGTTTATGGTGGAACTGAGCAGGACCTGTAACGACGTCGTTTTCTTGCTCGTCATGG 465 Query 415 GTGATGAGTCTGACAAAACCAGAGAACTCTGTCGGAGAGAGAAGATTGAGAAAGTTCCTC 474 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 466 GTGATGAATCTGACAAGACCAGAGAACTCTGTCGGAGAGAGAAGATTGAGAAAGTTCCTC 525 Query 475 ACTTTAGCTTTTATAAGAGCATGGAGAAAATACACGAGGAAGAAGGTATTGAACCGGACC 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 526 ACTTTAGCTTTTATAAGAGCATGGAGAAAATACACGAGGAAGAAGGTATTGAACCGGACC 585 Query 535 AGTTAATGGGAGACGTTCTATACTACGGAGACAACCACTCAGCGGTGGTGCAGCTGCACG 594 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 586 AGTTAATGGGAGACGTTCTATACTACGGAGACAACCACTCTGCGGTGGTGCAGCTGCACG 645 Query 595 GTCGAGCTGACGTGGAGAAGCTAATCGACGAGAATCGCACCGGAGGCAAGCTGATTGTGC 654 | ||| |||||||||| ||||| ||||||||||||||||| |||||||||||||| |||| Sbjct 646 GCCGACCTGACGTGGAAAAGCTGATCGACGAGAATCGCACTGGAGGCAAGCTGATCGTGC 705 Query 655 TCGATGTCGGTCTGAAACATTGTGGTCCTTGCGTTAAGGTGTATCCGACCGTGCTGAAAC 714 | || || ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 706 TTGACGTTGGTCTAAAACATTGTGGTCCTTGCGTTAAAGTGTATCCGACCGTGCTGAAAC 765 Query 715 TGTCCCGGTCAATGTCGGAGACAGTCGTATTCGCTAGAATGAATGGTGACGAGAACGATA 774 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 766 TGTCCCGGTCAATGTCCGAGACAGTCGTATTCGCTAGAATGAACGGTGACGAGAACGATA 825 Query 775 GTTGTATGGAGTTTCTCAAGGACATGAATGTGATTGAAGTTCCAACTTTCTTATTCATTA 834 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct 826 GTTGTATGGAGTTTCTCAAGGACATGAATGTTATCGAAGTTCCAACTTTCTTGTTCATTA 885 Query 835 GAGATGGAGATATTTGTGGCCGATATGTTGGTTCCGGTAAAGGAGAACTCATCGGAGAGA 894 |||| || || ||| ||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 886 GAGACGGCGAGATTCGTGGCCGTTATGTTGGTTCCGGTAAAGGAGAACTCATTGGAGAGA 945 Query 895 TTCTTCGGTACTCAGGTGTTCGTGTCACTTATTAATTTGTATCAAAACT 943 |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 946 TTCTTCGGTACTCAGGCGTTCGTGTCACTTATTAATTTGTATCAAAACT 994 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46416351828 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5